[INFO] fetching crate hgvs 0.22.0...
[INFO] checking hgvs-0.22.0 against master#2aabf3ce0569dd7c8c2d2a27944850056dcf2566 for pr-156508
[INFO] extracting crate hgvs 0.22.0 into /workspace/builds/worker-7-tc1/source
[INFO] started tweaking crates.io crate hgvs 0.22.0
[INFO] finished tweaking crates.io crate hgvs 0.22.0
[INFO] tweaked toml for crates.io crate hgvs 0.22.0 written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate hgvs 0.22.0 on toolchain 2aabf3ce0569dd7c8c2d2a27944850056dcf2566
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2aabf3ce0569dd7c8c2d2a27944850056dcf2566" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate hgvs 0.22.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2aabf3ce0569dd7c8c2d2a27944850056dcf2566" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded test-log v0.2.19
[INFO] [stderr]   Downloaded seqrepo v0.10.3
[INFO] [stderr]   Downloaded quick_cache v0.6.21
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[INFO] [stderr]   Downloaded noodles v0.76.0
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[INFO] [stderr]   Downloaded whoami v2.1.1
[INFO] [stderr]   Downloaded nom-language v0.1.0
[INFO] [stderr]   Downloaded objc2-system-configuration v0.3.2
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[INFO] [stderr]   Downloaded noodles-bgzf v0.30.0
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[INFO] [stderr]   Downloaded insta v1.47.2
[INFO] [stderr]   Downloaded cached_proc_macro_types v0.1.1
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded digest v0.11.2
[INFO] [stderr]   Downloaded getset v0.1.6
[INFO] [stderr]   Downloaded cached v0.59.0
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded simba v0.9.1
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded portable-atomic-util v0.2.6
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded postgres v0.19.13
[INFO] [stderr]   Downloaded rand_distr v0.4.3
[INFO] [stderr]   Downloaded cached_proc_macro v0.27.0
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded tokio-postgres v0.7.17
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded statrs v0.18.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded biocommons-bioutils v0.2.0
[INFO] [stderr]   Downloaded wide v0.7.33
[INFO] [stderr]   Downloaded bio v3.0.0
[INFO] [stderr]   Downloaded ndarray v0.16.1
[INFO] [stderr]   Downloaded nalgebra v0.33.3
[INFO] [stderr]   Downloaded tokio v1.51.1
[INFO] [stderr]   Downloaded libsqlite3-sys v0.28.0
[INFO] [stderr]   Downloaded noodles-fasta v0.39.0
[INFO] [stderr]   Downloaded md-5 v0.11.0
[INFO] [stderr]   Downloaded test-log-macros v0.2.19
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+2aabf3ce0569dd7c8c2d2a27944850056dcf2566" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f5663e5eff06e9103e081165339557a64aa648fdd973e1e1180c92761c0d089f
[INFO] running `Command { std: "docker" "start" "-a" "f5663e5eff06e9103e081165339557a64aa648fdd973e1e1180c92761c0d089f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f5663e5eff06e9103e081165339557a64aa648fdd973e1e1180c92761c0d089f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f5663e5eff06e9103e081165339557a64aa648fdd973e1e1180c92761c0d089f", kill_on_drop: false }`
[INFO] [stdout] f5663e5eff06e9103e081165339557a64aa648fdd973e1e1180c92761c0d089f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+2aabf3ce0569dd7c8c2d2a27944850056dcf2566" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b4e6926c8a1bc6ffb092766522bc43ec1f203ba5630ce7f2100769c61d8e61a9
[INFO] running `Command { std: "docker" "start" "-a" "b4e6926c8a1bc6ffb092766522bc43ec1f203ba5630ce7f2100769c61d8e61a9", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling libm v0.2.16
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling typenum v1.19.0
[INFO] [stderr]    Compiling getrandom v0.4.2
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking rand_core v0.10.0
[INFO] [stderr]     Checking cmov v0.5.3
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]     Checking const-oid v0.10.2
[INFO] [stderr]     Checking getrandom v0.2.17
[INFO] [stderr]     Checking cpufeatures v0.3.0
[INFO] [stderr]     Checking simd-adler32 v0.3.9
[INFO] [stderr]     Checking tinyvec v1.11.0
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]     Checking bytemuck v1.25.0
[INFO] [stderr]     Checking either v1.15.0
[INFO] [stderr]     Checking chacha20 v0.10.0
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]    Compiling pkg-config v0.3.32
[INFO] [stderr]    Compiling rustversion v1.0.22
[INFO] [stderr]     Checking ctutils v0.4.2
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking rand v0.10.0
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]    Compiling hashbrown v0.17.0
[INFO] [stderr]     Checking slab v0.4.12
[INFO] [stderr]     Checking unicode-normalization v0.1.25
[INFO] [stderr]    Compiling semver v1.0.28
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]     Checking tokio v1.51.1
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]     Checking noodles-core v0.15.0
[INFO] [stderr]    Compiling rustc_version v0.4.1
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]     Checking noodles-bgzf v0.30.0
[INFO] [stderr]    Compiling libsqlite3-sys v0.28.0
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]     Checking hashbrown v0.15.5
[INFO] [stderr]     Checking stringprep v0.1.5
[INFO] [stderr]    Compiling rstest_macros v0.26.1
[INFO] [stderr]    Compiling alloca v0.4.0
[INFO] [stderr]     Checking noodles-fasta v0.39.0
[INFO] [stderr]     Checking whoami v2.1.1
