[INFO] cloning repository https://github.com/arudhir/transdecoder-rust
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/arudhir/transdecoder-rust" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Farudhir%2Ftransdecoder-rust", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Farudhir%2Ftransdecoder-rust'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b28e658d5c04de63c753d7d8b2a94f413557ecd7
[INFO] checking arudhir/transdecoder-rust against master#ab26b175979ee7b2cb3302dce204b99df96f7efb for pr-157696
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Farudhir%2Ftransdecoder-rust" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/arudhir/transdecoder-rust
[INFO] finished tweaking git repo https://github.com/arudhir/transdecoder-rust
[INFO] tweaked toml for git repo https://github.com/arudhir/transdecoder-rust written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/arudhir/transdecoder-rust on toolchain ab26b175979ee7b2cb3302dce204b99df96f7efb
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab26b175979ee7b2cb3302dce204b99df96f7efb" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/arudhir/transdecoder-rust already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab26b175979ee7b2cb3302dce204b99df96f7efb" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3a6becf2bc8dde7f3fa57ede90e4f284e72d296796fc446bbb1e2c7cc0530151" "sleep" "infinity", kill_on_drop: false }`
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[INFO] [stderr]     Checking transdecoder-rust v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/orf.rs:45:9
[INFO] [stdout]    |
[INFO] [stdout] 45 |     let mut orfs = Vec::new();  // A dynamic vector of ORFs as an accumulator, like orfs = [] in
[INFO] [stdout]    |         ----^^^^
[INFO] [stdout]    |         |
[INFO] [stdout]    |         help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seq`
[INFO] [stdout]   --> src/orf.rs:44:18
[INFO] [stdout]    |
[INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec<ORF> {
[INFO] [stdout]    |                  ^^^ help: if this is intentional, prefix it with an underscore: `_seq`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `strand`
[INFO] [stdout]   --> src/orf.rs:44:29
[INFO] [stdout]    |
[INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec<ORF> {
[INFO] [stdout]    |                             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_strand`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `orf`
[INFO] [stdout]   --> src/orf.rs:92:17
[INFO] [stdout]    |
[INFO] [stdout] 92 | fn classify_orf(orf: &str) -> ORFType {
[INFO] [stdout]    |                 ^^^ help: if this is intentional, prefix it with an underscore: `_orf`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `Strand` is never used
[INFO] [stdout]  --> src/types.rs:2:10
[INFO] [stdout]   |
[INFO] [stdout] 2 | pub enum Strand {
[INFO] [stdout]   |          ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `ORFType` is never used
[INFO] [stdout]  --> src/types.rs:9:10
[INFO] [stdout]   |
[INFO] [stdout] 9 | pub enum ORFType {
[INFO] [stdout]   |          ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: struct `ORF` is never constructed
[INFO] [stdout]   --> src/types.rs:17:12
[INFO] [stdout]    |
[INFO] [stdout] 17 | pub struct ORF {
[INFO] [stdout]    |            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `make_codon_table` is never used
[INFO] [stdout]  --> src/orf.rs:4:8
[INFO] [stdout]   |
[INFO] [stdout] 4 | pub fn make_codon_table() -> HashMap<&'static str, char> {
[INFO] [stdout]   |        ^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `find_orfs` is never used
[INFO] [stdout]   --> src/orf.rs:44:8
[INFO] [stdout]    |
[INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec<ORF> {
[INFO] [stdout]    |        ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `is_start` is never used
[INFO] [stdout]   --> src/orf.rs:65:4
[INFO] [stdout]    |
[INFO] [stdout] 65 | fn is_start(seq: &str) -> bool {
[INFO] [stdout]    |    ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `is_stop` is never used
[INFO] [stdout]   --> src/orf.rs:70:4
[INFO] [stdout]    |
[INFO] [stdout] 70 | fn is_stop(seq: &str) -> bool {
[INFO] [stdout]    |    ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `translate` is never used
[INFO] [stdout]   --> src/orf.rs:75:4
[INFO] [stdout]    |
[INFO] [stdout] 75 | fn translate(seq: &str) -> String {
[INFO] [stdout]    |    ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `classify_orf` is never used
[INFO] [stdout]   --> src/orf.rs:92:4
[INFO] [stdout]    |
[INFO] [stdout] 92 | fn classify_orf(orf: &str) -> ORFType {
[INFO] [stdout]    |    ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `reverse_complement` is never used
[INFO] [stdout]   --> src/orf.rs:97:4
[INFO] [stdout]    |
[INFO] [stdout] 97 | fn reverse_complement(seq: &str) -> String {
[INFO] [stdout]    |    ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/orf.rs:45:9
[INFO] [stdout]    |
[INFO] [stdout] 45 |     let mut orfs = Vec::new();  // A dynamic vector of ORFs as an accumulator, like orfs = [] in
[INFO] [stdout]    |         ----^^^^
[INFO] [stdout]    |         |
[INFO] [stdout]    |         help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seq`
[INFO] [stdout]   --> src/orf.rs:44:18
[INFO] [stdout]    |
[INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec<ORF> {
[INFO] [stdout]    |                  ^^^ help: if this is intentional, prefix it with an underscore: `_seq`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `strand`
[INFO] [stdout]   --> src/orf.rs:44:29
[INFO] [stdout]    |
[INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec<ORF> {
[INFO] [stdout]    |                             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_strand`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `orf`
[INFO] [stdout]   --> src/orf.rs:92:17
[INFO] [stdout]    |
[INFO] [stdout] 92 | fn classify_orf(orf: &str) -> ORFType {
[INFO] [stdout]    |                 ^^^ help: if this is intentional, prefix it with an underscore: `_orf`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `find_orfs` is never used
[INFO] [stdout]   --> src/orf.rs:44:8
[INFO] [stdout]    |
[INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec<ORF> {
[INFO] [stdout]    |        ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `classify_orf` is never used
[INFO] [stdout]   --> src/orf.rs:92:4
[INFO] [stdout]    |
[INFO] [stdout] 92 | fn classify_orf(orf: &str) -> ORFType {
[INFO] [stdout]    |    ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 35.72s
[INFO] running `Command { std: "docker" "inspect" "4b13ecbe5ce40b9af614743aa6aa8b8163a8b1e2aa42b6a64d48a0a64db00276", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4b13ecbe5ce40b9af614743aa6aa8b8163a8b1e2aa42b6a64d48a0a64db00276", kill_on_drop: false }`
[INFO] [stdout] 4b13ecbe5ce40b9af614743aa6aa8b8163a8b1e2aa42b6a64d48a0a64db00276
