[INFO] cloning repository https://github.com/COMBINE-lab/piscem-infer
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/COMBINE-lab/piscem-infer" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCOMBINE-lab%2Fpiscem-infer", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCOMBINE-lab%2Fpiscem-infer'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b9cde50f62d445bff6442fca65d2a64e35541348
[INFO] checking COMBINE-lab/piscem-infer against 1.95.0 for pr-155915
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCOMBINE-lab%2Fpiscem-infer" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/COMBINE-lab/piscem-infer
[INFO] finished tweaking git repo https://github.com/COMBINE-lab/piscem-infer
[INFO] tweaked toml for git repo https://github.com/COMBINE-lab/piscem-infer written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/COMBINE-lab/piscem-infer on toolchain 1.95.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.95.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/COMBINE-lab/piscem-infer already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.95.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded path-tools v0.1.0
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] [stderr]   Downloaded noodles v0.85.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.33.0
[INFO] [stderr]   Downloaded array-init-cursor v0.2.1
[INFO] [stderr]   Downloaded foreign_vec v0.1.0
[INFO] [stderr]   Downloaded atomic_float v1.1.0
[INFO] [stderr]   Downloaded distrs v0.2.2
[INFO] [stderr]   Downloaded streaming-decompression v0.1.2
[INFO] [stderr]   Downloaded clap-num v1.2.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded snap v1.1.1
[INFO] [stderr]   Downloaded terminal_size v0.4.2
[INFO] [stderr]   Downloaded hash_hasher v2.0.4
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded noodles-csi v0.40.0
[INFO] [stderr]   Downloaded planus v0.3.1
[INFO] [stderr]   Downloaded libradicl v0.10.0
[INFO] [stderr]   Downloaded arrow-format v0.8.1
[INFO] [stderr]   Downloaded lexical-parse-integer v1.0.5
[INFO] [stderr]   Downloaded lexical-core v1.0.5
[INFO] [stderr]   Downloaded lexical-write-integer v1.0.5
[INFO] [stderr]   Downloaded parquet-format-safe v0.2.4
[INFO] [stderr]   Downloaded noodles-sam v0.66.0
[INFO] [stderr]   Downloaded clap v4.5.41
[INFO] [stderr]   Downloaded lexical-util v1.0.6
[INFO] [stderr]   Downloaded lexical-write-float v1.0.5
[INFO] [stderr]   Downloaded noodles-bam v0.70.0
[INFO] [stderr]   Downloaded clap_builder v4.5.41
[INFO] [stderr]   Downloaded lexical-parse-float v1.0.5
[INFO] [stderr]   Downloaded syn v2.0.116
[INFO] [stderr]   Downloaded parquet2 v0.17.2
[INFO] [stderr]   Downloaded arrow2 v0.18.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1.95.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 856ee47933b3fd00b92695f5249241c47cc0e3b52fe4aee36eb0f946a79ea185
[INFO] running `Command { std: "docker" "start" "-a" "856ee47933b3fd00b92695f5249241c47cc0e3b52fe4aee36eb0f946a79ea185", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "856ee47933b3fd00b92695f5249241c47cc0e3b52fe4aee36eb0f946a79ea185", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "856ee47933b3fd00b92695f5249241c47cc0e3b52fe4aee36eb0f946a79ea185", kill_on_drop: false }`
[INFO] [stdout] 856ee47933b3fd00b92695f5249241c47cc0e3b52fe4aee36eb0f946a79ea185
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1.95.0" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c234fbc5a3cae17c722ba9e7e822739130eac4590b17f009ebb9667d2cba5595
[INFO] running `Command { std: "docker" "start" "-a" "c234fbc5a3cae17c722ba9e7e822739130eac4590b17f009ebb9667d2cba5595", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v2.0.116
[INFO] [stderr]    Compiling libc v0.2.174
[INFO] [stderr]    Compiling libm v0.2.15
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]     Checking lexical-util v1.0.6
[INFO] [stderr]    Compiling zerocopy v0.8.26
[INFO] [stderr]     Checking futures-sink v0.3.31
[INFO] [stderr]     Checking regex-automata v0.4.9
[INFO] [stderr]     Checking crc32fast v1.5.0
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling zstd-safe v6.0.6
[INFO] [stderr]    Compiling rustix v1.0.7
[INFO] [stderr]     Checking indexmap v2.10.0
[INFO] [stderr]    Compiling snap v1.1.1
[INFO] [stderr]     Checking unicode-width v0.2.1
[INFO] [stderr]    Compiling rustversion v1.0.21
[INFO] [stderr]     Checking futures-channel v0.3.31
[INFO] [stderr]     Checking linux-raw-sys v0.9.4
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]     Checking array-init-cursor v0.2.1