[INFO] [stderr]     Checking csv-core v0.1.13
[INFO] [stderr]     Checking linux-raw-sys v0.12.1
[INFO] [stderr]     Checking fallible-iterator v0.3.0
[INFO] [stderr]     Checking ciborium-io v0.2.2
[INFO] [stderr]     Checking plotters-backend v0.3.7
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking fallible-streaming-iterator v0.1.9
[INFO] [stderr]    Compiling indexmap v2.14.0
[INFO] [stderr]     Checking fixedbitset v0.5.7
[INFO] [stderr]     Checking hybrid-array v0.4.10
[INFO] [stderr]     Checking clap_builder v4.6.0
[INFO] [stderr]     Checking anstream v1.0.0
[INFO] [stderr]     Checking noodles v0.76.0
[INFO] [stderr]     Checking plotters-svg v0.3.7
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]    Compiling derefable v0.1.0
[INFO] [stderr]     Checking env_filter v1.0.1
[INFO] [stderr]     Checking itertools v0.13.0
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking nom v8.0.0
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]    Compiling hgvs v0.22.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking same-file v1.0.6
[INFO] [stderr]     Checking serde_json v1.0.149
[INFO] [stderr]    Compiling toml_edit v0.25.11+spec-1.1.0
[INFO] [stderr]     Checking csv v1.4.0
[INFO] [stderr]    Compiling relative-path v1.9.3
[INFO] [stderr]     Checking crypto-common v0.2.1
[INFO] [stderr]     Checking block-buffer v0.12.0
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]     Checking petgraph v0.8.3
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking ordered-float v5.3.0
[INFO] [stderr]    Compiling proc-macro-crate v3.5.0
[INFO] [stderr]     Checking simba v0.9.1
[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]     Checking cached_proc_macro_types v0.1.1
[INFO] [stderr]     Checking digest v0.11.2
[INFO] [stderr]     Checking fastrand v2.4.1
[INFO] [stderr]     Checking cast v0.3.0
[INFO] [stderr]    Compiling cfg-if v1.0.4
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking md-5 v0.11.0
[INFO] [stderr]     Checking sha2 v0.11.0
[INFO] [stderr]     Checking hmac v0.13.0
[INFO] [stderr]     Checking clap v4.6.0
[INFO] [stderr]     Checking plotters v0.3.7
[INFO] [stderr]     Checking criterion-plot v0.8.2
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]     Checking walkdir v2.5.0
[INFO] [stderr]     Checking env_logger v0.11.10
[INFO] [stderr]     Checking rayon v1.11.0
[INFO] [stderr]     Checking console v0.16.3
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[INFO] [stderr]     Checking yansi v1.0.1
[INFO] [stderr]     Checking oorandom v11.1.5
[INFO] [stderr]     Checking anes v0.1.6
[INFO] [stderr]     Checking futures-timer v3.0.3
[INFO] [stderr]     Checking similar v2.7.0
[INFO] [stderr]     Checking diff v0.1.13
[INFO] [stderr]     Checking base16ct v1.0.0
[INFO] [stderr]     Checking pretty_assertions v1.4.1
[INFO] [stderr]     Checking tokio-util v0.7.18
[INFO] [stderr]     Checking postgres-protocol v0.6.11
[INFO] [stderr]    Compiling darling_core v0.20.11
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling zerocopy-derive v0.8.48
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling futures-macro v0.3.32
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling tracing-attributes v0.1.31
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling async-trait v0.1.89
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling getset v0.1.6
[INFO] [stderr]    Compiling test-log-macros v0.2.19
[INFO] [stderr]     Checking nom-language v0.1.0
[INFO] [stderr]     Checking test-log v0.2.19
[INFO] [stderr]     Checking futures-util v0.3.32
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking tracing v0.1.44
[INFO] [stderr]     Checking thiserror v2.0.18
[INFO] [stderr]     Checking zerocopy v0.8.48
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]    Compiling darling_macro v0.20.11
[INFO] [stderr]    Compiling darling v0.20.11
[INFO] [stderr]    Compiling cached_proc_macro v0.27.0
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]     Checking rstest v0.26.1
[INFO] [stderr]     Checking chrono v0.4.44
[INFO] [stderr]     Checking multimap v0.10.1
[INFO] [stderr]     Checking bv v0.11.1
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking biocommons-bioutils v0.2.0
[INFO] [stderr]     Checking tinytemplate v1.2.1
[INFO] [stderr]     Checking insta v1.47.2
[INFO] [stderr]     Checking postgres-types v0.2.13
[INFO] [stderr]     Checking tokio-postgres v0.7.17
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]     Checking half v2.7.1
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking hashbrown v0.14.5
[INFO] [stderr]     Checking cached v0.59.0
[INFO] [stderr]     Checking quick_cache v0.6.21
[INFO] [stderr]     Checking ciborium-ll v0.2.2
[INFO] [stderr]     Checking ciborium v0.2.2
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking criterion v0.8.2
[INFO] [stderr]     Checking postgres v0.19.13
[INFO] [stderr]     Checking hashlink v0.9.1
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking rusqlite v0.31.0
[INFO] [stderr]     Checking nalgebra v0.33.3
[INFO] [stderr]     Checking seqrepo v0.10.3
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Checking bio v3.0.0
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 28s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "b4e6926c8a1bc6ffb092766522bc43ec1f203ba5630ce7f2100769c61d8e61a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b4e6926c8a1bc6ffb092766522bc43ec1f203ba5630ce7f2100769c61d8e61a9", kill_on_drop: false }`
[INFO] [stdout] b4e6926c8a1bc6ffb092766522bc43ec1f203ba5630ce7f2100769c61d8e61a9