[INFO] cloning repository https://github.com/ssVyz/oligoscreen_tool
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ssVyz/oligoscreen_tool" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FssVyz%2Foligoscreen_tool", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FssVyz%2Foligoscreen_tool'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 3502f04c25fdcd058c3df4a95a7092c092e0362f
[INFO] checking ssVyz/oligoscreen_tool against try#163937523761cc0def32f1ba9ed63fdf65ad3478 for pr-156749
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FssVyz%2Foligoscreen_tool" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/ssVyz/oligoscreen_tool
[INFO] finished tweaking git repo https://github.com/ssVyz/oligoscreen_tool
[INFO] tweaked toml for git repo https://github.com/ssVyz/oligoscreen_tool written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/ssVyz/oligoscreen_tool on toolchain 163937523761cc0def32f1ba9ed63fdf65ad3478
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+163937523761cc0def32f1ba9ed63fdf65ad3478" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/ssVyz/oligoscreen_tool already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+163937523761cc0def32f1ba9ed63fdf65ad3478" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3e793bdf10248eb2ddbd6b0faebed8155c11b4589982e2893733958d93e8d540" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 1f4bde349299fee64e9d9fcf6141639cf0be4f1c6cf0e5f4957fcb40763e70cd
[INFO] running `Command { std: "docker" "start" "1f4bde349299fee64e9d9fcf6141639cf0be4f1c6cf0e5f4957fcb40763e70cd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "1f4bde349299fee64e9d9fcf6141639cf0be4f1c6cf0e5f4957fcb40763e70cd" "/opt/rustwide/cargo-home/bin/cargo" "+163937523761cc0def32f1ba9ed63fdf65ad3478" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1f4bde349299fee64e9d9fcf6141639cf0be4f1c6cf0e5f4957fcb40763e70cd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "1f4bde349299fee64e9d9fcf6141639cf0be4f1c6cf0e5f4957fcb40763e70cd" "/opt/rustwide/cargo-home/bin/cargo" "+163937523761cc0def32f1ba9ed63fdf65ad3478" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
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[INFO] [stdout] error[E0063]: missing fields `mode` and `thread_count` in initializer of `types::AnalysisParams`
[INFO] [stdout]    --> src/analysis/screener.rs:381:22
[INFO] [stdout]     |
[INFO] [stdout] 381 |         let params = AnalysisParams {
[INFO] [stdout]     |                      ^^^^^^^^^^^^^^ missing `mode` and `thread_count`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0063`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `oligoscreen_vr` (lib test) due to 1 previous error
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stdout] warning: unused import: `analyzer::*`
[INFO] [stdout]   --> src/analysis/mod.rs:15:9
[INFO] [stdout]    |
[INFO] [stdout] 15 | pub use analyzer::*;
[INFO] [stdout]    |         ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `analyzer::*`
[INFO] [stdout]   --> src/analysis/mod.rs:15:9
[INFO] [stdout]    |
[INFO] [stdout] 15 | pub use analyzer::*;
[INFO] [stdout]    |         ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: falling back to `f32` as the trait bound `f32: From<f64>` is not satisfied
[INFO] [stdout]    --> src/app.rs:909:51
[INFO] [stdout]     |
[INFO] [stdout] 909 | ...                   egui::Stroke::new(2.0, egui::Color32::WHITE),
[INFO] [stdout]     |                                         ^^^ help: explicitly specify the type as `f32`: `2.0_f32`
[INFO] [stdout]     |
[INFO] [stdout]     = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release!
[INFO] [stdout]     = note: for more information, see issue #154024 <https://github.com/rust-lang/rust/issues/154024>
[INFO] [stdout]     = note: `#[warn(float_literal_f32_fallback)]` (part of `#[warn(future_incompatible)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0063]: missing fields `mode` and `thread_count` in initializer of `types::AnalysisParams`
[INFO] [stdout]    --> src/analysis/screener.rs:381:22
[INFO] [stdout]     |
[INFO] [stdout] 381 |         let params = AnalysisParams {
[INFO] [stdout]     |                      ^^^^^^^^^^^^^^ missing `mode` and `thread_count`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: falling back to `f32` as the trait bound `f32: From<f64>` is not satisfied
[INFO] [stdout]    --> src/app.rs:909:51
[INFO] [stdout]     |
[INFO] [stdout] 909 | ...                   egui::Stroke::new(2.0, egui::Color32::WHITE),
[INFO] [stdout]     |                                         ^^^ help: explicitly specify the type as `f32`: `2.0_f32`
[INFO] [stdout]     |
[INFO] [stdout]     = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release!
