[INFO] cloning repository https://github.com/pangenome/allwave
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/pangenome/allwave" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fallwave", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fallwave'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] cfdb9bbda552a4578284b9074404d03f2161df83
[INFO] checking pangenome/allwave against try#1c4199da70f816f2239f41c55168ff75a3663718 for pr-155499
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fallwave" "/workspace/builds/worker-7-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/pangenome/allwave
[INFO] finished tweaking git repo https://github.com/pangenome/allwave
[INFO] tweaked toml for git repo https://github.com/pangenome/allwave written to /workspace/builds/worker-7-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/pangenome/allwave on toolchain 1c4199da70f816f2239f41c55168ff75a3663718
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1c4199da70f816f2239f41c55168ff75a3663718" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/pangenome/allwave already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1c4199da70f816f2239f41c55168ff75a3663718" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1c4199da70f816f2239f41c55168ff75a3663718" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 06b335d56b1a35be42d1cbff896f31db197e7ccb85f9eedbc48d342737be6aba
[INFO] running `Command { std: "docker" "start" "-a" "06b335d56b1a35be42d1cbff896f31db197e7ccb85f9eedbc48d342737be6aba", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "06b335d56b1a35be42d1cbff896f31db197e7ccb85f9eedbc48d342737be6aba", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "06b335d56b1a35be42d1cbff896f31db197e7ccb85f9eedbc48d342737be6aba", kill_on_drop: false }`
[INFO] [stdout] 06b335d56b1a35be42d1cbff896f31db197e7ccb85f9eedbc48d342737be6aba
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1c4199da70f816f2239f41c55168ff75a3663718" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 37b8d6f897bd740b23abcc9b8f90b4ed1e32612be95b2d765f7c28dc4505a4a0
[INFO] running `Command { std: "docker" "start" "-a" "37b8d6f897bd740b23abcc9b8f90b4ed1e32612be95b2d765f7c28dc4505a4a0", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.174
[INFO] [stderr]    Compiling proc-macro2 v1.0.95
[INFO] [stderr]     Checking memchr v2.7.5
[INFO] [stderr]    Compiling libm v0.2.15
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling cc v1.2.29
[INFO] [stderr]    Compiling serde v1.0.219
[INFO] [stderr]    Compiling glob v0.3.2
[INFO] [stderr]    Compiling nom v5.1.3
[INFO] [stderr]     Checking zlib-rs v0.5.1
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling quote v1.0.40
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling syn v2.0.104
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]     Checking getrandom v0.2.16
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]     Checking crc32fast v1.4.2
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking bytemuck v1.23.1
[INFO] [stderr]     Checking libz-rs-sys v0.5.1
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling rustversion v1.0.21
[INFO] [stderr]    Compiling unicode-width v0.1.14
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking regex-automata v0.4.9
[INFO] [stderr]    Compiling libloading v0.8.8
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]     Checking flate2 v1.1.2
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling log v0.4.27
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling bindgen v0.55.1
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling ansi_term v0.12.1
[INFO] [stderr]    Compiling termcolor v1.4.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]     Checking regex v1.11.1
[INFO] [stderr]    Compiling cexpr v0.4.0
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]     Checking either v1.15.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]     Checking utf8parse v0.2.2
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]     Checking anstyle-parse v0.2.7
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]     Checking bstr v1.12.0
