[INFO] fetching crate piscem-rs 0.10.0...
[INFO] checking piscem-rs-0.10.0 against 656a9da186dacaf3bf8f7f7296a825d256cb4ae3 for pr-158915
[INFO] extracting crate piscem-rs 0.10.0 into /workspace/builds/worker-3-tc1/source
[INFO] started tweaking crates.io crate piscem-rs 0.10.0
[INFO] finished tweaking crates.io crate piscem-rs 0.10.0
[INFO] tweaked toml for crates.io crate piscem-rs 0.10.0 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate piscem-rs 0.10.0 on toolchain 656a9da186dacaf3bf8f7f7296a825d256cb4ae3
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+656a9da186dacaf3bf8f7f7296a825d256cb4ae3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate piscem-rs 0.10.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+656a9da186dacaf3bf8f7f7296a825d256cb4ae3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: explicit `package.readme` can be inferred
[INFO] [stderr]    --> Cargo.toml:138:1
[INFO] [stderr]     |
[INFO] [stderr] 138 | readme = "README.md"
[INFO] [stderr]     | ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `cargo::manual_readme` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.readme`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]    --> Cargo.toml:135:12
[INFO] [stderr]     |
[INFO] [stderr] 135 | homepage = "https://github.com/COMBINE-lab/piscem-rs"
[INFO] [stderr]     |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 139 | repository = "https://github.com/COMBINE-lab/piscem-rs"
[INFO] [stderr]     |              ------------------------------------------
[INFO] [stderr]     |
[INFO] [stderr]     = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `piscem-rs` (manifest) generated 2 warnings
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded value-traits v0.2.1
[INFO] [stderr]   Downloaded value-traits-derive v0.2.1
[INFO] [stderr]   Downloaded tiny-dict v0.7.1
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[INFO] [stderr]   Downloaded stable_try_trait_v2 v1.75.1
[INFO] [stderr]   Downloaded block-pseudorand v0.1.2
[INFO] [stderr]   Downloaded sshash-lib v0.7.1
[INFO] [stderr]   Downloaded nanorand v0.6.1
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[INFO] [stderr]   Downloaded binout v0.3.2
[INFO] [stderr]   Downloaded lender-derive v0.1.3
[INFO] [stderr]   Downloaded arbitrary-chunks v0.4.1
[INFO] [stderr]   Downloaded mem_dbg-derive v0.3.4
[INFO] [stderr]   Downloaded partition v0.1.2
[INFO] [stderr]   Downloaded atomic-primitive v0.1.4
[INFO] [stderr]   Downloaded seedable_hash v0.2.3
[INFO] [stderr]   Downloaded dyn_size_of v0.4.5
[INFO] [stderr]   Downloaded cpu-time v1.0.0
[INFO] [stderr]   Downloaded impl-tools-lib v0.11.4
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[INFO] [stderr]   Downloaded epserde-derive v0.12.5
[INFO] [stderr]   Downloaded maybe-dangling v0.1.2
[INFO] [stderr]   Downloaded noodles-core v0.20.0
[INFO] [stderr]   Downloaded dsi-progress-logger v0.8.9
[INFO] [stderr]   Downloaded mmap-rs v0.7.0
[INFO] [stderr]   Downloaded derive_setters v0.1.9
[INFO] [stderr]   Downloaded bitm v0.5.2
[INFO] [stderr]   Downloaded buffer-redux v1.1.0
[INFO] [stderr]   Downloaded libradicl-macros v0.18.0
[INFO] [stderr]   Downloaded num-primitive v0.2.1
[INFO] [stderr]   Downloaded scroll v0.13.0
[INFO] [stderr]   Downloaded noodles v0.115.0
[INFO] [stderr]   Downloaded thread-priority v3.1.1
[INFO] [stderr]   Downloaded rdst v0.20.14
[INFO] [stderr]   Downloaded lambert_w v1.2.34
[INFO] [stderr]   Downloaded ambassador v0.5.1
[INFO] [stderr]   Downloaded liblzma v0.3.6
[INFO] [stderr]   Downloaded seq_geom_parser v1.1.0
[INFO] [stderr]   Downloaded ariadne v0.5.1
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded bgzip v0.3.1
[INFO] [stderr]   Downloaded noodles-csi v0.60.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.51.0
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[INFO] [stderr]   Downloaded thread-broker v0.1.0
[INFO] [stderr]   Downloaded libz-rs-sys v0.6.7
[INFO] [stderr]   Downloaded educe v0.7.6
[INFO] [stderr]   Downloaded noodles-bam v0.94.0
[INFO] [stderr]   Downloaded mem_dbg v0.4.4
[INFO] [stderr]   Downloaded noodles-sam v0.89.0
[INFO] [stderr]   Downloaded lender v0.6.2
[INFO] [stderr]   Downloaded libradicl v0.18.0
[INFO] [stderr]   Downloaded paraseq-temp v0.5.0-pre.2
[INFO] [stderr]   Downloaded rapidgzip-core v0.3.1
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[INFO] [stderr]   Downloaded needletail v0.7.3
