[INFO] cloning repository https://github.com/Joon-Klaps/rust-python-tree-distances
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Joon-Klaps/rust-python-tree-distances" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJoon-Klaps%2Frust-python-tree-distances", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJoon-Klaps%2Frust-python-tree-distances'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4288e3ceda1a471e4191f30adc34172a0c28a829
[INFO] checking Joon-Klaps/rust-python-tree-distances against 65b20a97de33e9e59992793a144aef2950c48c76 for pr-154715
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJoon-Klaps%2Frust-python-tree-distances" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Joon-Klaps/rust-python-tree-distances
[INFO] finished tweaking git repo https://github.com/Joon-Klaps/rust-python-tree-distances
[INFO] tweaked toml for git repo https://github.com/Joon-Klaps/rust-python-tree-distances written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Joon-Klaps/rust-python-tree-distances on toolchain 65b20a97de33e9e59992793a144aef2950c48c76
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+65b20a97de33e9e59992793a144aef2950c48c76" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+65b20a97de33e9e59992793a144aef2950c48c76" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating git repository `https://github.com/Joon-Klaps/phylotree-rs`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking Joon-Klaps/rust-python-tree-distances against 65b20a97de33e9e59992793a144aef2950c48c76 for pr-154715
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJoon-Klaps%2Frust-python-tree-distances" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Joon-Klaps/rust-python-tree-distances
[INFO] finished tweaking git repo https://github.com/Joon-Klaps/rust-python-tree-distances
[INFO] tweaked toml for git repo https://github.com/Joon-Klaps/rust-python-tree-distances written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Joon-Klaps/rust-python-tree-distances on toolchain 65b20a97de33e9e59992793a144aef2950c48c76
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+65b20a97de33e9e59992793a144aef2950c48c76" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+65b20a97de33e9e59992793a144aef2950c48c76" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating git repository `https://github.com/Joon-Klaps/phylotree-rs`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]      Locking 207 packages to latest Rust 1.99.0-nightly compatible versions
[INFO] [stderr]       Adding codspeed-divan-compat v4.7.0 (available: v5.0.1)
[INFO] [stderr]       Adding divan-macros v0.1.17 (available: v0.1.21)
[INFO] [stderr]       Adding pyo3 v0.27.2 (available: v0.29.2)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+65b20a97de33e9e59992793a144aef2950c48c76" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-build-config v0.27.2
[INFO] [stderr]   Downloaded utf8-read v0.4.0
[INFO] [stderr]   Downloaded numeric_literals v0.2.0
[INFO] [stderr]   Downloaded pyo3-macros v0.27.2
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.27.2
[INFO] [stderr]   Downloaded serde-hjson v0.9.1
[INFO] [stderr]   Downloaded tint v1.0.1
[INFO] [stderr]   Downloaded pyo3-ffi v0.27.2
[INFO] [stderr]   Downloaded memory-stats v1.2.0
[INFO] [stderr]   Downloaded ptree v0.4.0
[INFO] [stderr]   Downloaded accurate v0.3.1
[INFO] [stderr]   Downloaded divan-macros v0.1.17
[INFO] [stderr]   Downloaded codspeed-divan-compat-macros v4.7.0
[INFO] [stderr]   Downloaded cpu-time v1.0.0
[INFO] [stderr]   Downloaded codspeed-divan-compat v4.7.0
[INFO] [stderr]   Downloaded nom v5.1.3
[INFO] [stderr]   Downloaded codspeed-divan-compat-walltime v4.7.0
[INFO] [stderr]   Downloaded codspeed v4.7.0
[INFO] [stderr]   Downloaded pyo3 v0.27.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:00c5645b54fe3ce5dae1417175e3c7fb6a6646c021d554ecd63a097b8b9f3602" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272
[INFO] running `Command { std: "docker" "start" "bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272" "/opt/rustwide/cargo-home/bin/cargo" "+65b20a97de33e9e59992793a144aef2950c48c76" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272" "/opt/rustwide/cargo-home/bin/cargo" "+65b20a97de33e9e59992793a144aef2950c48c76" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.189
