[INFO] cloning repository https://github.com/nsbuitrago/parasail-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/nsbuitrago/parasail-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnsbuitrago%2Fparasail-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnsbuitrago%2Fparasail-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d823a42be303f28a25c06f0cc6f09340b120dc96
[INFO] testing nsbuitrago/parasail-rs against try#33835004928d3bf65db4d4712e1330766263b0bd for pr-155739
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnsbuitrago%2Fparasail-rs" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-1-tc2/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/nsbuitrago/parasail-rs
[INFO] finished tweaking git repo https://github.com/nsbuitrago/parasail-rs
[INFO] tweaked toml for git repo https://github.com/nsbuitrago/parasail-rs written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/nsbuitrago/parasail-rs on toolchain 33835004928d3bf65db4d4712e1330766263b0bd
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+33835004928d3bf65db4d4712e1330766263b0bd" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/nsbuitrago/parasail-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+33835004928d3bf65db4d4712e1330766263b0bd" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+33835004928d3bf65db4d4712e1330766263b0bd" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6ce43ab5fa3531fdbeba3053ca6eba6ddfcca7e02de90ce961748680a52c03b1
[INFO] running `Command { std: "docker" "start" "-a" "6ce43ab5fa3531fdbeba3053ca6eba6ddfcca7e02de90ce961748680a52c03b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6ce43ab5fa3531fdbeba3053ca6eba6ddfcca7e02de90ce961748680a52c03b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6ce43ab5fa3531fdbeba3053ca6eba6ddfcca7e02de90ce961748680a52c03b1", kill_on_drop: false }`
[INFO] [stdout] 6ce43ab5fa3531fdbeba3053ca6eba6ddfcca7e02de90ce961748680a52c03b1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+33835004928d3bf65db4d4712e1330766263b0bd" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 73f13f36557e487605b2dd57d272993cd3f55d21230d78eda0955dcbd7bcaf7f
[INFO] running `Command { std: "docker" "start" "-a" "73f13f36557e487605b2dd57d272993cd3f55d21230d78eda0955dcbd7bcaf7f", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.186
[INFO] [stderr]    Compiling prettyplease v0.2.25
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling find-msvc-tools v0.1.6
[INFO] [stderr]    Compiling bindgen v0.72.1
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling rustc-hash v2.1.1
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling syn v2.0.87
[INFO] [stderr]    Compiling cc v1.2.51
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling cmake v0.1.57
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling derive_more-impl v2.1.1
[INFO] [stderr]    Compiling derive_more v2.1.1
[INFO] [stderr]    Compiling libparasail-sys v0.2.1
[INFO] [stderr]    Compiling parasail-rs v0.9.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 09s
[INFO] running `Command { std: "docker" "inspect" "73f13f36557e487605b2dd57d272993cd3f55d21230d78eda0955dcbd7bcaf7f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "73f13f36557e487605b2dd57d272993cd3f55d21230d78eda0955dcbd7bcaf7f", kill_on_drop: false }`
[INFO] [stdout] 73f13f36557e487605b2dd57d272993cd3f55d21230d78eda0955dcbd7bcaf7f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+33835004928d3bf65db4d4712e1330766263b0bd" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 80a3d2c1ade99158751ac1b3799e5fc697877b7f95a77cd64d08027863c939b9
[INFO] running `Command { std: "docker" "start" "-a" "80a3d2c1ade99158751ac1b3799e5fc697877b7f95a77cd64d08027863c939b9", kill_on_drop: false }`
[INFO] [stderr]    Compiling parasail-rs v0.9.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.74s
[INFO] running `Command { std: "docker" "inspect" "80a3d2c1ade99158751ac1b3799e5fc697877b7f95a77cd64d08027863c939b9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "80a3d2c1ade99158751ac1b3799e5fc697877b7f95a77cd64d08027863c939b9", kill_on_drop: false }`
[INFO] [stdout] 80a3d2c1ade99158751ac1b3799e5fc697877b7f95a77cd64d08027863c939b9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+33835004928d3bf65db4d4712e1330766263b0bd" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 408a3bf772da83667e86c87093f5758a9baf4cd204201eaa8e59d38322144bf3
[INFO] running `Command { std: "docker" "start" "-a" "408a3bf772da83667e86c87093f5758a9baf4cd204201eaa8e59d38322144bf3", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.04s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/parasail_rs-3bc1f30a62ba5e5a)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_parasail.rs (/opt/rustwide/target/debug/deps/test_parasail-b29d91b5da3bbddb)
[INFO] [stdout] 
[INFO] [stdout] running 36 tests
[INFO] [stdout] test aligner_construction ... ok
[INFO] [stdout] test get_cigar ... ok
[INFO] [stdout] test get_traceback_strings ... ok
[INFO] [stdout] test global_16bit ... ok
[INFO] [stdout] test global_32bit ... ok
[INFO] [stdout] test global_64bit ... ok
[INFO] [stdout] test global_8bit ... ok
[INFO] [stdout] test global_alignment ... ok
[INFO] [stdout] test global_with_profile ... ok
[INFO] [stdout] test global_with_stats ... ok
[INFO] [stdout] test length_col ... ok
[INFO] [stdout] test length_row ... ok
[INFO] [stdout] test local_alignment ... ok
[INFO] [stdout] test length_table ... ok
[INFO] [stdout] test local_with_profile ... ok
