[INFO] cloning repository https://github.com/genhub-bio/gen
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/genhub-bio/gen" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenhub-bio%2Fgen", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenhub-bio%2Fgen'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 38f53aabf9323587950d46be8d1d0fab9dcd7649
[INFO] checking genhub-bio/gen against master#2972b5e59f1c5529b6ba770437812fd83ab4ebd4 for pr-154781
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenhub-bio%2Fgen" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/genhub-bio/gen
[INFO] finished tweaking git repo https://github.com/genhub-bio/gen
[INFO] tweaked toml for git repo https://github.com/genhub-bio/gen written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/genhub-bio/gen on toolchain 2972b5e59f1c5529b6ba770437812fd83ab4ebd4
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2972b5e59f1c5529b6ba770437812fd83ab4ebd4" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/genhub-bio/gen already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2972b5e59f1c5529b6ba770437812fd83ab4ebd4" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded rand_core v0.10.1
[INFO] [stderr]   Downloaded lru v0.16.4
[INFO] [stderr]   Downloaded bon-macros v3.9.1
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[INFO] [stderr]   Downloaded instability v0.3.12
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[INFO] [stderr]   Downloaded lcov2cobertura v1.0.9
[INFO] [stderr]   Downloaded circular v0.3.0
[INFO] [stderr]   Downloaded rat-cursor v2.0.0
[INFO] [stderr]   Downloaded rustc-stable-hash v0.1.2
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[INFO] [stderr]   Downloaded cfg-expr v0.20.7
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[INFO] [stderr]   Downloaded cargo-llvm-cov v0.6.24
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[INFO] [stderr]   Downloaded noodles-vcf v0.81.0
[INFO] [stderr]   Downloaded cached v0.55.1
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[INFO] [stderr]   Downloaded noodles-bam v0.83.0
[INFO] [stderr]   Downloaded noodles-gff v0.52.0
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[INFO] [stderr]   Downloaded krates v0.21.1
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[INFO] [stderr]   Downloaded noodles-csi v0.51.0
[INFO] [stderr]   Downloaded noodles v0.101.0
[INFO] [stderr]   Downloaded duct v1.1.1
[INFO] [stderr]   Downloaded gb-io v0.8.0
[INFO] [stderr]   Downloaded format_num_pattern v0.9.4
[INFO] [stderr]   Downloaded iset v0.3.1
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[INFO] [stderr]   Downloaded capnpc v0.24.1
[INFO] [stderr]   Downloaded noodles-bgzf v0.43.0
[INFO] [stderr]   Downloaded noodles-tabix v0.57.0
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[INFO] [stderr]   Downloaded lexopt v0.3.2
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[INFO] [stderr]   Downloaded noodles-bed v0.28.0
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[INFO] [stderr]   Downloaded noodles-fastq v0.21.0
[INFO] [stderr]   Downloaded lexical-core v1.0.6
[INFO] [stderr]   Downloaded rat-reloc v2.0.2
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[INFO] [stderr]   Downloaded embedded-io v0.7.1
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[INFO] [stderr]   Downloaded noodles-cram v0.86.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+2972b5e59f1c5529b6ba770437812fd83ab4ebd4" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 077f6fa6bc3cd652376739f5f3a400e9c04a2a34463a6f5e944eaf836b96d659
[INFO] running `Command { std: "docker" "start" "-a" "077f6fa6bc3cd652376739f5f3a400e9c04a2a34463a6f5e944eaf836b96d659", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "077f6fa6bc3cd652376739f5f3a400e9c04a2a34463a6f5e944eaf836b96d659", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "077f6fa6bc3cd652376739f5f3a400e9c04a2a34463a6f5e944eaf836b96d659", kill_on_drop: false }`
[INFO] [stdout] 077f6fa6bc3cd652376739f5f3a400e9c04a2a34463a6f5e944eaf836b96d659
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+2972b5e59f1c5529b6ba770437812fd83ab4ebd4" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1b6124b2d196ac94a3b19f5aee141820ce7727792232f672538540de9f58b156
[INFO] running `Command { std: "docker" "start" "-a" "1b6124b2d196ac94a3b19f5aee141820ce7727792232f672538540de9f58b156", kill_on_drop: false }`
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]     Checking bitflags v2.11.1
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]     Checking futures-util v0.3.32
[INFO] [stderr]     Checking tokio v1.52.0
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]     Checking zlib-rs v0.6.3
[INFO] [stderr]    Compiling darling_core v0.23.0