[INFO] [stdout]     = note: for more information, see issue #154024 <https://github.com/rust-lang/rust/issues/154024>
[INFO] [stdout]     = note: `#[warn(float_literal_f32_fallback)]` (part of `#[warn(future_incompatible)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `description` is never used
[INFO] [stdout]   --> src/analysis/types.rs:40:12
[INFO] [stdout]    |
[INFO] [stdout] 39 | impl AnalysisMethod {
[INFO] [stdout]    | ------------------- method in this implementation
[INFO] [stdout] 40 |     pub fn description(&self) -> String {
[INFO] [stdout]    |            ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `current_length`, `current_position`, `total_positions`, `lengths_completed`, and `total_lengths` are never read
[INFO] [stdout]    --> src/analysis/types.rs:179:9
[INFO] [stdout]     |
[INFO] [stdout] 178 | pub struct ProgressUpdate {
[INFO] [stdout]     |            -------------- fields in this struct
[INFO] [stdout] 179 |     pub current_length: u32,
[INFO] [stdout]     |         ^^^^^^^^^^^^^^
[INFO] [stdout] 180 |     pub current_position: usize,
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^^
[INFO] [stdout] 181 |     pub total_positions: usize,
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^
[INFO] [stdout] 182 |     pub lengths_completed: u32,
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 183 |     pub total_lengths: u32,
[INFO] [stdout]     |         ^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `ProgressUpdate` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `STANDARD_BASES` is never used
[INFO] [stdout]  --> src/analysis/iupac.rs:7:11
[INFO] [stdout]   |
[INFO] [stdout] 7 | pub const STANDARD_BASES: [char; 4] = ['A', 'C', 'G', 'T'];
[INFO] [stdout]   |           ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `AMBIGUOUS_BASES` is never used
[INFO] [stdout]   --> src/analysis/iupac.rs:10:11
[INFO] [stdout]    |
[INFO] [stdout] 10 | pub const AMBIGUOUS_BASES: [char; 11] = ['R', 'Y', 'S', 'W', 'K', 'M', 'B', 'D', 'H', 'V', 'N'];
[INFO] [stdout]    |           ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `GAP_CHARS` is never used
[INFO] [stdout]   --> src/analysis/iupac.rs:13:11
[INFO] [stdout]    |
[INFO] [stdout] 13 | pub const GAP_CHARS: [char; 2] = ['-', '.'];
[INFO] [stdout]    |           ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `is_valid_dna` is never used
[INFO] [stdout]   --> src/analysis/iupac.rs:94:8
[INFO] [stdout]    |
[INFO] [stdout] 94 | pub fn is_valid_dna(c: char) -> bool {
[INFO] [stdout]    |        ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `iupac_to_bases` is never used
[INFO] [stdout]    --> src/analysis/iupac.rs:106:8
[INFO] [stdout]     |
[INFO] [stdout] 106 | pub fn iupac_to_bases(code: char) -> Option<&'static HashSet<char>> {
[INFO] [stdout]     |        ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `create_consensus` is never used
[INFO] [stdout]    --> src/analysis/iupac.rs:131:8
[INFO] [stdout]     |
[INFO] [stdout] 131 | pub fn create_consensus(sequences: &[&str], exclude_n: bool) -> (String, usize, bool) {
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `count_ambiguities` is never used
[INFO] [stdout]    --> src/analysis/iupac.rs:172:8
[INFO] [stdout]     |
[INFO] [stdout] 172 | pub fn count_ambiguities(seq: &str) -> usize {
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `is_empty` is never used
[INFO] [stdout]   --> src/analysis/fasta.rs:22:12
[INFO] [stdout]    |
[INFO] [stdout] 13 | impl AlignmentData {
[INFO] [stdout]    | ------------------ method in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 22 |     pub fn is_empty(&self) -> bool {
[INFO] [stdout]    |            ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0063`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `oligoscreen_vr` (bin "oligoscreen_vr" test) due to 1 previous error; 2 warnings emitted
[INFO] running `Command { std: "docker" "inspect" "1f4bde349299fee64e9d9fcf6141639cf0be4f1c6cf0e5f4957fcb40763e70cd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1f4bde349299fee64e9d9fcf6141639cf0be4f1c6cf0e5f4957fcb40763e70cd", kill_on_drop: false }`
[INFO] [stdout] 1f4bde349299fee64e9d9fcf6141639cf0be4f1c6cf0e5f4957fcb40763e70cd