[INFO] [stderr]    Compiling serde_derive v1.0.219
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking hashbrown v0.15.4
[INFO] [stderr]     Checking safemem v0.3.3
[INFO] [stderr]    Compiling anyhow v1.0.98
[INFO] [stderr]     Checking colorchoice v1.0.4
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.1
[INFO] [stderr]     Checking anstyle v1.0.11
[INFO] [stderr]     Checking anstyle-query v1.1.3
[INFO] [stderr]     Checking indexmap v2.10.0
[INFO] [stderr]     Checking anstream v0.6.19
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking buf_redux v0.8.4
[INFO] [stderr]     Checking noodles-bgzf v0.37.0
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]     Checking noodles-core v0.17.0
[INFO] [stderr]     Checking xz2 v0.1.7
[INFO] [stderr]     Checking bzip2 v0.4.4
[INFO] [stderr]     Checking csv-core v0.1.12
[INFO] [stderr]     Checking strsim v0.11.1
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking clap_lex v0.7.5
[INFO] [stderr]     Checking bitflags v2.9.1
[INFO] [stderr]    Compiling lib_wfa2 v0.1.0 (https://github.com/ekg/lib_wfa2?rev=819b82cd842aabedcb962fd5b82380fe454234f6#819b82cd)
[INFO] [stderr]     Checking clap_builder v4.5.41
[INFO] [stderr]     Checking rayon v1.10.0
[INFO] [stderr]     Checking rustix v1.0.8
[INFO] [stderr] error: failed to run custom build command for `lib_wfa2 v0.1.0 (https://github.com/ekg/lib_wfa2?rev=819b82cd842aabedcb962fd5b82380fe454234f6#819b82cd)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/lib_wfa2-410ced50de965f07/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stderr
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (1386) panicked at /opt/rustwide/cargo-home/git/checkouts/lib_wfa2-c3eee27b1ab09b91/819b82c/build.rs:90:9:
[INFO] [stderr]   Failed to build WFA2-lib: Make failed: mkdir: cannot create directory 'bin': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'build': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'build': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'lib': Read-only file system
[INFO] [stderr]   make: *** [Makefile:70: setup] Error 1
[INFO] [stderr] 
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x63925cc5e1ca - std[ccca968540c01cc9]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x63925cc5e1ca - std[ccca968540c01cc9]::backtrace_rs::backtrace::trace_unsynchronized::<std[ccca968540c01cc9]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x63925cc5e1ca - std[ccca968540c01cc9]::sys::backtrace::_print_fmt
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/sys/backtrace.rs:74:9
[INFO] [stderr]      3:     0x63925cc5e1ca - <<std[ccca968540c01cc9]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[f51a453478e42253]::fmt::Display>::fmt
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/sys/backtrace.rs:44:26
[INFO] [stderr]      4:     0x63925cc6f79a - <core[f51a453478e42253]::fmt::rt::Argument>::fmt
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/core/src/fmt/rt.rs:152:76
[INFO] [stderr]      5:     0x63925cc6f79a - core[f51a453478e42253]::fmt::write
[INFO] [stderr]      6:     0x63925cc622d2 - std[ccca968540c01cc9]::io::default_write_fmt::<std[ccca968540c01cc9]::sys::stdio::unix::Stderr>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/io/mod.rs:621:11
[INFO] [stderr]      7:     0x63925cc622d2 - <std[ccca968540c01cc9]::sys::stdio::unix::Stderr as std[ccca968540c01cc9]::io::Write>::write_fmt
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/io/mod.rs:1976:13
[INFO] [stderr]      8:     0x63925cc43a9f - <std[ccca968540c01cc9]::sys::backtrace::BacktraceLock>::print
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/sys/backtrace.rs:47:9
[INFO] [stderr]      9:     0x63925cc43a9f - std[ccca968540c01cc9]::panicking::default_hook::{closure#0}
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:292:27
[INFO] [stderr]     10:     0x63925cc59e81 - std[ccca968540c01cc9]::panicking::default_hook
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:319:9
[INFO] [stderr]     11:     0x63925cc5a03b - std[ccca968540c01cc9]::panicking::panic_with_hook