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]     Checking rand_core v0.10.1
[INFO] [stderr]    Compiling getrandom v0.4.2
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]     Checking rustix v1.1.4
[INFO] [stderr]     Checking unicode-segmentation v1.13.2
[INFO] [stderr]     Checking ahash v0.8.12
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling strum_macros v0.27.2
[INFO] [stderr]    Compiling capnp v0.24.1
[INFO] [stderr]     Checking unicode-truncate v2.0.1
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]     Checking compact_str v0.9.0
[INFO] [stderr]     Checking hashbrown v0.14.5
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking regex-automata v0.4.14
[INFO] [stderr]     Checking lru v0.16.4
[INFO] [stderr]     Checking kasuari v0.4.12
[INFO] [stderr]     Checking cpufeatures v0.3.0
[INFO] [stderr]    Compiling libm v0.2.16
[INFO] [stderr]     Checking chacha20 v0.10.0
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]    Compiling instability v0.3.12
[INFO] [stderr]     Checking sha2 v0.10.9
[INFO] [stderr]     Checking rand v0.10.1
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]     Checking hashlink v0.9.1
[INFO] [stderr]    Compiling anyhow v1.0.102
[INFO] [stderr]    Compiling darling_core v0.20.11
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]     Checking serde_json v1.0.149
[INFO] [stderr]     Checking idna_adapter v1.2.1
[INFO] [stderr]    Compiling capnpc v0.24.1
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking signal-hook v0.3.18
[INFO] [stderr]    Compiling derive_more-impl v2.1.1
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking strum v0.27.2
[INFO] [stderr]     Checking uuid v1.23.0
[INFO] [stderr]     Checking ratatui-core v0.1.0
[INFO] [stderr]     Checking signal-hook-mio v0.2.5
[INFO] [stderr]     Checking futures v0.3.32
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]     Checking regex v1.12.3
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr]     Checking http v1.4.0
[INFO] [stderr]     Checking pure-rust-locales v0.8.2
[INFO] [stderr]     Checking derive_more v2.1.1
[INFO] [stderr]     Checking time v0.3.47
[INFO] [stderr]     Checking crossterm v0.29.0
[INFO] [stderr]    Compiling darling_macro v0.23.0
[INFO] [stderr]     Checking line-clipping v0.3.7
[INFO] [stderr]     Checking intervaltree v0.2.7
[INFO] [stderr]    Compiling include_dir_macros v0.7.4
[INFO] [stderr]     Checking interavl v0.3.0
[INFO] [stderr]    Compiling rusqlite_migration v1.3.1
[INFO] [stderr]    Compiling darling v0.23.0
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[INFO] [stderr]     Checking getrandom v0.2.17
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[INFO] [stderr]    Compiling siphasher v1.0.2
[INFO] [stderr]     Checking anstyle-parse v1.0.0
[INFO] [stderr]    Compiling prettyplease v0.2.37
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]    Compiling gen-capnp-schemas v0.1.30 (/opt/rustwide/workdir/gen-capnp-schemas)
[INFO] [stderr]     Checking colorchoice v1.0.5
[INFO] [stderr]    Compiling phf_shared v0.11.3
[INFO] [stderr]     Checking anstyle v1.0.14
[INFO] [stderr]    Compiling heapless v0.8.0
[INFO] [stderr]    Compiling rustls v0.23.38
[INFO] [stderr]     Checking anstream v1.0.0
[INFO] [stderr]    Compiling phf_generator v0.11.3
[INFO] [stderr]     Checking hash32 v0.3.1
[INFO] [stderr]     Checking noodles-bgzf v0.43.0
[INFO] [stderr]    Compiling camino v1.2.2
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[INFO] [stderr]    Compiling bon-macros v3.9.1
[INFO] [stderr]    Compiling portable-atomic v1.13.1
[INFO] [stderr]     Checking anpa v0.10.0
[INFO] [stderr]     Checking str_indices v0.4.4
[INFO] [stderr]    Compiling target-lexicon v0.13.3
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[INFO] [stderr]     Checking noodles-fasta v0.56.0
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[INFO] [stderr]     Checking tower v0.5.3
[INFO] [stderr]     Checking gen-sugiyama v0.1.30 (/opt/rustwide/workdir/gen-sugiyama)
[INFO] [stderr]     Checking hyper-util v0.1.20
[INFO] [stderr]    Compiling darling_macro v0.20.11
[INFO] [stderr]    Compiling gb-io v0.8.0
[INFO] [stderr]     Checking codespan-reporting v0.13.1
[INFO] [stderr]     Checking noodles-tabix v0.57.0
[INFO] [stderr]     Checking noodles-gff v0.52.0
[INFO] [stderr]    Compiling darling v0.20.11
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]    Compiling cached_proc_macro v0.24.0
[INFO] [stderr]     Checking rat-reloc v2.0.2
[INFO] [stderr]    Compiling clap_derive v4.6.0
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[INFO] [stderr]     Checking ratatui-macros v0.7.0
[INFO] [stderr]     Checking precomputed-hash v0.1.1
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[INFO] [stderr]     Checking ftree v1.3.0
