[INFO] cloning repository https://github.com/SebastianDall/methylation_utils [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/SebastianDall/methylation_utils" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSebastianDall%2Fmethylation_utils", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSebastianDall%2Fmethylation_utils'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 91baac28363b0787a944dc00ecd57bf8b29484a8 [INFO] checking SebastianDall/methylation_utils against try#3fada14ee01d755dc8076e611f11bf65b28ffd21 for pr-154971 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSebastianDall%2Fmethylation_utils" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/SebastianDall/methylation_utils [INFO] finished tweaking git repo https://github.com/SebastianDall/methylation_utils [INFO] tweaked toml for git repo https://github.com/SebastianDall/methylation_utils written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/SebastianDall/methylation_utils on toolchain 3fada14ee01d755dc8076e611f11bf65b28ffd21 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3fada14ee01d755dc8076e611f11bf65b28ffd21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/SebastianDall/methylation_utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3fada14ee01d755dc8076e611f11bf65b28ffd21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+3fada14ee01d755dc8076e611f11bf65b28ffd21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 18b2d915988c0773f816e014b1f047712eb79451aaf107f5d5d21dd02ab2e593 [INFO] running `Command { std: "docker" "start" "-a" "18b2d915988c0773f816e014b1f047712eb79451aaf107f5d5d21dd02ab2e593", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "18b2d915988c0773f816e014b1f047712eb79451aaf107f5d5d21dd02ab2e593", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "18b2d915988c0773f816e014b1f047712eb79451aaf107f5d5d21dd02ab2e593", kill_on_drop: false }` [INFO] [stdout] 18b2d915988c0773f816e014b1f047712eb79451aaf107f5d5d21dd02ab2e593 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+3fada14ee01d755dc8076e611f11bf65b28ffd21" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4ea27b2175d37e8cb5e7eb46ff2e80882193a15ea7303dd46d78d4ae3654c7ab [INFO] running `Command { std: "docker" "start" "-a" "4ea27b2175d37e8cb5e7eb46ff2e80882193a15ea7303dd46d78d4ae3654c7ab", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.105 [INFO] [stderr] Compiling unicode-ident v1.0.22 [INFO] [stderr] Compiling libc v0.2.179 [INFO] [stderr] Compiling quote v1.0.43 [INFO] [stderr] Checking memchr v2.7.6 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling version_check v0.9.5 [INFO] [stderr] Compiling find-msvc-tools v0.1.6 [INFO] [stderr] Compiling target-lexicon v0.13.4 [INFO] [stderr] Checking regex-syntax v0.8.8 [INFO] [stderr] Compiling autocfg v1.5.0 [INFO] [stderr] Compiling once_cell v1.21.3 [INFO] [stderr] Compiling zerocopy v0.8.33 [INFO] [stderr] Checking equivalent v1.0.2 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Checking bitflags v2.10.0 [INFO] [stderr] Checking either v1.15.0 [INFO] [stderr] Compiling cc v1.2.51 [INFO] [stderr] Compiling getrandom v0.3.4 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking bytes v1.11.0 [INFO] [stderr] Checking hashbrown v0.16.1 [INFO] [stderr] Checking ryu v1.0.22 [INFO] [stderr] Compiling indoc v2.0.7 [INFO] [stderr] Checking unindent v0.2.4 [INFO] [stderr] Checking smallvec v1.15.1 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Checking aho-corasick v1.1.4 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Checking foldhash v0.1.5 [INFO] [stderr] Checking allocator-api2 v0.2.21 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Compiling signal-hook v0.3.18 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking array-init-cursor v0.2.1 [INFO] [stderr] Compiling slotmap v1.1.1 [INFO] [stderr] Compiling rustix v1.1.3 [INFO] [stderr] Compiling polars-utils v0.51.0 [INFO] [stderr] Checking