[INFO] [stderr]    Compiling serde_core v1.0.229
[INFO] [stderr]     Checking memchr v2.8.3
[INFO] [stderr]     Checking bitflags v2.13.1
[INFO] [stderr]    Compiling zerocopy v0.8.56
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling serde v1.0.229
[INFO] [stderr]    Compiling syn v2.0.119
[INFO] [stderr]    Compiling cc v1.4.3
[INFO] [stderr]     Checking either v1.17.0
[INFO] [stderr]    Compiling crossbeam-deque v0.8.7
[INFO] [stderr]     Checking crossbeam-epoch v0.9.20
[INFO] [stderr]    Compiling lexical-core v0.7.6
[INFO] [stderr]    Compiling nom v5.1.3
[INFO] [stderr]     Checking arrayvec v0.5.2
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking num-traits v0.1.43
[INFO] [stderr]    Compiling matrixmultiply v0.3.11
[INFO] [stderr]     Checking serde v0.8.23
[INFO] [stderr]    Compiling cfg_aliases v0.2.2
[INFO] [stderr]    Compiling nix v0.31.3
[INFO] [stderr]     Checking ordered-float v2.10.1
[INFO] [stderr]     Checking rust-ini v0.13.0
[INFO] [stderr]     Checking lazy_static v0.2.11
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking tint v1.0.1
[INFO] [stderr]    Compiling toml_parser v1.1.3+spec-1.1.0
[INFO] [stderr]     Checking aho-corasick v1.1.5
[INFO] [stderr]     Checking num-integer v0.1.47
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[INFO] [stderr]     Checking simd-adler32 v0.3.10
[INFO] [stderr]    Compiling toml_datetime v1.1.1+spec-1.1.0
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[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]     Checking ndarray v0.16.1
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[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]    Compiling toml_edit v0.25.13+spec-1.1.0
[INFO] [stderr]     Checking utf8-read v0.4.0
[INFO] [stderr]     Checking glob v0.3.4
[INFO] [stderr]    Compiling itertools v0.14.0
[INFO] [stderr]    Compiling codspeed v4.7.0
[INFO] [stderr]    Compiling alloca v0.4.0
[INFO] [stderr]     Checking flate2 v1.1.9
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[INFO] [stderr]     Checking itertools v0.13.0
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[INFO] [stderr]    Compiling codspeed-divan-compat v4.7.0
[INFO] [stderr]     Checking getrandom v0.2.17
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[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking directories v4.0.1
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[INFO] [stderr]    Compiling proc-macro-crate v3.5.0
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[INFO] [stderr]     Checking rand v0.10.2
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[INFO] [stderr]     Checking criterion-plot v0.8.2
[INFO] [stderr]     Checking toml v0.5.11
[INFO] [stderr]     Checking serde-value v0.7.0
[INFO] [stderr]     Checking serde-hjson v0.9.1
[INFO] [stderr]     Checking tinytemplate v1.2.1
[INFO] [stderr]    Compiling zerocopy-derive v0.8.56
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling divan-macros v0.1.17
[INFO] [stderr]     Checking config v0.11.0
[INFO] [stderr]    Compiling trait-set v0.3.0
[INFO] [stderr]    Compiling numeric_literals v0.2.0
[INFO] [stderr]     Checking clap v4.6.6
[INFO] [stderr]     Checking ptree v0.4.0
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]    Compiling codspeed-divan-compat-macros v4.7.0
[INFO] [stderr]     Checking codspeed-divan-compat-walltime v4.7.0
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]     Checking half v2.7.1
[INFO] [stderr]     Checking ciborium-ll v0.2.2
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking ciborium v0.2.2
[INFO] [stderr]     Checking rand v0.8.7
[INFO] [stderr]     Checking criterion v0.8.2
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking phylotree v0.1.3 (https://github.com/Joon-Klaps/phylotree-rs?rev=a2391b7#a2391b79)
[INFO] [stderr]     Checking rapidtrees v0.8.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 36.69s
[INFO] running `Command { std: "docker" "inspect" "bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272", kill_on_drop: false }`
[INFO] [stdout] bbe8b2b723278a3140bfda60fa9561a819a5d6ed4adb08a54c3791c8f60af272
