[INFO] cloning repository https://github.com/sriram98v/ml-seqclass
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sriram98v/ml-seqclass" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 82ef715695eb68d9236cf4078a56648a1bab7c30
[INFO] checking sriram98v/ml-seqclass against try#012cd62c9add58ab3910e44c137d87db3ab70f61 for pr-155915
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/sriram98v/ml-seqclass
[INFO] finished tweaking git repo https://github.com/sriram98v/ml-seqclass
[INFO] tweaked toml for git repo https://github.com/sriram98v/ml-seqclass written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/sriram98v/ml-seqclass on toolchain 012cd62c9add58ab3910e44c137d87db3ab70f61
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+012cd62c9add58ab3910e44c137d87db3ab70f61" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/sriram98v/ml-seqclass already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+012cd62c9add58ab3910e44c137d87db3ab70f61" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking sriram98v/ml-seqclass against try#012cd62c9add58ab3910e44c137d87db3ab70f61 for pr-155915
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/sriram98v/ml-seqclass
[INFO] finished tweaking git repo https://github.com/sriram98v/ml-seqclass
[INFO] tweaked toml for git repo https://github.com/sriram98v/ml-seqclass written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/sriram98v/ml-seqclass on toolchain 012cd62c9add58ab3910e44c137d87db3ab70f61
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+012cd62c9add58ab3910e44c137d87db3ab70f61" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/sriram98v/ml-seqclass already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+012cd62c9add58ab3910e44c137d87db3ab70f61" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded testing_table v0.3.0
[INFO] [stderr]   Downloaded tabled_derive v0.11.0
[INFO] [stderr]   Downloaded shrust v0.0.7
[INFO] [stderr]   Downloaded rust-argon2 v0.8.3
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[INFO] [stderr]   Downloaded py_literal v0.4.0
[INFO] [stderr]   Downloaded getset v0.1.6
[INFO] [stderr]   Downloaded redox_users v0.3.5
[INFO] [stderr]   Downloaded nalgebra-macros v0.1.0
[INFO] [stderr]   Downloaded multimap v0.9.1
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded derive-new v0.5.9
[INFO] [stderr]   Downloaded dirs v1.0.5
[INFO] [stderr]   Downloaded lockfree-object-pool v0.1.6
[INFO] [stderr]   Downloaded format_num v0.1.0
[INFO] [stderr]   Downloaded thiserror-impl v1.0.60
[INFO] [stderr]   Downloaded rustversion v1.0.16
[INFO] [stderr]   Downloaded bytecount v0.6.8
[INFO] [stderr]   Downloaded noisy_float v0.2.0
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded either v1.11.0
[INFO] [stderr]   Downloaded pest_meta v2.7.15
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded pest_generator v2.7.15
[INFO] [stderr]   Downloaded liblzma v0.3.6
[INFO] [stderr]   Downloaded term v0.5.2
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded bytemuck v1.15.0
[INFO] [stderr]   Downloaded pest_derive v2.7.15
[INFO] [stderr]   Downloaded ndarray-stats v0.6.0
[INFO] [stderr]   Downloaded simba v0.6.0
[INFO] [stderr]   Downloaded papergrid v0.17.0
[INFO] [stderr]   Downloaded zip v2.4.1
[INFO] [stderr]   Downloaded libsufr v0.7.12
[INFO] [stderr]   Downloaded smawk v0.3.2
[INFO] [stderr]   Downloaded prettytable-rs v0.8.0
[INFO] [stderr]   Downloaded zopfli v0.8.1
[INFO] [stderr]   Downloaded thiserror v1.0.60
[INFO] [stderr]   Downloaded ndarray-npy v0.9.1
[INFO] [stderr]   Downloaded bio-types v1.0.1
[INFO] [stderr]   Downloaded once_cell v1.21.1
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded wide v0.7.17
[INFO] [stderr]   Downloaded textwrap v0.16.2
[INFO] [stderr]   Downloaded statrs v0.16.0
[INFO] [stderr]   Downloaded tabled v0.20.0