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[INFO] [stderr]     Checking serde_yaml v0.9.34+deprecated
[INFO] [stderr]    Compiling getrandom v0.3.4
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[INFO] [stderr]     Checking serde_bytes v0.11.19
[INFO] [stderr]     Checking unicode-display-width v0.3.0
[INFO] [stderr]    Compiling fs-err v3.3.0
[INFO] [stderr]     Checking cached v0.55.1
[INFO] [stderr]     Checking csv-core v0.1.13
[INFO] [stderr]    Compiling scroll_derive v0.13.1
[INFO] [stderr]     Checking iset v0.3.1
[INFO] [stderr]     Checking circular v0.3.0
[INFO] [stderr]     Checking fixedbitset v0.5.7
[INFO] [stderr]     Checking rat-cursor v2.0.0
[INFO] [stderr]     Checking unit-prefix v0.5.2
[INFO] [stderr]     Checking chrono v0.4.44
[INFO] [stderr]     Checking format_num_pattern v0.9.4
[INFO] [stderr]     Checking rustc-hash v2.1.2
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[INFO] [stderr]     Checking toml v1.1.2+spec-1.1.0
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[INFO] [stderr]     Checking rustls-webpki v0.103.12
[INFO] [stderr]     Checking csv v1.4.0
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[INFO] [stderr]     Checking noodles v0.101.0
[INFO] [stderr]     Checking directories v6.0.0
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[INFO] [stderr]     Checking webbrowser v1.2.0
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[INFO] [stderr]     Checking smol_str v0.3.6
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[INFO] [stderr]    Compiling strum_macros v0.28.0
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[INFO] [stderr]     Checking os_pipe v1.2.3
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[INFO] [stderr]     Checking lcov2cobertura v1.0.9
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[INFO] [stderr]     Checking opener v0.8.4
[INFO] [stderr]     Checking memmap2 v0.9.10
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[INFO] [stderr]     Checking shell-escape v0.1.5
[INFO] [stderr]     Checking sdd v3.0.10
[INFO] [stderr]     Checking futures-executor v0.3.32
[INFO] [stderr]     Checking is-terminal v0.4.17
[INFO] [stderr]    Compiling serial_test_derive v3.4.0
[INFO] [stderr]     Checking similar v2.7.0
[INFO] [stderr]     Checking env_logger v0.11.10
[INFO] [stderr]     Checking humantime v2.3.0
[INFO] [stderr]     Checking scc v2.4.0
[INFO] [stderr]     Checking env_logger v0.10.2
[INFO] [stderr]     Checking insta v1.47.2
[INFO] [stderr]     Checking spdx v0.13.4
[INFO] [stderr]     Checking strum v0.28.0
[INFO] [stderr]    Compiling libsqlite3-sys v0.30.1
[INFO] [stderr]     Checking bon v3.9.1
[INFO] [stderr]     Checking tachyonfx v0.23.0
[INFO] [stderr]     Checking cargo-llvm-cov v0.6.24
[INFO] [stderr]     Checking serial_test v3.4.0
[INFO] [stderr]     Checking cargo-deny v0.19.2
[INFO] [stderr]     Checking tokio-rustls v0.26.4
[INFO] [stderr]     Checking hyper-rustls v0.27.9
[INFO] [stderr]     Checking reqwest v0.12.28
[INFO] [stderr]     Checking gen-tui v0.1.30 (/opt/rustwide/workdir/gen-tui)
[INFO] [stdout] warning: unused return value of `std::option::Option::<T>::is_some` that must be used
[INFO] [stdout]     --> gen-tui/src/graph_controller.rs:1125:9
[INFO] [stdout]      |
[INFO] [stdout] 1125 |         state.camera_anim.is_some();
[INFO] [stdout]      |         ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]      |
[INFO] [stdout]      = note: if you intended to assert that this has a value, consider `.unwrap()` instead
[INFO] [stdout]      = note: `#[warn(unused_must_use)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: use `let _ = ...` to ignore the resulting value
[INFO] [stdout]      |
[INFO] [stdout] 1125 |         let _ = state.camera_anim.is_some();
[INFO] [stdout]      |         +++++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Checking rusqlite v0.32.1
[INFO] [stderr]     Checking gen-core v0.1.30 (/opt/rustwide/workdir/gen-core)
[INFO] [stderr]     Checking gen-graph v0.1.30 (/opt/rustwide/workdir/gen-graph)
[INFO] [stderr]     Checking gen-models v0.1.30 (/opt/rustwide/workdir/gen-models)
[INFO] [stderr]     Checking gen-annotations v0.1.30 (/opt/rustwide/workdir/gen-annotations)
[INFO] [stderr]     Checking gen-diff v0.1.30 (/opt/rustwide/workdir/gen-diff)
[INFO] [stderr]     Checking gen v0.1.30 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 50s
[INFO] running `Command { std: "docker" "inspect" "1b6124b2d196ac94a3b19f5aee141820ce7727792232f672538540de9f58b156", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1b6124b2d196ac94a3b19f5aee141820ce7727792232f672538540de9f58b156", kill_on_drop: false }`
[INFO] [stdout] 1b6124b2d196ac94a3b19f5aee141820ce7727792232f672538540de9f58b156