[INFO] [stderr]   Downloaded sux v0.14.0
[INFO] [stderr]   Downloaded succinctly v0.6.0
[INFO] [stderr]   Downloaded tikv-jemalloc-sys v0.5.4+5.3.0-patched
[INFO] [stderr]   Downloaded liblzma-sys v0.3.13
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd
[INFO] running `Command { std: "docker" "start" "b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd" "/opt/rustwide/cargo-home/bin/cargo" "+656a9da186dacaf3bf8f7f7296a825d256cb4ae3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd" "/opt/rustwide/cargo-home/bin/cargo" "+656a9da186dacaf3bf8f7f7296a825d256cb4ae3" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: explicit `package.readme` can be inferred
[INFO] [stderr]    --> Cargo.toml:138:1
[INFO] [stderr]     |
[INFO] [stderr] 138 | readme = "README.md"
[INFO] [stderr]     | ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `cargo::manual_readme` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.readme`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]    --> Cargo.toml:135:12
[INFO] [stderr]     |
[INFO] [stderr] 135 | homepage = "https://github.com/COMBINE-lab/piscem-rs"
[INFO] [stderr]     |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 139 | repository = "https://github.com/COMBINE-lab/piscem-rs"
[INFO] [stderr]     |              ------------------------------------------
[INFO] [stderr]     |
[INFO] [stderr]     = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `piscem-rs` (manifest) generated 2 warnings
[INFO] [stderr]    Compiling syn v2.0.119
[INFO] [stderr]    Compiling syn v3.0.4
[INFO] [stderr]     Checking zlib-rs v0.6.7
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking regex-automata v0.4.18
[INFO] [stderr]     Checking crossbeam-channel v0.5.16
[INFO] [stderr]     Checking indexmap v2.14.1
[INFO] [stderr]    Compiling nix v0.30.1
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]    Compiling liblzma-sys v0.3.13
[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]     Checking combine v4.6.8
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking arrayvec v0.7.8
[INFO] [stderr]     Checking jiff v0.2.35
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]     Checking getrandom v0.4.3
[INFO] [stderr]     Checking liblzma v0.3.6
[INFO] [stderr]    Compiling psm v0.1.32
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling either v1.18.0
[INFO] [stderr]     Checking chacha20 v0.10.2
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking num-format v0.4.4
[INFO] [stderr]    Compiling stacker v0.1.25
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]     Checking bstr v1.13.1
[INFO] [stderr]     Checking sysinfo v0.36.1
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking arbitrary-chunks v0.4.1
[INFO] [stderr]     Checking stable_try_trait_v2 v1.75.1
[INFO] [stderr]     Checking flate2 v1.1.10
[INFO] [stderr]     Checking xxhash-rust v0.8.18
[INFO] [stderr]     Checking libbz2-rs-sys v0.2.5
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[INFO] [stderr]     Checking partition v0.1.2
[INFO] [stderr]     Checking dyn_size_of v0.4.5
[INFO] [stderr]     Checking maybe-dangling v0.1.2
[INFO] [stderr]     Checking seedable_hash v0.2.3
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]     Checking noodles-core v0.20.0
[INFO] [stderr]     Checking lambert_w v1.2.34
[INFO] [stderr]     Checking bitm v0.5.2
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]     Checking num-integer v0.1.47
[INFO] [stderr]     Checking bzip2 v0.6.1
[INFO] [stderr]     Checking rand v0.10.2
[INFO] [stderr]     Checking thread-priority v3.1.1
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.49
[INFO] [stderr]     Checking buffer-redux v1.1.0
[INFO] [stderr]     Checking num-primitive v0.2.1
[INFO] [stderr]     Checking bit-vec v0.10.1
[INFO] [stderr]     Checking voracious_radix_sort v1.2.0
[INFO] [stderr]     Checking noodles-bgzf v0.51.0
[INFO] [stderr]     Checking rdst v0.20.14
[INFO] [stderr]     Checking sync-cell-slice v0.9.14
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking binout v0.3.2
[INFO] [stderr]     Checking atomic-primitive v0.1.4
[INFO] [stderr]     Checking noodles-csi v0.60.0
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]     Checking bzip2 v0.5.2
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]     Checking rapidhash v4.5.1