[INFO] [stdout] test local_with_stats ... ok
[INFO] [stdout] test match_col ... ok
[INFO] [stdout] test matches_row ... ok
[INFO] [stdout] test matches_table ... ok
[INFO] [stdout] test profile_construction ... ok
[INFO] [stdout] test print_traceback ... ok
[INFO] [stdout] test score_col ... ok
[INFO] [stdout] test semi_global_alignment ... ok
[INFO] [stdout] test similar_row ... ok
[INFO] [stdout] test similar_col ... ok
[INFO] [stdout] test score_table ... ok
[INFO] [stdout] test score_row ... ok
[INFO] [stdout] test test_banded_nw ... ok
[INFO] [stdout] test test_ssw_init ... ok
[INFO] [stdout] test multithread_global_alignment ... ok
[INFO] [stdout] test semi_global_with_stats ... ok
[INFO] [stdout] test similar_table ... ok
[INFO] [stdout] test trace_table ... ok
[INFO] [stdout] test test_ssw_alignment ... ok
[INFO] [stdout] test matrix_construction ... ok
[INFO] [stdout] test semi_global_with_profile ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 36 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] Target:       1 ACGT       4
[INFO] [stdout]                 ||||
[INFO] [stdout] Query:        1 ACGT       4
[INFO] [stdout] 
[INFO] [stdout] Length: 4
[INFO] [stdout] Identity:         4/4 (100.0%)
[INFO] [stdout] Similarity:       4/4 (100.0%)
[INFO] [stdout] Gaps:             0/4 ( 0.0%)
[INFO] [stdout] Score: 4
[INFO] [stderr]    Doc-tests parasail_rs
[INFO] [stdout] 
[INFO] [stdout] running 13 tests
[INFO] [stdout] test src/alignment/mod.rs - alignment::Alignment::get_score_table (line 106) - compile ... ok
[INFO] [stdout] test src/alignment/table.rs - alignment::table::TracebackTable<'a>::get_detailed (line 261) - compile ... ok
[INFO] [stdout] test src/alignment/table.rs - alignment::table::Table<'a>::get (line 66) - compile ... ok
[INFO] [stdout] test src/aligner/mod.rs - aligner::AlignerBuilder::allow_ref_gaps (line 180) - compile ... ok
[INFO] [stdout] test src/matrix/mod.rs - matrix::Matrix::from (line 52) - compile ... ok
[INFO] [stdout] test src/matrix/mod.rs - matrix::Matrix::set_value (line 215) - compile ... ok
[INFO] [stdout] test src/alignment/table.rs - alignment::table::TracebackTable<'a>::get (line 230) - compile ... ok
[INFO] [stdout] test src/alignment/table.rs - alignment::table::Table (line 12) - compile ... ok
[INFO] [stdout] test src/aligner/mod.rs - aligner::AlignerBuilder::allow_query_gaps (line 165) - compile ... ok
[INFO] [stdout] test src/alignment/table.rs - alignment::table::TracebackTable (line 180) - compile ... ok
[INFO] [stdout] test src/matrix/mod.rs - matrix::Matrix::to_pssm (line 174) - compile ... ok
[INFO] [stdout] test src/lib.rs - (line 42) ... FAILED
[INFO] [stdout] test src/lib.rs - (line 25) ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/lib.rs - (line 42) stdout ----
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note:  "cc" "-m64" "/tmp/rustdoctestyjlky9/rustchxYDIJ/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libparasail_rs-b4158a6ab7d01f16,libbitflags-45a928a3ec6c34f3,libderive_more-59e20ad5ebb756cb,liblog-a4263a0971f08dad,liblibparasail_sys-ad66e73c3d378ea1,liblibc-4aef7f866e20fd95}.rlib" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustdoctestyjlky9/rustchxYDIJ/raw-dylibs" "-B<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/libparasail-sys-7e0129968136bf52/out/parasail_build/build" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestyjlky9/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: collect2: fatal error: ld terminated with signal 7 [Bus error], core dumped
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 1 previous error
[INFO] [stdout] 
[INFO] [stdout] Couldn't compile the test.
[INFO] [stdout] ---- src/lib.rs - (line 25) stdout ----
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note:  "cc" "-m64" "/tmp/rustdoctestpwQCLc/rustcVazFUU/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libparasail_rs-b4158a6ab7d01f16,libbitflags-45a928a3ec6c34f3,libderive_more-59e20ad5ebb756cb,liblog-a4263a0971f08dad,liblibparasail_sys-ad66e73c3d378ea1,liblibc-4aef7f866e20fd95}.rlib" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustdoctestpwQCLc/rustcVazFUU/raw-dylibs" "-B<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/libparasail-sys-7e0129968136bf52/out/parasail_build/build" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestpwQCLc/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: PLEASE submit a bug report to https://github.com/llvm/llvm-project/issues/ and include the crash backtrace and instructions to reproduce the bug.
[INFO] [stdout]           LLVM ERROR: IO failure on output stream: No space left on device
[INFO] [stdout]           collect2: fatal error: ld terminated with signal 7 [Bus error], core dumped
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 1 previous error
[INFO] [stdout] 
[INFO] [stdout] Couldn't compile the test.
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/lib.rs - (line 25)
[INFO] [stdout]     src/lib.rs - (line 42)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 11 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.82s
[INFO] [stdout] 
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] running `Command { std: "docker" "inspect" "408a3bf772da83667e86c87093f5758a9baf4cd204201eaa8e59d38322144bf3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "408a3bf772da83667e86c87093f5758a9baf4cd204201eaa8e59d38322144bf3", kill_on_drop: false }`
[INFO] [stdout] 408a3bf772da83667e86c87093f5758a9baf4cd204201eaa8e59d38322144bf3
