[INFO] fetching crate bamlift 0.3.0...
[INFO] checking bamlift-0.3.0 against try#f4690f24e7d9bcb0b168a02b06dd61391e8bd55a for pr-157814-crater-rollup
[INFO] extracting crate bamlift 0.3.0 into /workspace/builds/worker-2-tc2/source
[INFO] started tweaking crates.io crate bamlift 0.3.0
[INFO] finished tweaking crates.io crate bamlift 0.3.0
[INFO] tweaked toml for crates.io crate bamlift 0.3.0 written to /workspace/builds/worker-2-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate bamlift 0.3.0 on toolchain f4690f24e7d9bcb0b168a02b06dd61391e8bd55a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f4690f24e7d9bcb0b168a02b06dd61391e8bd55a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f4690f24e7d9bcb0b168a02b06dd61391e8bd55a" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 95 packages to latest compatible versions
[INFO] [stderr]       Adding env_logger v0.9.3 (available: v0.11.10)
[INFO] [stderr]       Adding itertools v0.10.5 (available: v0.14.0)
[INFO] [stderr]       Adding rust-htslib v0.44.1 (available: v1.0.0)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f4690f24e7d9bcb0b168a02b06dd61391e8bd55a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7cf07dcec6eec8f91d8fcff9552b5c74122c05467aaf1800be6da9d6f61e2ab2" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] cc6a8b31203956cb9d95e5c902b38c73dee17a70906dc5ecc172289f16143047
[INFO] running `Command { std: "docker" "start" "cc6a8b31203956cb9d95e5c902b38c73dee17a70906dc5ecc172289f16143047", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "cc6a8b31203956cb9d95e5c902b38c73dee17a70906dc5ecc172289f16143047" "/opt/rustwide/cargo-home/bin/cargo" "+f4690f24e7d9bcb0b168a02b06dd61391e8bd55a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "cc6a8b31203956cb9d95e5c902b38c73dee17a70906dc5ecc172289f16143047", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "cc6a8b31203956cb9d95e5c902b38c73dee17a70906dc5ecc172289f16143047" "/opt/rustwide/cargo-home/bin/cargo" "+f4690f24e7d9bcb0b168a02b06dd61391e8bd55a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling cmake v0.1.58
[INFO] [stderr]    Compiling openssl-src v300.6.1+3.6.3
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling curl-sys v0.4.89+curl-8.20.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling openssl-sys v0.9.117
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]    Compiling libz-sys v1.1.29
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]     Checking regex-automata v0.4.14
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking humantime v2.3.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]     Checking regex v1.12.4
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking env_logger v0.9.3
[ERROR] error running command: no output for 300 seconds
[INFO] running `Command { std: "docker" "inspect" "cc6a8b31203956cb9d95e5c902b38c73dee17a70906dc5ecc172289f16143047", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cc6a8b31203956cb9d95e5c902b38c73dee17a70906dc5ecc172289f16143047", kill_on_drop: false }`
[INFO] [stdout] cc6a8b31203956cb9d95e5c902b38c73dee17a70906dc5ecc172289f16143047
