[INFO] fetching crate piscem 0.21.1... [INFO] checking piscem-0.21.1 against df1ae0f7dd168513de2d89beb2cb7a95d4fdc118 for pr-159343-retry [INFO] extracting crate piscem 0.21.1 into /workspace/builds/worker-3-tc1/source [INFO] removed /workspace/builds/worker-3-tc1/source/.cargo/config.toml [INFO] started tweaking crates.io crate piscem 0.21.1 [INFO] finished tweaking crates.io crate piscem 0.21.1 [INFO] tweaked toml for crates.io crate piscem 0.21.1 written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate piscem 0.21.1 on toolchain df1ae0f7dd168513de2d89beb2cb7a95d4fdc118 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+df1ae0f7dd168513de2d89beb2cb7a95d4fdc118" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate piscem 0.21.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+df1ae0f7dd168513de2d89beb2cb7a95d4fdc118" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded sha2-asm v0.6.4 [INFO] [stderr] Downloaded liblzma v0.3.6 [INFO] [stderr] Downloaded path-tools v0.1.0 [INFO] [stderr] Downloaded prepare_fasta v0.2.0 [INFO] [stderr] Downloaded tikv-jemallocator v0.5.4 [INFO] [stderr] Downloaded value-traits-derive v0.2.1 [INFO] [stderr] Downloaded buffer-redux v1.1.0 [INFO] [stderr] Downloaded tiny-dict v0.6.0 [INFO] [stderr] Downloaded thread-priority v3.0.0 [INFO] [stderr] Downloaded partition v0.1.2 [INFO] [stderr] Downloaded value-traits v0.2.1 [INFO] [stderr] Downloaded rdst v0.20.14 [INFO] [stderr] Downloaded block-pseudorand v0.1.2 [INFO] [stderr] Downloaded chiapos-chacha8 v0.1.0 [INFO] [stderr] Downloaded arbitrary-chunks v0.4.1 [INFO] [stderr] Downloaded num-primitive v0.2.1 [INFO] [stderr] Downloaded sshash-lib v0.6.1 [INFO] [stderr] Downloaded mem_dbg v0.4.1 [INFO] [stderr] Downloaded mem_dbg-derive v0.3.1 [INFO] [stderr] Downloaded stable_try_trait_v2 v1.75.1 [INFO] [stderr] Downloaded maybe-dangling v0.1.2 [INFO] [stderr] Downloaded lender-derive v0.1.3 [INFO] [stderr] Downloaded impl-tools v0.11.4 [INFO] [stderr] Downloaded lambert_w v1.2.34 [INFO] [stderr] Downloaded impl-tools-lib v0.11.4 [INFO] [stderr] Downloaded epserde-derive v0.12.5 [INFO] [stderr] Downloaded epserde v0.12.6 [INFO] [stderr] Downloaded needletail v0.6.3 [INFO] [stderr] Downloaded lender v0.6.2 [INFO] [stderr] Downloaded dsi-progress-logger v0.8.7 [INFO] [stderr] Downloaded seedable_hash v0.2.3 [INFO] [stderr] Downloaded wyhash v0.5.0 [INFO] [stderr] Downloaded atomic-primitive v0.1.3 [INFO] [stderr] Downloaded dyn_size_of v0.4.5 [INFO] [stderr] Downloaded rapidhash v1.4.0 [INFO] [stderr] Downloaded bitm v0.5.2 [INFO] [stderr] Downloaded binout v0.3.1 [INFO] [stderr] Downloaded ambassador v0.5.1 [INFO] [stderr] Downloaded rapidhash v4.4.0 [INFO] [stderr] Downloaded stacker v0.1.24 [INFO] [stderr] Downloaded seq_geom_parser v1.1.0 [INFO] [stderr] Downloaded sux v0.14.0 [INFO] [stderr] Downloaded ph-temp v0.12.0 [INFO] [stderr] Downloaded succinctly v0.6.0 [INFO] [stderr] Downloaded tikv-jemalloc-sys v0.5.4+5.3.0-patched [INFO] [stderr] Downloaded niffler v3.0.0 [INFO] [stderr] Downloaded bgzip v0.3.1 [INFO] [stderr] Downloaded mimalloc v0.1.50 [INFO] [stderr] Downloaded paraseq v0.4.10 [INFO] [stderr] Downloaded liblzma-sys v0.3.13 [INFO] [stderr] Downloaded libmimalloc-sys v0.1.47 [INFO] [stderr] Downloaded cf1-rs v0.5.0 [INFO] [stderr] Downloaded seq-hash v0.1.2 [INFO] [stderr] Downloaded mem_dbg v0.3.4 [INFO] [stderr] Downloaded simd-minimizers v2.3.1 [INFO] [stderr] Downloaded mem_dbg-derive v0.2.1 [INFO] [stderr] Downloaded ph v0.11.0 [INFO] [stderr] Downloaded packed-seq v4.4.2 [INFO] [stderr] Downloaded sync-cell-slice v0.9.12 [INFO] [stderr] Downloaded ensure_simd v0.1.0 [INFO] [stderr] Downloaded piscem-rs v0.6.