[INFO] [stderr]   Downloaded bio v3.0.0
[INFO] [stderr]   Downloaded ndarray v0.16.1
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] [stderr]   Downloaded needletail v0.6.3
[INFO] [stderr]   Downloaded liblzma-sys v0.3.13
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+012cd62c9add58ab3910e44c137d87db3ab70f61" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 52b22a4d58bf221de3a91c3aac6d943ed7e848a599ce97052dda209e20b21a13
[INFO] running `Command { std: "docker" "start" "-a" "52b22a4d58bf221de3a91c3aac6d943ed7e848a599ce97052dda209e20b21a13", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "52b22a4d58bf221de3a91c3aac6d943ed7e848a599ce97052dda209e20b21a13", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "52b22a4d58bf221de3a91c3aac6d943ed7e848a599ce97052dda209e20b21a13", kill_on_drop: false }`
[INFO] [stdout] 52b22a4d58bf221de3a91c3aac6d943ed7e848a599ce97052dda209e20b21a13
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+012cd62c9add58ab3910e44c137d87db3ab70f61" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8be1d42dda51087b3b4ecea506587433851d00398ab754421559c5144428df25
[INFO] running `Command { std: "docker" "start" "-a" "8be1d42dda51087b3b4ecea506587433851d00398ab754421559c5144428df25", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.94
[INFO] [stderr]    Compiling libc v0.2.174
[INFO] [stderr]    Compiling once_cell v1.21.1
[INFO] [stderr]     Checking memchr v2.7.2
[INFO] [stderr]    Compiling thiserror v2.0.12
[INFO] [stderr]    Compiling serde v1.0.219
[INFO] [stderr]    Compiling getrandom v0.3.3
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]     Checking either v1.11.0
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking bytemuck v1.15.0
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking hashbrown v0.15.5
[INFO] [stderr]     Checking log v0.4.26
[INFO] [stderr]    Compiling ucd-trie v0.1.7
[INFO] [stderr]     Checking utf8parse v0.2.1
[INFO] [stderr]     Checking miniz_oxide v0.8.5
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]     Checking anstyle-query v1.0.3
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking anstyle-parse v0.2.4
[INFO] [stderr]     Checking safe_arch v0.7.1
[INFO] [stderr]    Compiling rustversion v1.0.16
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.0
[INFO] [stderr]     Checking bytecount v0.6.8
[INFO] [stderr]     Checking colorchoice v1.0.1
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]     Checking crossbeam-deque v0.8.5
[INFO] [stderr]     Checking anstream v0.6.14
[INFO] [stderr]     Checking flate2 v1.1.2
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking unicode-width v0.1.12
[INFO] [stderr]    Compiling quote v1.0.40
[INFO] [stderr]     Checking indexmap v2.10.0
[INFO] [stderr]    Compiling thiserror v1.0.60
[INFO] [stderr]     Checking unicode-width v0.2.1
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling anyhow v1.0.98
[INFO] [stderr]    Compiling rustix v1.0.8
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]     Checking wide v0.7.17
[INFO] [stderr]     Checking rayon-core v1.12.1
[INFO] [stderr]    Compiling syn v2.0.100
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]    Compiling jobserver v0.1.33
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]    Compiling portable-atomic v1.11.1
[INFO] [stderr]     Checking simd-adler32 v0.3.7
[INFO] [stderr]     Checking lockfree-object-pool v0.1.6
[INFO] [stderr]    Compiling zip v2.4.1
[INFO] [stderr]     Checking linux-raw-sys v0.9.4
[INFO] [stderr]     Checking getrandom v0.2.15
[INFO] [stderr]     Checking dirs v1.0.5
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking rand_core v0.9.3
[INFO] [stderr]     Checking bumpalo v3.17.0
[INFO] [stderr]     Checking bitflags v2.9.1
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling cc v1.0.97
[INFO] [stderr]     Checking rand_chacha v0.9.0
