[INFO] cloning repository https://github.com/Clinical-Genomics/scout_loader
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Clinical-Genomics/scout_loader" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1c7d5c98dea8578ff0aaaaaf6b1c7a9a3969772f
[INFO] checking Clinical-Genomics/scout_loader/1c7d5c98dea8578ff0aaaaaf6b1c7a9a3969772f against 24e1a22664233bce1f9b5dc6eee7c1f74327e28c for pr-159343-retry
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Clinical-Genomics/scout_loader
[INFO] finished tweaking git repo https://github.com/Clinical-Genomics/scout_loader
[INFO] tweaked toml for git repo https://github.com/Clinical-Genomics/scout_loader written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Clinical-Genomics/scout_loader on toolchain 24e1a22664233bce1f9b5dc6eee7c1f74327e28c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/Clinical-Genomics/scout_loader already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking Clinical-Genomics/scout_loader/1c7d5c98dea8578ff0aaaaaf6b1c7a9a3969772f against 24e1a22664233bce1f9b5dc6eee7c1f74327e28c for pr-159343-retry
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Clinical-Genomics/scout_loader
[INFO] finished tweaking git repo https://github.com/Clinical-Genomics/scout_loader
[INFO] tweaked toml for git repo https://github.com/Clinical-Genomics/scout_loader written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Clinical-Genomics/scout_loader on toolchain 24e1a22664233bce1f9b5dc6eee7c1f74327e28c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/Clinical-Genomics/scout_loader already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking Clinical-Genomics/scout_loader/1c7d5c98dea8578ff0aaaaaf6b1c7a9a3969772f against 24e1a22664233bce1f9b5dc6eee7c1f74327e28c for pr-159343-retry
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Clinical-Genomics/scout_loader
[INFO] finished tweaking git repo https://github.com/Clinical-Genomics/scout_loader
[INFO] tweaked toml for git repo https://github.com/Clinical-Genomics/scout_loader written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Clinical-Genomics/scout_loader on toolchain 24e1a22664233bce1f9b5dc6eee7c1f74327e28c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/Clinical-Genomics/scout_loader already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking Clinical-Genomics/scout_loader/1c7d5c98dea8578ff0aaaaaf6b1c7a9a3969772f against 24e1a22664233bce1f9b5dc6eee7c1f74327e28c for pr-159343-retry
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Clinical-Genomics/scout_loader
[INFO] finished tweaking git repo https://github.com/Clinical-Genomics/scout_loader
[INFO] tweaked toml for git repo https://github.com/Clinical-Genomics/scout_loader written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Clinical-Genomics/scout_loader on toolchain 24e1a22664233bce1f9b5dc6eee7c1f74327e28c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/Clinical-Genomics/scout_loader already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded regex v1.13.0
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded zerocopy-derive v0.8.54
[INFO] [stderr]   Downloaded rust-htslib v1.0.1
[INFO] [stderr]   Downloaded bson v2.15.0
[INFO] [stderr]   Downloaded zerocopy v0.8.54
[INFO] [stderr]   Downloaded regex-automata v0.4.15
[INFO] [stderr]   Downloaded curl-sys v0.4.90+curl-8.21.0
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c
[INFO] running `Command { std: "docker" "start" "aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c" "/opt/rustwide/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c" "/opt/rustwide/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling quote v1.0.46
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling zerocopy v0.8.54
[INFO] [stderr]     Checking memchr v2.8.3
[INFO] [stderr]     Checking litemap v0.8.2
[INFO] [stderr]     Checking writeable v0.6.3
[INFO] [stderr]     Checking smallvec v1.15.2
[INFO] [stderr]    Compiling icu_normalizer_data v2.2.0
[INFO] [stderr]     Checking typenum v1.20.1
[INFO] [stderr]    Compiling icu_properties_data v2.2.0
[INFO] [stderr]    Compiling jobserver v0.1.35
[INFO] [stderr]     Checking getrandom v0.2.17
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]     Checking errno v0.3.14
[INFO] [stderr]    Compiling regex-syntax v0.8.11
[INFO] [stderr]     Checking signal-hook-registry v1.4.8
[INFO] [stderr]     Checking tinyvec v1.12.0
[INFO] [stderr]     Checking socket2 v0.6.5
[INFO] [stderr]     Checking mio v1.2.2
[INFO] [stderr]    Compiling semver-parser v0.7.0
[INFO] [stderr]    Compiling either v1.16.0
[INFO] [stderr]     Checking bytes v1.12.1
[INFO] [stderr]    Compiling cc v1.2.66
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling syn v2.0.118
[INFO] [stderr]     Checking futures-io v0.3.32
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]     Checking form_urlencoded v1.2.2