[INFO] [stderr]     Checking anstyle-query v1.1.3
[INFO] [stderr]     Checking lexical-parse-integer v1.0.5
[INFO] [stderr]     Checking lexical-write-integer v1.0.5
[INFO] [stderr]     Checking flate2 v1.1.2
[INFO] [stderr]     Checking planus v0.3.1
[INFO] [stderr]     Checking anstream v0.6.19
[INFO] [stderr]     Checking streaming-decompression v0.1.2
[INFO] [stderr]     Checking lexical-parse-float v1.0.5
[INFO] [stderr]     Checking chacha20 v0.10.0
[INFO] [stderr]     Checking lexical-write-float v1.0.5
[INFO] [stderr]    Compiling arrow2 v0.18.0
[INFO] [stderr]     Checking noodles-bgzf v0.33.0
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking tracing-log v0.2.0
[INFO] [stderr]     Checking testing_table v0.3.0
[INFO] [stderr]     Checking thread_local v1.1.9
[INFO] [stderr]     Checking scroll v0.12.0
[INFO] [stderr]     Checking foreign_vec v0.1.0
[INFO] [stderr]     Checking papergrid v0.17.0
[INFO] [stderr]     Checking hash_hasher v2.0.4
[INFO] [stderr]     Checking ethnum v1.5.2
[INFO] [stderr]     Checking dyn-clone v1.0.19
[INFO] [stderr]     Checking terminal_size v0.4.2
[INFO] [stderr]     Checking lexical-core v1.0.5
[INFO] [stderr]     Checking num-traits v0.2.19
[INFO] [stderr]     Checking streaming-iterator v0.1.9
[INFO] [stderr]     Checking num-format v0.4.4
[INFO] [stderr]     Checking atomic_float v1.1.0
[INFO] [stderr]     Checking distrs v0.2.2
[INFO] [stderr]     Checking clap_builder v4.5.41
[INFO] [stderr]     Checking scroll v0.13.0
[INFO] [stderr]     Checking path-tools v0.1.0
[INFO] [stderr]     Checking getrandom v0.3.3
[INFO] [stderr]     Checking parking_lot_core v0.9.11
[INFO] [stderr]     Checking getrandom v0.4.1
[INFO] [stderr]    Compiling jobserver v0.1.33
[INFO] [stderr]     Checking console v0.15.11
[INFO] [stderr]     Checking rand v0.10.0
[INFO] [stderr]     Checking indicatif v0.17.11
[INFO] [stderr]    Compiling cc v1.2.29
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking chrono v0.4.41
[INFO] [stderr]     Checking clap-num v1.2.0
[INFO] [stderr]     Checking rand_distr v0.6.0
[INFO] [stderr]     Checking num-bigint v0.4.6
[INFO] [stderr]     Checking num-iter v0.1.45
[INFO] [stderr]     Checking hashbrown v0.14.5
[INFO] [stderr]     Checking bstr v1.12.0
[INFO] [stderr]     Checking regex v1.11.1
[INFO] [stderr]    Compiling zstd-sys v2.0.15+zstd.1.5.7
[INFO] [stderr]     Checking dashmap v6.1.0
[INFO] [stderr]    Compiling derivative v2.2.0
[INFO] [stderr]     Checking noodles-core v0.15.0
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking noodles-csi v0.40.0
[INFO] [stderr]     Checking num v0.4.3
[INFO] [stderr]     Checking noodles-sam v0.66.0
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]     Checking noodles-bam v0.70.0
[INFO] [stderr]    Compiling futures-macro v0.3.31
[INFO] [stderr]    Compiling serde_derive v1.0.219
[INFO] [stderr]    Compiling async-stream-impl v0.3.6
[INFO] [stderr]    Compiling async-trait v0.1.88
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling bytemuck_derive v1.9.3
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling tracing-attributes v0.1.30
[INFO] [stderr]    Compiling clap_derive v4.5.41
[INFO] [stderr]    Compiling tabled_derive v0.11.0
[INFO] [stderr]     Checking noodles v0.85.0
[INFO] [stderr]     Checking async-stream v0.3.6
[INFO] [stderr]     Checking tabled v0.20.0
[INFO] [stderr]     Checking futures-util v0.3.31
[INFO] [stderr]     Checking bytemuck v1.23.1
[INFO] [stderr]     Checking tracing v0.1.41
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking tracing-subscriber v0.3.19
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking clap v4.5.41
[INFO] [stderr]     Checking zstd v0.12.4
[INFO] [stderr]     Checking serde v1.0.219
[INFO] [stderr]     Checking futures-executor v0.3.31
[INFO] [stderr]     Checking futures v0.3.31
[INFO] [stderr]     Checking parquet-format-safe v0.2.4
[INFO] [stderr]     Checking arrow-format v0.8.1
[INFO] [stderr]     Checking libradicl v0.10.0
[INFO] [stderr]     Checking serde_json v1.0.140
[INFO] [stderr]     Checking parquet2 v0.17.2
[INFO] [stderr]     Checking piscem-infer v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 48.35s
[INFO] running `Command { std: "docker" "inspect" "c234fbc5a3cae17c722ba9e7e822739130eac4590b17f009ebb9667d2cba5595", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c234fbc5a3cae17c722ba9e7e822739130eac4590b17f009ebb9667d2cba5595", kill_on_drop: false }`
[INFO] [stdout] c234fbc5a3cae17c722ba9e7e822739130eac4590b17f009ebb9667d2cba5595
