[INFO] cloning repository https://github.com/SciLifeLab/umi-transfer
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/SciLifeLab/umi-transfer" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSciLifeLab%2Fumi-transfer", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSciLifeLab%2Fumi-transfer'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 9ef46b8c19c0242bd1eaaf0e2f13b1571e12658a
[INFO] checking SciLifeLab/umi-transfer against e3607d549209cc9fdfe7e907123b4185210e2c2b for pr-158915
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSciLifeLab%2Fumi-transfer" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/SciLifeLab/umi-transfer
[INFO] finished tweaking git repo https://github.com/SciLifeLab/umi-transfer
[INFO] tweaked toml for git repo https://github.com/SciLifeLab/umi-transfer written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/SciLifeLab/umi-transfer on toolchain e3607d549209cc9fdfe7e907123b4185210e2c2b
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e3607d549209cc9fdfe7e907123b4185210e2c2b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/SciLifeLab/umi-transfer already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e3607d549209cc9fdfe7e907123b4185210e2c2b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3
[INFO] running `Command { std: "docker" "start" "d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3" "/opt/rustwide/cargo-home/bin/cargo" "+e3607d549209cc9fdfe7e907123b4185210e2c2b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3" "/opt/rustwide/cargo-home/bin/cargo" "+e3607d549209cc9fdfe7e907123b4185210e2c2b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.177
[INFO] [stderr]    Compiling quote v1.0.41
[INFO] [stderr]    Compiling libm v0.2.15
[INFO] [stderr]     Checking memchr v2.7.6
[INFO] [stderr]     Checking regex-syntax v0.8.8
[INFO] [stderr]    Compiling find-msvc-tools v0.1.4
[INFO] [stderr]    Compiling zerocopy v0.8.27
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]     Checking bitflags v2.10.0
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling rustix v1.1.2
[INFO] [stderr]     Checking anstyle v1.0.13
[INFO] [stderr]     Checking bytemuck v1.24.0
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling cc v1.2.44
[INFO] [stderr]    Compiling thiserror v2.0.17
[INFO] [stderr]     Checking log v0.4.28
[INFO] [stderr]     Checking linux-raw-sys v0.11.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling syn v2.0.108
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]     Checking crossbeam-epoch v0.9.18
[INFO] [stderr]     Checking is_ci v1.2.0
[INFO] [stderr]     Checking simd-adler32 v0.3.7
[INFO] [stderr]     Checking anstyle-query v1.1.4
[INFO] [stderr]     Checking hashbrown v0.16.0
[INFO] [stderr]     Checking predicates-core v1.0.9
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]    Compiling anyhow v1.0.100
[INFO] [stderr]     Checking anstream v0.6.21
[INFO] [stderr]     Checking crossbeam-deque v0.8.6
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]     Checking hashbrown v0.15.5
[INFO] [stderr]    Compiling nix v0.30.1
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]     Checking indexmap v2.12.0
[INFO] [stderr]     Checking crc32fast v1.5.0
[INFO] [stderr]     Checking csv-core v0.1.13
[INFO] [stderr]    Compiling owo-colors v4.2.3
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking difflib v0.4.0
[INFO] [stderr]     Checking termtree v0.5.1
[INFO] [stderr]    Compiling doc-comment v0.3.4
[INFO] [stderr]     Checking fixedbitset v0.5.7
[INFO] [stderr]     Checking normalize-line-endings v0.3.0
[INFO] [stderr]     Checking futures-core v0.3.31
[INFO] [stderr]     Checking clap_lex v0.7.6
[INFO] [stderr]     Checking futures-sink v0.3.31
[INFO] [stderr]    Compiling libz-ng-sys v1.1.22
[INFO] [stderr]    Compiling libdeflate-sys v1.25.0
[INFO] [stderr]     Checking predicates-tree v1.0.12
[INFO] [stderr]     Checking clap_builder v4.5.51
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]     Checking regex-automata v0.4.13
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking getrandom v0.2.16
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking nanorand v0.7.0
[INFO] [stderr]     Checking float-cmp v0.10.0
[INFO] [stderr]     Checking is-terminal v0.4.17
[INFO] [stderr]     Checking num_cpus v1.17.0
[INFO] [stderr]     Checking supports-color v2.1.0
[INFO] [stderr]     Checking petgraph v0.8.3
[INFO] [stderr]     Checking tempfile v3.23.0
[INFO] [stderr]     Checking ordered-float v5.1.0
[INFO] [stderr]     Checking flume v0.11.1
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]     Checking core_affinity v0.8.3
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking console v0.16.1
[INFO] [stderr]     Checking supports-color v3.0.2
[INFO] [stderr]     Checking simba v0.9.1
[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking shell-words v1.1.0
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking bytes v1.10.1
[INFO] [stderr]    Compiling assert_cmd v2.1.1
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]     Checking dialoguer v0.12.0
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking csv v1.4.0
[INFO] [stderr]     Checking wait-timeout v0.2.1
[INFO] [stderr]     Checking comma v1.0.0
[INFO] [stderr]    Compiling derefable v0.1.0
[INFO] [stderr]     Checking file-format v0.28.0
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]     Checking regex v1.12.2
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]     Checking predicates v3.1.3
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v2.0.17
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling clap_derive v4.5.49
[INFO] [stderr]    Compiling getset v0.1.6
[INFO] [stderr]     Checking globset v0.4.18
[INFO] [stderr]     Checking ignore v0.4.25
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking globwalk v0.9.1
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking assert_fs v1.1.3
[INFO] [stderr]     Checking rexpect v0.6.2
[INFO] [stderr]     Checking clap v4.5.51
[INFO] [stderr]     Checking libdeflater v1.25.0
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking nalgebra v0.33.2
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.10.1
[INFO] [stderr]     Checking flate2 v1.1.5
[INFO] [stderr]     Checking gzp v2.0.0
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Checking bio v3.0.0
[INFO] [stderr]     Checking umi-transfer v1.6.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 14.95s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: nix v0.30.1, proc-macro-error2 v2.0.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3", kill_on_drop: false }`
[INFO] [stdout] d08ff1f9489a5e465910ae428d20739aa1fe96c4f3d149429fa5331b422be5f3
