[INFO] cloning repository https://github.com/frubino/bio-rascal
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/frubino/bio-rascal" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffrubino%2Fbio-rascal", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffrubino%2Fbio-rascal'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8dd5505939c321fef207d4e9bda12e18af54f52a
[INFO] checking frubino/bio-rascal against 1.95.0 for pr-155915
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffrubino%2Fbio-rascal" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/frubino/bio-rascal
[INFO] finished tweaking git repo https://github.com/frubino/bio-rascal
[INFO] tweaked toml for git repo https://github.com/frubino/bio-rascal written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/frubino/bio-rascal on toolchain 1.95.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.95.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/frubino/bio-rascal already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.95.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded plotters-svg v0.3.3
[INFO] [stderr]   Downloaded plotters-backend v0.3.4
[INFO] [stderr]   Downloaded plotters v0.3.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1.95.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 89cf761fe86495cabf9a8ad952734bdf2a8c41cbf77b38b828b4602cb1faf773
[INFO] running `Command { std: "docker" "start" "-a" "89cf761fe86495cabf9a8ad952734bdf2a8c41cbf77b38b828b4602cb1faf773", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "89cf761fe86495cabf9a8ad952734bdf2a8c41cbf77b38b828b4602cb1faf773", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "89cf761fe86495cabf9a8ad952734bdf2a8c41cbf77b38b828b4602cb1faf773", kill_on_drop: false }`
[INFO] [stdout] 89cf761fe86495cabf9a8ad952734bdf2a8c41cbf77b38b828b4602cb1faf773
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1.95.0" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 13d21b84f28492be357343f2a3546ebb6f367812e4f6c6872d0da4d2b377a426
[INFO] running `Command { std: "docker" "start" "-a" "13d21b84f28492be357343f2a3546ebb6f367812e4f6c6872d0da4d2b377a426", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.49
[INFO] [stderr]    Compiling quote v1.0.23
[INFO] [stderr]    Compiling syn v1.0.107
[INFO] [stderr]    Compiling serde_derive v1.0.152
[INFO] [stderr]    Compiling serde v1.0.152
[INFO] [stderr]    Compiling crossbeam-utils v0.8.14
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling serde_json v1.0.91
[INFO] [stderr]    Compiling siphasher v0.3.10
[INFO] [stderr]    Compiling libc v0.2.139
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.13
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]     Checking either v1.8.0
[INFO] [stderr]    Compiling rayon-core v1.10.1
[INFO] [stderr]    Compiling anyhow v1.0.68
[INFO] [stderr]     Checking plotters-backend v0.3.4
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]     Checking regex-syntax v0.6.28
[INFO] [stderr]     Checking urlencoding v2.1.2
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]     Checking clap v2.34.0
[INFO] [stderr]     Checking phf_shared v0.11.1
[INFO] [stderr]     Checking plotters-svg v0.3.3
[INFO] [stderr]     Checking crossbeam-channel v0.5.6
[INFO] [stderr]    Compiling phf_generator v0.11.1
[INFO] [stderr]     Checking getrandom v0.2.8
[INFO] [stderr]     Checking num_cpus v1.15.0
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking crossbeam-deque v0.8.2
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking plotters v0.3.4
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking regex v1.7.1
[INFO] [stderr]     Checking rayon v1.6.1
[INFO] [stderr]     Checking criterion-plot v0.4.5
[INFO] [stderr]    Compiling phf_macros v0.11.1
[INFO] [stderr]    Compiling uuid-macro-internal v1.2.2
[INFO] [stderr]     Checking phf v0.11.1
[INFO] [stderr]     Checking bstr v0.2.17
[INFO] [stderr]     Checking time v0.3.17
[INFO] [stderr]     Checking uuid v1.2.2
[INFO] [stderr]     Checking serde_cbor v0.11.2
[INFO] [stderr]     Checking csv v1.1.6
[INFO] [stderr]     Checking tinytemplate v1.2.1
[INFO] [stderr]     Checking bio_rascal v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `log::info`
[INFO] [stdout]  --> src/samtools.rs:5:5
[INFO] [stdout]   |
[INFO] [stdout] 5 | use log::info;
[INFO] [stdout]   |     ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Checking criterion v0.3.6
[INFO] [stdout] warning: unused variable: `taxon`
[INFO] [stdout]    --> src/taxon.rs:182:36
[INFO] [stdout]     |
[INFO] [stdout] 182 |     pub fn get_ranked_taxon(&self, taxon: u32, rank: &Rank) -> &Taxon {
[INFO] [stdout]     |                                    ^^^^^ help: if this is intentional, prefix it with an underscore: `_taxon`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `rank`
[INFO] [stdout]    --> src/taxon.rs:182:48
[INFO] [stdout]     |
[INFO] [stdout] 182 |     pub fn get_ranked_taxon(&self, taxon: u32, rank: &Rank) -> &Taxon {
[INFO] [stdout]     |                                                ^^^^ help: if this is intentional, prefix it with an underscore: `_rank`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/taxon.rs:225:17
[INFO] [stdout]     |
[INFO] [stdout] 225 |             let mut node = match self.nodes.get_mut(&taxon_id) {
[INFO] [stdout]     |                 ----^^^^
[INFO] [stdout]     |                 |
[INFO] [stdout]     |                 help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `log::info`
[INFO] [stdout]  --> src/samtools.rs:5:5
[INFO] [stdout]   |
[INFO] [stdout] 5 | use log::info;
[INFO] [stdout]   |     ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `taxon`
[INFO] [stdout]    --> src/taxon.rs:182:36
[INFO] [stdout]     |
[INFO] [stdout] 182 |     pub fn get_ranked_taxon(&self, taxon: u32, rank: &Rank) -> &Taxon {
[INFO] [stdout]     |                                    ^^^^^ help: if this is intentional, prefix it with an underscore: `_taxon`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `rank`
[INFO] [stdout]    --> src/taxon.rs:182:48
[INFO] [stdout]     |
[INFO] [stdout] 182 |     pub fn get_ranked_taxon(&self, taxon: u32, rank: &Rank) -> &Taxon {
[INFO] [stdout]     |                                                ^^^^ help: if this is intentional, prefix it with an underscore: `_rank`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/taxon.rs:225:17
[INFO] [stdout]     |
[INFO] [stdout] 225 |             let mut node = match self.nodes.get_mut(&taxon_id) {
[INFO] [stdout]     |                 ----^^^^
[INFO] [stdout]     |                 |
[INFO] [stdout]     |                 help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/taxon.rs:674:13
[INFO] [stdout]     |
[INFO] [stdout] 674 |         let mut t = taxonomy.get_taxon_mut(&2173).unwrap();
[INFO] [stdout]     |             ----^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 22.96s
[INFO] running `Command { std: "docker" "inspect" "13d21b84f28492be357343f2a3546ebb6f367812e4f6c6872d0da4d2b377a426", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "13d21b84f28492be357343f2a3546ebb6f367812e4f6c6872d0da4d2b377a426", kill_on_drop: false }`
[INFO] [stdout] 13d21b84f28492be357343f2a3546ebb6f367812e4f6c6872d0da4d2b377a426