[INFO] [stderr]     Checking crossbeam-queue v0.3.13
[INFO] [stderr]     Checking memmap2 v0.9.11
[INFO] [stderr]     Checking chumsky v0.12.0
[INFO] [stderr]     Checking ariadne v0.5.1
[INFO] [stderr]     Checking clap_builder v4.6.6
[INFO] [stderr]     Checking dashmap v6.2.1
[INFO] [stderr]     Checking console v0.16.4
[INFO] [stderr]     Checking num-bigint v0.4.8
[INFO] [stderr]     Checking noodles-sam v0.89.0
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]     Checking tracing-log v0.2.0
[INFO] [stderr]     Checking cpu-time v1.0.0
[INFO] [stderr]    Compiling snap v1.1.2
[INFO] [stderr]     Checking indicatif v0.18.6
[INFO] [stderr]     Checking crossbeam v0.8.4
[INFO] [stderr]     Checking num-iter v0.1.46
[INFO] [stderr]     Checking twox-hash v2.1.4
[INFO] [stderr]     Checking itertools v0.15.0
[INFO] [stderr]     Checking regex v1.13.1
[INFO] [stderr]     Checking matchers v0.2.0
[INFO] [stderr]     Checking lz4_flex v0.14.0
[INFO] [stderr]     Checking scroll v0.13.0
[INFO] [stderr]     Checking env_filter v2.0.0
[INFO] [stderr]     Checking pluralizer v0.5.0
[INFO] [stderr]     Checking ph-temp v0.12.0
[INFO] [stderr]     Checking dsi-progress-logger v0.8.9
[INFO] [stderr]     Checking env_logger v0.11.11
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking num v0.4.3
[INFO] [stderr]    Compiling derivative v2.2.0
[INFO] [stderr]     Checking noodles-bam v0.94.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.20
[INFO] [stderr]    Compiling darling_core v0.21.3
[INFO] [stderr]    Compiling bytemuck_derive v1.12.0
[INFO] [stderr]    Compiling impl-tools-lib v0.11.4
[INFO] [stderr]    Compiling serde_derive v1.0.229
[INFO] [stderr]    Compiling enum-ordinalize-derive v4.4.2
[INFO] [stderr]    Compiling clap_derive v4.6.4
[INFO] [stderr]     Checking mimalloc v0.1.52
[INFO] [stderr]     Checking noodles v0.115.0
[INFO] [stderr]    Compiling libradicl-macros v0.18.0
[INFO] [stderr]    Compiling enum-ordinalize v4.4.2
[INFO] [stderr]    Compiling educe v0.7.6
[INFO] [stderr]     Checking bytemuck v1.25.2
[INFO] [stderr]     Checking thiserror v2.0.20
[INFO] [stderr]     Checking succinctly v0.6.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling enum-as-inner v0.6.1
[INFO] [stderr]    Compiling zerocopy-derive v0.8.56
[INFO] [stderr]    Compiling tracing-attributes v0.1.31
[INFO] [stderr]    Compiling mem_dbg-derive v0.3.4
[INFO] [stderr]    Compiling sealed v0.6.0
[INFO] [stderr]    Compiling lender-derive v0.1.3
[INFO] [stderr]    Compiling value-traits-derive v0.2.1
[INFO] [stderr]    Compiling epserde-derive v0.12.5
[INFO] [stderr]    Compiling ambassador v0.5.1
[INFO] [stderr]    Compiling impl-tools v0.11.4
[INFO] [stderr]     Checking lender v0.6.2
[INFO] [stderr]    Compiling darling_macro v0.21.3
[INFO] [stderr]    Compiling darling v0.21.3
[INFO] [stderr]    Compiling derive_setters v0.1.9
[INFO] [stderr]     Checking clap v4.6.6
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]     Checking value-traits v0.2.1
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking sysctl v0.6.0
[INFO] [stderr]     Checking bgzip v0.3.1
[INFO] [stderr]     Checking tracing v0.1.44
[INFO] [stderr]     Checking mmap-rs v0.7.0
[INFO] [stderr]     Checking tracing-subscriber v0.3.23
[INFO] [stderr]     Checking zerocopy v0.8.56
[INFO] [stderr]     Checking serde v1.0.229
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking thread-broker v0.1.0
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]     Checking mem_dbg v0.4.4
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]     Checking needletail v0.7.3
[INFO] [stderr]     Checking niffler v3.0.0
[INFO] [stderr]     Checking paraseq-temp v0.5.0-pre.2
[INFO] [stderr]     Checking epserde v0.12.6
[INFO] [stderr]     Checking seq_geom_parser v1.1.0
[INFO] [stderr]     Checking sux v0.14.0
[INFO] [stderr]     Checking ahash v0.8.12
[INFO] [stderr]     Checking libradicl v0.18.0
[INFO] [stderr]     Checking sshash-lib v0.7.1
[INFO] [stderr]     Checking tiny-dict v0.7.1
[INFO] [stderr]     Checking piscem-rs v0.10.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 06s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 3`
[INFO] running `Command { std: "docker" "inspect" "b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd", kill_on_drop: false }`
[INFO] [stdout] b6843efc9dbd08c85f58985e8ae8e0849bae8adaaca6f0ee5d6436e55cd55bfd