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:825:13
[INFO] [stderr]     12:     0x63925cc43b58 - std[ccca968540c01cc9]::panicking::panic_handler::{closure#0}
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:698:13
[INFO] [stderr]     13:     0x63925cc38f79 - std[ccca968540c01cc9]::sys::backtrace::__rust_end_short_backtrace::<std[ccca968540c01cc9]::panicking::panic_handler::{closure#0}, !>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/sys/backtrace.rs:182:18
[INFO] [stderr]     14:     0x63925cc443bd - __rustc[e0820dc784133a37]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:689:5
[INFO] [stderr]     15:     0x63925cc6fe8c - core[f51a453478e42253]::panicking::panic_fmt
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/core/src/panicking.rs:80:14
[INFO] [stderr]     16:     0x63925cc29ad9 - build_script_build[498d13b7192d5be0]::main
[INFO] [stderr]     17:     0x63925cc2cc43 - <fn() as core[f51a453478e42253]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]     18:     0x63925cc291b6 - std[ccca968540c01cc9]::sys::backtrace::__rust_begin_short_backtrace::<fn(), ()>
[INFO] [stderr]     19:     0x63925cc296a9 - std[ccca968540c01cc9]::rt::lang_start::<()>::{closure#0}
[INFO] [stderr]     20:     0x63925cc59207 - <&dyn core[f51a453478e42253]::ops::function::Fn<(), Output = i32> + core[f51a453478e42253]::marker::Sync + core[f51a453478e42253]::panic::unwind_safe::RefUnwindSafe as core[f51a453478e42253]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     21:     0x63925cc59207 - std[ccca968540c01cc9]::panicking::catch_unwind::do_call::<&dyn core[f51a453478e42253]::ops::function::Fn<(), Output = i32> + core[f51a453478e42253]::marker::Sync + core[f51a453478e42253]::panic::unwind_safe::RefUnwindSafe, i32>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:581:40
[INFO] [stderr]     22:     0x63925cc59207 - std[ccca968540c01cc9]::panicking::catch_unwind::<i32, &dyn core[f51a453478e42253]::ops::function::Fn<(), Output = i32> + core[f51a453478e42253]::marker::Sync + core[f51a453478e42253]::panic::unwind_safe::RefUnwindSafe>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:544:19
[INFO] [stderr]     23:     0x63925cc59207 - std[ccca968540c01cc9]::panic::catch_unwind::<&dyn core[f51a453478e42253]::ops::function::Fn<(), Output = i32> + core[f51a453478e42253]::marker::Sync + core[f51a453478e42253]::panic::unwind_safe::RefUnwindSafe, i32>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panic.rs:359:14
[INFO] [stderr]     24:     0x63925cc59207 - std[ccca968540c01cc9]::rt::lang_start_internal::{closure#0}
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/rt.rs:175:24
[INFO] [stderr]     25:     0x63925cc59207 - std[ccca968540c01cc9]::panicking::catch_unwind::do_call::<std[ccca968540c01cc9]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:581:40
[INFO] [stderr]     26:     0x63925cc59207 - std[ccca968540c01cc9]::panicking::catch_unwind::<isize, std[ccca968540c01cc9]::rt::lang_start_internal::{closure#0}>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panicking.rs:544:19
[INFO] [stderr]     27:     0x63925cc59207 - std[ccca968540c01cc9]::panic::catch_unwind::<std[ccca968540c01cc9]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/panic.rs:359:14
[INFO] [stderr]     28:     0x63925cc59207 - std[ccca968540c01cc9]::rt::lang_start_internal
[INFO] [stderr]                                  at /rustc/1c4199da70f816f2239f41c55168ff75a3663718/library/std/src/rt.rs:171:5
[INFO] [stderr]     29:     0x63925cc28881 - std[ccca968540c01cc9]::rt::lang_start::<()>
[INFO] [stderr]     30:     0x63925cc2cfe5 - main
[INFO] [stderr]     31:     0x7a84d17591ca - <unknown>
[INFO] [stderr]     32:     0x7a84d175928b - __libc_start_main
[INFO] [stderr]     33:     0x63925cc27b95 - _start
[INFO] [stderr]     34:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "37b8d6f897bd740b23abcc9b8f90b4ed1e32612be95b2d765f7c28dc4505a4a0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "37b8d6f897bd740b23abcc9b8f90b4ed1e32612be95b2d765f7c28dc4505a4a0", kill_on_drop: false }`
[INFO] [stdout] 37b8d6f897bd740b23abcc9b8f90b4ed1e32612be95b2d765f7c28dc4505a4a0