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] 99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d [INFO] running `Command { std: "docker" "start" "99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d" "/opt/rustwide/cargo-home/bin/cargo" "+df1ae0f7dd168513de2d89beb2cb7a95d4fdc118" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d" "/opt/rustwide/cargo-home/bin/cargo" "+df1ae0f7dd168513de2d89beb2cb7a95d4fdc118" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Checking bitflags v2.11.1 [INFO] [stderr] Compiling zerocopy v0.8.48 [INFO] [stderr] Checking regex-automata v0.4.14 [INFO] [stderr] Compiling rustix v1.1.4 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling zerocopy-derive v0.8.48 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling bytemuck_derive v1.10.2 [INFO] [stderr] Checking zlib-rs v0.6.3 [INFO] [stderr] Checking rayon-core v1.13.0 [INFO] [stderr] Compiling object v0.37.3 [INFO] [stderr] Checking getrandom v0.3.4 [INFO] [stderr] Compiling nix v0.30.1 [INFO] [stderr] Compiling memchr v2.8.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling enum-as-inner v0.6.1 [INFO] [stderr] Compiling cc v1.2.61 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking combine v4.6.7 [INFO] [stderr] Checking wyhash v0.5.0 [INFO] [stderr] Compiling darling_core v0.21.3 [INFO] [stderr] Compiling proc-macro-error-attr2 v2.0.0 [INFO] [stderr] Checking rapidhash v1.4.0 [INFO] [stderr] Checking dyn_size_of v0.4.5 [INFO] [stderr] Checking bitm v0.5.2 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Checking seedable_hash v0.2.3 [INFO] [stderr] Checking rayon v1.12.0 [INFO] [stderr] Compiling proc-macro-error2 v2.0.1 [INFO] [stderr] Checking getrandom v0.4.2 [INFO] [stderr] Checking rand_core v0.9.5 [INFO] [stderr] Compiling tracing-attributes v0.1.31 [INFO] [stderr] Compiling mem_dbg-derive v0.3.1 [INFO] [stderr] Checking buffer-redux v1.1.0 [INFO] [stderr] Checking binout v0.3.1 [INFO] [stderr] Checking flate2 v1.1.9 [INFO] [stderr] Checking jiff v0.2.24 [INFO] [stderr] Checking xxhash-rust v0.8.15 [INFO] [stderr] Compiling itertools v0.10.5 [INFO] [stderr] Checking thiserror v1.0.69 [INFO] [stderr] Checking sysctl v0.6.0 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking bytemuck v1.25.0 [INFO] [stderr] Compiling impl-tools-lib v0.11.4 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking num-format v0.4.4 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Compiling clap_derive v4.6.1 [INFO] [stderr] Compiling lender-derive v0.1.3 [INFO] [stderr] Compiling value-traits-derive v0.2.1 [INFO] [stderr] Compiling mem_dbg-derive v0.2.1 [INFO] [stderr] Compiling zstd-sys v2.0.16+zstd.1.5.7 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling liblzma-sys v0.3.13 [INFO] [stderr] Checking voracious_radix_sort v1.2.0 [INFO] [stderr] Checking tracing v0.1.44 [INFO] [stderr] Checking terminal_size v0.4.4 [INFO] [stderr] Checking clap_builder v4.6.0 [INFO] [stderr] Compiling stacker v0.1.24 [INFO] [stderr] Compiling epserde-derive v0.12.5 [INFO] [stderr] Checking regex v1.12.3 [INFO] [stderr] Checking sysinfo v0.36.1 [INFO] [stderr] Checking stable_try_trait_v2 v1.75.1 [INFO] [stderr] Checking arbitrary-chunks v0.4.1 [INFO] [stderr] Checking maybe-dangling v0.1.2 [INFO] [stderr] Checking partition v0.1.2 [INFO] [stderr] Checking fallible-iterator v0.3.0 [INFO] [stderr] Checking env_filter v1.0.1 [INFO] [stderr] Checking pluralizer v0.5.0 [INFO] [stderr] Checking aliasable v0.1.3 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking dsi-progress-logger v0.8.7 [INFO] [stderr] Checking tempfile v3.27.0 [INFO] [stderr] Checking rdst v0.20.14 [INFO] [stderr] Compiling darling_macro v0.21.3 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling impl-tools v0.11.4 [INFO] [stderr] Checking lender v0.6.2 [INFO] [stderr] Checking value-traits v0.2.1 [INFO] [stderr] Checking mem_dbg v0.3.4 [INFO] [stderr] Compiling ambassador v0.5.1 [INFO] [stderr] Compiling darling v0.21.3 [INFO] [stderr] Compiling derive_setters v0.1.9 [INFO] [stderr] Compiling sha2-asm v0.6.4 [INFO] [stderr] Compiling libmimalloc-sys v0.1.47 [INFO] [stderr] Checking wide v0.7.33 [INFO] [stderr] Checking lambert_w v1.2.34 [INFO] [stderr] Checking succinctly v0.6.0 [INFO] [stderr] Checking parking_lot_core v0.9.12 [INFO] [stderr] Checking rand v0.10.1 [INFO] [stderr] Compiling toml_datetime v0.6.11 [INFO] [stderr] Compiling serde_spanned v0.6.9 [INFO] [stderr] Checking thread-priority v3.0.0 [INFO] [stderr] Checking clap v4.6.1 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Checking atomic-primitive v0.1.3 [INFO] [stderr] Checking ensure_simd v0.1.0 [INFO] [stderr] Compiling ar_archive_writer v0.5.1 [INFO] [stderr] Compiling toml_write v0.1.2 [INFO] [stderr] Checking sync-cell-slice v0.9.12 [INFO] [stderr] Compiling winnow v0.7.15 [INFO] [stderr] Checking num-primitive v0.2.1 [INFO] [stderr] Checking env_logger v0.11.10 [INFO] [stderr] Checking ph-temp v0.12.0 [INFO] [stderr] Compiling prettyplease v0.2.37 [INFO] [stderr] Compiling derivative v2.2.0 [INFO] [stderr] Compiling psm v0.1.31 [INFO] [stderr] Checking bzip2 v0.5.2 [INFO] [stderr] Checking mmap-rs v0.7.0 [INFO] [stderr] Checking matchers v0.2.0 [INFO] [stderr] Checking bgzip v0.3.1 [INFO] [stderr] Checking tracing-log v0.2.0 [INFO] [stderr] Checking rapidhash v4.4.0 [INFO] [stderr] Checking memmap2 v0.9.10 [INFO] [stderr] Compiling seq-macro v0.3.6 [INFO] [stderr] Checking unicode-ident v1.0.24 [INFO] [stderr] Checking yansi v1.0.1 [INFO] [stderr] Checking chumsky v0.12.0 [INFO] [stderr] Checking tracing-subscriber v0.3.23 [INFO] [stderr] Checking console v0.16.3 [INFO] [stderr] Checking digest v0.10.7 [INFO] [stderr] Checking ariadne v0.5.1 [INFO] [stderr] Checking ppv-lite86 v0.2.21 [INFO] [stderr] Checking mem_dbg v0.4.1 [INFO] [stderr] Checking parking_lot v0.12.5 [INFO] [stderr] Checking num_cpus v1.17.0 [INFO] [stderr] Compiling bon-macros v3.9.1 [INFO] [stderr] Checking crossbeam-queue v0.3.12 [INFO] [stderr] Checking unit-prefix v0.5.2 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Checking sha2 v0.10.9 [INFO] [stderr] Checking indicatif v0.18.4 [INFO] [stderr] Checking crossbeam v0.8.4 [INFO] [stderr] Checking mimalloc v0.1.50 [INFO] [stderr] Checking rand_chacha v0.9.0 [INFO] [stderr] Checking ph v0.11.0 [INFO] [stderr] Checking path-tools v0.1.0 [INFO] [stderr] Checking rand v0.9.4 [INFO] [stderr] Checking epserde v0.12.6 [INFO] [stderr] Compiling toml_edit v0.22.27 [INFO] [stderr] Checking dashmap v6.1.0 [INFO] [stderr] Checking packed-seq v4.4.2 [INFO] [stderr] Checking liblzma v0.3.6 [INFO] [stderr] Checking seq-hash v0.1.2 [INFO] [stderr] Checking simd-minimizers v2.3.1 [INFO] [stderr] Compiling toml v0.8.23 [INFO] [stderr] Compiling piscem v0.21.1 (/opt/rustwide/workdir) [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Checking zstd v0.13.3 [INFO] [stderr] Checking bon v3.9.1 [INFO] [stderr] Checking needletail v0.6.3 [INFO] [stderr] Checking sux v0.14.0 [INFO] [stderr] Checking niffler v3.0.0 [INFO] [stderr] Checking seq_geom_parser v1.1.0 [INFO] [stderr] Checking paraseq v0.4.10 [INFO] [stderr] Checking cf1-rs v0.5.0 [INFO] [stderr] Checking prepare_fasta v0.2.0 [INFO] [stderr] Checking sshash-lib v0.6.1 [INFO] [stderr] Checking tiny-dict v0.6.0 [INFO] [stderr] Checking piscem-rs v0.6.3 [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 24s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2` [INFO] running `Command { std: "docker" "inspect" "99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d", kill_on_drop: false }` [INFO] [stdout] 99aa35feb955e5230dd3d9836c04f82fb44bcfd8e0ed25e72b5a1e50e14ba04d