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking unicode-normalization v0.1.25
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking log v0.4.33
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling bitflags v2.13.0
[INFO] [stderr]     Checking futures-task v0.3.32
[INFO] [stderr]    Compiling rustversion v1.0.23
[INFO] [stderr]     Checking slab v0.4.12
[INFO] [stderr]     Checking generic-array v0.14.7
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling getrandom v0.4.3
[INFO] [stderr]     Checking unicode-bidi v0.3.18
[INFO] [stderr]    Compiling zmij v1.0.23
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]     Checking rand_core v0.9.5
[INFO] [stderr]    Compiling num-conv v0.2.2
[INFO] [stderr]    Compiling time-core v0.1.9
[INFO] [stderr]     Checking matches v0.1.10
[INFO] [stderr]    Compiling serde_json v1.0.150
[INFO] [stderr]     Checking anstyle-parse v1.0.0
[INFO] [stderr]     Checking idna v0.2.3
[INFO] [stderr]    Compiling rustc_version_runtime v0.2.1
[INFO] [stderr]    Compiling openssl-src v300.6.1+3.6.3
[INFO] [stderr]    Compiling cmake v0.1.58
[INFO] [stderr]     Checking block-buffer v0.10.4
[INFO] [stderr]     Checking crypto-common v0.1.7
[INFO] [stderr]    Compiling regex-automata v0.4.15
[INFO] [stderr]    Compiling time-macros v0.2.31
[INFO] [stderr]     Checking digest v0.10.7
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking futures-channel v0.3.32
[INFO] [stderr]     Checking ipnet v2.12.0
[INFO] [stderr]     Checking colorchoice v1.0.5
[INFO] [stderr]     Checking anstyle v1.0.14
[INFO] [stderr]     Checking itoa v1.0.18
[INFO] [stderr]     Checking linked-hash-map v0.5.6
[INFO] [stderr]     Checking deranged v0.5.8
[INFO] [stderr]     Checking data-encoding v2.11.0
[INFO] [stderr]     Checking anstream v1.0.0
[INFO] [stderr]     Checking bitvec v1.1.1
[INFO] [stderr]     Checking lru-cache v0.1.2
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]     Checking uuid v1.24.0
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr]    Compiling openssl-sys v0.9.117
[INFO] [stderr]    Compiling libz-sys v1.1.29
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.90+curl-8.21.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr] error: could not compile `zerocopy` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/24e1a22664233bce1f9b5dc6eee7c1f74327e28c/bin/rustc --crate-name zerocopy --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/zerocopy-0.8.54/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="simd"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("__internal_use_only_features_that_work_on_stable", "alloc", "derive", "float-nightly", "simd", "simd-nightly", "std", "zerocopy-derive"))' -C metadata=4f4e57c4792b83fb -C extra-filename=-7a36d67d81776ba9 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid --check-cfg 'cfg(no_zerocopy_simd_x86_avx12_1_89_0)' --check-cfg 'cfg(rust, values("1.89.0"))' --check-cfg 'cfg(no_zerocopy_core_error_1_81_0)' --check-cfg 'cfg(rust, values("1.81.0"))' --check-cfg 'cfg(no_zerocopy_diagnostic_on_unimplemented_1_78_0)' --check-cfg 'cfg(rust, values("1.78.0"))' --check-cfg 'cfg(no_zerocopy_generic_bounds_in_const_fn_1_61_0)' --check-cfg 'cfg(rust, values("1.61.0"))' --check-cfg 'cfg(no_zerocopy_target_has_atomics_1_60_0)' --check-cfg 'cfg(rust, values("1.60.0"))' --check-cfg 'cfg(no_zerocopy_aarch64_simd_1_59_0)' --check-cfg 'cfg(rust, values("1.59.0"))' --check-cfg 'cfg(no_zerocopy_aarch64_simd_be_1_87_0)' --check-cfg 'cfg(rust, values("1.87.0"))' --check-cfg 'cfg(no_zerocopy_panic_in_const_and_vec_try_reserve_1_57_0)' --check-cfg 'cfg(rust, values("1.57.0"))' --check-cfg 'cfg(doc_cfg)' --check-cfg 'cfg(kani)' --check-cfg 'cfg(__ZEROCOPY_INTERNAL_USE_ONLY_NIGHTLY_FEATURES_IN_TESTS)' --check-cfg 'cfg(__ZEROCOPY_INTERNAL_USE_ONLY_DEV_MODE)' --check-cfg 'cfg(coverage_nightly)' --check-cfg 'cfg(zerocopy_inline_always)' --check-cfg 'cfg(zerocopy_unstable_ptr)' --check-cfg 'cfg(zerocopy_unstable_linux)' --check-cfg 'cfg(no_fp_fmt_parse)'` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/24e1a22664233bce1f9b5dc6eee7c1f74327e28c/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/syn-2.0.118/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="fold"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="visit"' --cfg 'feature="visit-mut"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("clone-impls", "default", "derive", "extra-traits", "fold", "full", "parsing", "printing", "proc-macro", "test", "visit", "visit-mut"))' -C metadata=eb49bd5d46bf93de -C extra-filename=-96e082687b56cdd9 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-d4cb564e807a9cd7.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-12a774c18bdf157c.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-8c98a1a0e58216a9.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c", kill_on_drop: false }`
[INFO] [stdout] aff3af780f696ac55d30c3517f088f9ecc937c278204a67fcff0882a829c578c