[INFO] [stderr]     Checking term v0.5.2
[INFO] [stderr]     Checking rayon v1.10.0
[INFO] [stderr]     Checking zopfli v0.8.1
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking buffer-redux v1.0.2
[INFO] [stderr]     Checking num-bigint v0.4.6
[INFO] [stderr]     Checking itertools v0.13.0
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking iana-time-zone v0.1.63
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking encode_unicode v0.3.6
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking jiff v0.2.15
[INFO] [stderr]     Checking clap_builder v4.5.2
[INFO] [stderr]     Checking regex-automata v0.4.9
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[INFO] [stderr]     Checking rand_distr v0.4.3
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[INFO] [stderr]     Checking rand v0.9.2
[INFO] [stderr]     Checking regex v1.11.1
[INFO] [stderr]     Checking console v0.15.8
[INFO] [stderr]     Checking num_cpus v1.17.0
[INFO] [stderr]     Checking env_filter v0.1.3
[INFO] [stderr]     Checking format_num v0.1.0
[INFO] [stderr]    Compiling zstd-sys v2.0.15+zstd.1.5.7
[INFO] [stderr]    Compiling liblzma-sys v0.3.13
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]     Checking tempfile v3.20.0
[INFO] [stderr]     Checking testing_table v0.3.0
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking ordered-float v5.1.0
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[INFO] [stderr]     Checking thread_local v1.1.9
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[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking unicode-linebreak v0.1.5
[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]     Checking home v0.5.11
[INFO] [stderr]    Compiling derefable v0.1.0
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking number_prefix v0.4.0
[INFO] [stderr]     Checking textwrap v0.16.2
[INFO] [stderr]     Checking itertools v0.12.1
[INFO] [stderr]     Checking indicatif v0.17.8
[INFO] [stderr]     Checking bzip2 v0.4.4
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]     Checking ndarray-stats v0.6.0
[INFO] [stderr]     Checking env_logger v0.11.8
[INFO] [stderr]    Compiling thiserror-impl v2.0.12
[INFO] [stderr]    Compiling serde_derive v1.0.219
[INFO] [stderr]    Compiling thiserror-impl v1.0.60
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling getset v0.1.6
[INFO] [stderr]    Compiling tabled_derive v0.11.0
[INFO] [stderr]    Compiling clap_derive v4.5.4
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking liblzma v0.3.6
[INFO] [stderr]     Checking tabled v0.20.0
[INFO] [stderr]    Compiling pest v2.7.15
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]     Checking bio-types v1.0.1
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]     Checking needletail v0.6.3
[INFO] [stderr]     Checking clap v4.5.4
[INFO] [stderr]    Compiling pest_meta v2.7.15
[INFO] [stderr]    Compiling pest_generator v2.7.15
[INFO] [stderr]    Compiling pest_derive v2.7.15
[INFO] [stderr]     Checking py_literal v0.4.0
[INFO] [stderr]     Checking ndarray-npy v0.9.1
[INFO] [stderr]     Checking csv v1.3.0
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking multimap v0.9.1
[INFO] [stderr]     Checking prettytable-rs v0.8.0
[INFO] [stderr]     Checking libsufr v0.7.12
[INFO] [stderr]     Checking shrust v0.0.7
[INFO] [stderr]     Checking statrs v0.16.0
[INFO] [stderr]     Checking bio v3.0.0
[INFO] [stderr]     Checking seq_class v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 01s
[INFO] running `Command { std: "docker" "inspect" "8be1d42dda51087b3b4ecea506587433851d00398ab754421559c5144428df25", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8be1d42dda51087b3b4ecea506587433851d00398ab754421559c5144428df25", kill_on_drop: false }`
[INFO] [stdout] 8be1d42dda51087b3b4ecea506587433851d00398ab754421559c5144428df25