indexmap v2.13.0 [INFO] [stderr] Compiling pyo3-build-config v0.25.1 [INFO] [stderr] Checking simdutf8 v0.1.5 [INFO] [stderr] Checking crossbeam-deque v0.8.6 [INFO] [stderr] Checking siphasher v1.0.1 [INFO] [stderr] Compiling object v0.32.2 [INFO] [stderr] Compiling syn v2.0.114 [INFO] [stderr] Checking linux-raw-sys v0.11.0 [INFO] [stderr] Compiling cmake v0.1.57 [INFO] [stderr] Checking static_assertions v1.1.0 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Checking iana-time-zone v0.1.64 [INFO] [stderr] Checking phf_shared v0.12.1 [INFO] [stderr] Compiling polars-schema v0.51.0 [INFO] [stderr] Checking raw-cpuid v11.6.0 [INFO] [stderr] Checking parking_lot_core v0.9.12 [INFO] [stderr] Checking rayon v1.11.0 [INFO] [stderr] Checking errno v0.3.14 [INFO] [stderr] Checking chrono v0.4.42 [INFO] [stderr] Checking memmap2 v0.9.9 [INFO] [stderr] Checking signal-hook-registry v1.4.8 [INFO] [stderr] Checking rand_core v0.9.3 [INFO] [stderr] Checking uuid v1.19.0 [INFO] [stderr] Checking castaway v0.2.4 [INFO] [stderr] Checking parking_lot v0.12.5 [INFO] [stderr] Checking lexical-util v1.0.7 [INFO] [stderr] Checking adler2 v2.0.1 [INFO] [stderr] Checking simd-adler32 v0.3.8 [INFO] [stderr] Checking regex-automata v0.4.13 [INFO] [stderr] Checking zlib-rs v0.5.5 [INFO] [stderr] Compiling chrono-tz v0.10.4 [INFO] [stderr] Checking miniz_oxide v0.8.9 [INFO] [stderr] Checking phf v0.12.1 [INFO] [stderr] Compiling polars-arrow v0.51.0 [INFO] [stderr] Compiling stacker v0.1.22 [INFO] [stderr] Compiling libz-ng-sys v1.1.23 [INFO] [stderr] Compiling thiserror v2.0.17 [INFO] [stderr] Checking crossbeam-channel v0.5.15 [INFO] [stderr] Checking streaming-iterator v0.1.9 [INFO] [stderr] Checking dyn-clone v1.0.20 [INFO] [stderr] Checking ethnum v1.5.2 [INFO] [stderr] Checking lexical-write-integer v1.0.6 [INFO] [stderr] Checking lexical-parse-integer v1.0.6 [INFO] [stderr] Compiling polars-compute v0.51.0 [INFO] [stderr] Checking debug_unsafe v0.1.3 [INFO] [stderr] Checking bit-vec v0.8.0 [INFO] [stderr] Checking utf8parse v0.2.2 [INFO] [stderr] Checking atoi_simd v0.16.1 [INFO] [stderr] Checking lexical-parse-float v1.0.6 [INFO] [stderr] Checking lexical-write-float v1.0.6 [INFO] [stderr] Checking anstyle-parse v0.2.7 [INFO] [stderr] Checking unicode-width v0.2.2 [INFO] [stderr] Checking strength_reduce v0.2.4 [INFO] [stderr] Checking anstyle-query v1.1.5 [INFO] [stderr] Checking fast-float2 v0.2.3 [INFO] [stderr] Compiling litrs v1.0.0 [INFO] [stderr] Checking is_terminal_polyfill v1.70.2 [INFO] [stderr] Checking anstyle v1.0.13 [INFO] [stderr] Checking colorchoice v1.0.4 [INFO] [stderr] Checking boxcar v0.2.14 [INFO] [stderr] Checking lexical-core v1.0.6 [INFO] [stderr] Compiling anyhow v1.0.100 [INFO] [stderr] Compiling polars-core v0.51.0 [INFO] [stderr] Compiling pyo3-ffi v0.25.1 [INFO] [stderr] Compiling pyo3-macros-backend v0.25.1 [INFO] [stderr] Compiling pyo3 v0.25.1 [INFO] [stderr] Checking anstream v0.6.21 [INFO] [stderr] Checking unicode-segmentation v1.12.0 [INFO] [stderr] Checking libz-rs-sys v0.5.5 [INFO] [stderr] Compiling libm v0.2.15 [INFO] [stderr] Checking clap_lex v0.7.6 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Checking clap_builder v4.5.54 [INFO] [stderr] Compiling document-features v0.2.12 [INFO] [stderr] Compiling polars-ops v0.51.0 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Checking xxhash-rust v0.8.15 [INFO] [stderr] Checking argminmax v0.6.3 [INFO] [stderr] Checking csv-core v0.1.13 [INFO] [stderr] Checking regex v1.12.2 [INFO] [stderr] Checking bstr v1.12.1 [INFO] [stderr] Checking fastrand v2.3.0 [INFO] [stderr] Compiling ar_archive_writer v0.2.0 [INFO] [stderr] Checking jiff v0.2.18 [INFO] [stderr] Checking csv v1.4.0 [INFO] [stderr] Checking now v0.1.3 [INFO] [stderr] Checking tempfile v3.24.0 [INFO] [stderr] Checking env_filter v0.1.4 [INFO] [stderr] Checking crossterm v0.29.0 [INFO] [stderr] Checking bytesize v1.3.3 [INFO] [stderr] Checking fallible-streaming-iterator v0.1.9 [INFO] [stderr] Checking humantime v2.3.0 [INFO] [stderr] Checking noodles-core v0.18.0 [INFO] [stderr] Checking noodles-fastq v0.21.0 [INFO] [stderr] Checking buffer-redux v1.0.2 [INFO] [stderr] Checking streaming-decompression v0.1.2 [INFO] [stderr] Compiling polars v0.51.0 [INFO] [stderr] Compiling portable-atomic v1.13.0 [INFO] [stderr] Checking home v0.5.12 [INFO] [stderr] Checking polars-parquet-format v0.1.0 [INFO] [stderr] Checking scoped_threadpool v0.1.9 [INFO] [stderr] Checking glob v0.3.3 [INFO] [stderr] Checking console v0.15.11 [INFO] [stderr] Compiling zmij v1.0.12 [INFO] [stderr] Checking comfy-table v7.2.1 [INFO] [stderr] Checking number_prefix v0.4.0 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling psm v0.1.28 [INFO] [stderr] Checking ciborium-io v0.2.2 [INFO] [stderr] Checking plotters-backend v0.3.7 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking cast v0.3.0 [INFO] [stderr] Checking is-terminal v0.4.17 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Checking oorandom v11.1.5 [INFO] [stderr] Checking anes v0.1.6 [INFO] [stderr] Checking walkdir v2.5.0 [INFO] [stderr] Checking plotters-svg v0.3.7 [INFO] [stderr] Checking plotters v0.3.7 [INFO] [stderr] Checking indicatif v0.17.11 [INFO] [stderr] Compiling zerocopy-derive v0.8.33 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling bytemuck_derive v1.10.2 [INFO] [stderr] Compiling thiserror-impl v2.0.17 [INFO] [stderr] Compiling strum_macros v0.27.2 [INFO] [stderr] Compiling clap_derive v4.5.49 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Checking criterion-plot v0.5.0 [INFO] [stderr] Checking bytemuck v1.24.0 [INFO] [stderr] Checking clap v4.5.54 [INFO] [stderr] Compiling pyo3-macros v0.25.1 [INFO] [stderr] Checking env_logger v0.11.8 [INFO] [stderr] Checking ppv-lite86 v0.2.21 [INFO] [stderr] Checking half v2.7.1 [INFO] [stderr] Checking hashbrown v0.15.5 [INFO] [stderr] Checking compact_str v0.9.0 [INFO] [stderr] Checking seq_io v0.3.4 [INFO] [stderr] Checking tinytemplate v1.2.1 [INFO] [stderr] Checking ciborium-ll v0.2.2 [INFO] [stderr] Checking rand_chacha v0.9.0 [INFO] [stderr] Checking ciborium v0.2.2 [INFO] [stderr] Checking rand v0.9.2 [INFO] [stderr] Checking planus v1.1.1 [INFO] [stderr] Checking criterion v0.5.1 [INFO] [stderr] Checking skiplist v0.6.0 [INFO] [stderr] Checking polars-arrow-format v0.2.1 [INFO] [stderr] Checking polars-error v0.51.0 [INFO] [stderr] Checking flate2 v1.1.5 [INFO] [stderr] Checking noodles-bgzf v0.45.0 [INFO] [stderr] Checking noodles-csi v0.53.0 [INFO] [stderr] Checking noodles-sam v0.81.0 [INFO] [stderr] Checking noodles-tabix v0.59.0 [INFO] [stderr] Checking epimetheus-methylome v1.1.1 (/opt/rustwide/workdir/methylome) [INFO] [stderr] Checking noodles-bam v0.85.0 [INFO] [stderr] Checking epimetheus-core v0.7.7 (/opt/rustwide/workdir/epimetheus-core) [INFO] [stderr] Checking epimetheus-io v0.8.1 (/opt/rustwide/workdir/epimetheus-io) [INFO] [stderr] Checking polars-dtype v0.51.0 [INFO] [stderr] Checking polars-row v0.51.0 [INFO] [stderr] Checking polars-parquet v0.51.0 [INFO] [stderr] Checking polars-time v0.51.0 [INFO] [stderr] Checking polars-io v0.51.0 [INFO] [stderr] Checking epimetheus-orchestration v0.8.2 (/opt/rustwide/workdir/epimetheus-orchestration) [INFO] [stderr] Checking pyo3-polars v0.24.0 [INFO] [stderr] Checking epimetheus v0.8.2 (/opt/rustwide/workdir/epimetheus-cli) [INFO] [stderr] Checking epimetheus-py v0.7.9 (/opt/rustwide/workdir/epimetheus-py) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 39.23s [INFO] running `Command { std: "docker" "inspect" "4ea27b2175d37e8cb5e7eb46ff2e80882193a15ea7303dd46d78d4ae3654c7ab", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4ea27b2175d37e8cb5e7eb46ff2e80882193a15ea7303dd46d78d4ae3654c7ab", kill_on_drop: false }` [INFO] [stdout] 4ea27b2175d37e8cb5e7eb46ff2e80882193a15ea7303dd46d78d4ae3654c7ab