[INFO] cloning repository https://github.com/10XGenomics/bamtofastq
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/10XGenomics/bamtofastq" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fbamtofastq", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fbamtofastq'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 3a1d8b8192ac18d331554209d604db7809eb9bf6
[INFO] checking 10XGenomics/bamtofastq against master#4cf5f9580233c36f6bc8db76e282ba8a1c1ea491 for pr-154585
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fbamtofastq" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-0-tc1/source/.cargo/config.toml
[INFO] started tweaking git repo https://github.com/10XGenomics/bamtofastq
[INFO] finished tweaking git repo https://github.com/10XGenomics/bamtofastq
[INFO] tweaked toml for git repo https://github.com/10XGenomics/bamtofastq written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/10XGenomics/bamtofastq on toolchain 4cf5f9580233c36f6bc8db76e282ba8a1c1ea491
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4cf5f9580233c36f6bc8db76e282ba8a1c1ea491" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/10XGenomics/bamtofastq already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4cf5f9580233c36f6bc8db76e282ba8a1c1ea491" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded min-max-heap v1.3.0
[INFO] [stderr]   Downloaded lz4 v1.28.1
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded docopt v1.1.1
[INFO] [stderr]   Downloaded cc v1.2.39
[INFO] [stderr]   Downloaded shardio v0.8.2
[INFO] [stderr]   Downloaded rust-htslib v0.50.0
[INFO] [stderr]   Downloaded libdeflate-sys v1.24.0
[INFO] [stderr]   Downloaded bindgen v0.69.5
[INFO] [stderr]   Downloaded lz4-sys v1.11.1+lz4-1.10.0
[INFO] [stderr]   Downloaded libz-sys v1.1.22
[INFO] [stderr]   Downloaded curl-sys v0.4.83+curl-8.15.0
[INFO] [stderr]   Downloaded windows-sys v0.61.1
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded openssl-src v300.5.2+3.5.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+4cf5f9580233c36f6bc8db76e282ba8a1c1ea491" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6b7df164a09dba7fef973137587686d450f9871fcc493f4771544b388ef237e5
[INFO] running `Command { std: "docker" "start" "-a" "6b7df164a09dba7fef973137587686d450f9871fcc493f4771544b388ef237e5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6b7df164a09dba7fef973137587686d450f9871fcc493f4771544b388ef237e5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6b7df164a09dba7fef973137587686d450f9871fcc493f4771544b388ef237e5", kill_on_drop: false }`
[INFO] [stdout] 6b7df164a09dba7fef973137587686d450f9871fcc493f4771544b388ef237e5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+4cf5f9580233c36f6bc8db76e282ba8a1c1ea491" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4abe0abee2f8482c4f1ac19e797dcb5398f49c301fe77d62ff0f2c054f8bcbb8
[INFO] running `Command { std: "docker" "start" "-a" "4abe0abee2f8482c4f1ac19e797dcb5398f49c301fe77d62ff0f2c054f8bcbb8", kill_on_drop: false }`
[INFO] [stderr]    Compiling quote v1.0.41
[INFO] [stderr]     Checking stable_deref_trait v1.2.0
[INFO] [stderr]     Checking memchr v2.7.6
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]     Checking litemap v0.8.0
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]     Checking writeable v0.6.1
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]     Checking cfg-if v1.0.3
[INFO] [stderr]    Compiling libc v0.2.176
[INFO] [stderr]    Compiling regex-syntax v0.8.6
[INFO] [stderr]    Compiling icu_properties_data v2.0.1
[INFO] [stderr]    Compiling icu_normalizer_data v2.0.0
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling object v0.37.3
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]     Checking smallvec v1.15.1
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling bitflags v2.9.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling syn v2.0.106
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking gimli v0.32.3
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]     Checking adler2 v2.0.1
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking utf8_iter v1.0.4
[INFO] [stderr]     Checking rustc-demangle v0.1.26
[INFO] [stderr]    Compiling thiserror v2.0.17
[INFO] [stderr]    Compiling rustix v1.1.2
[INFO] [stderr]    Compiling getrandom v0.3.3
[INFO] [stderr]     Checking percent-encoding v2.3.2
[INFO] [stderr]    Compiling anyhow v1.0.100
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]     Checking form_urlencoded v1.2.2
[INFO] [stderr]     Checking linux-raw-sys v0.11.0
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]    Compiling cc v1.2.39
[INFO] [stderr]    Compiling regex-automata v0.4.11
[INFO] [stderr]     Checking csv-core v0.1.12
[INFO] [stderr]     Checking strsim v0.10.0
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[INFO] [stderr]     Checking itoa v1.0.15
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr]     Checking fastrand v2.3.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking min-max-heap v1.3.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking log v0.4.28
[INFO] [stderr]     Checking once_cell v1.21.3
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling libdeflate-sys v1.24.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling lz4-sys v1.11.1+lz4-1.10.0
[INFO] [stderr]    Compiling libz-sys v1.1.22
[INFO] [stderr]     Checking serde_bytes v0.11.19
[INFO] [stderr]     Checking addr2line v0.25.1
[INFO] [stderr]    Compiling regex v1.11.3
[INFO] [stderr]     Checking tempfile v3.23.0
[INFO] [stderr]     Checking backtrace v0.3.76
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]     Checking flate2 v1.1.2
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.8.0
[INFO] [stderr]    Compiling zerovec-derive v0.11.1
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.17
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]     Checking zerofrom v0.1.6
[INFO] [stderr]     Checking yoke v0.8.0
[INFO] [stderr]     Checking zerovec v0.11.4
[INFO] [stderr]     Checking zerotrie v0.2.2
[INFO] [stderr]     Checking tinystr v0.8.1
[INFO] [stderr]     Checking potential_utf v0.1.3
[INFO] [stderr]     Checking icu_collections v2.0.0
[INFO] [stderr]     Checking icu_locale_core v2.0.0
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking icu_provider v2.0.0
[INFO] [stderr]     Checking icu_properties v2.0.1
[INFO] [stderr]     Checking icu_normalizer v2.0.0
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking csv v1.3.1
[INFO] [stderr]     Checking docopt v1.1.1
[INFO] [stderr]     Checking idna_adapter v1.2.1
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking url v2.5.7
[INFO] [stderr]     Checking lz4 v1.28.1
[INFO] [stderr]     Checking shardio v0.8.2
[INFO] [stderr]     Checking rust-htslib v0.50.0
[INFO] [stderr]     Checking bamtofastq v1.4.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [optimized + debuginfo] target(s) in 18.70s
[INFO] running `Command { std: "docker" "inspect" "4abe0abee2f8482c4f1ac19e797dcb5398f49c301fe77d62ff0f2c054f8bcbb8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4abe0abee2f8482c4f1ac19e797dcb5398f49c301fe77d62ff0f2c054f8bcbb8", kill_on_drop: false }`
[INFO] [stdout] 4abe0abee2f8482c4f1ac19e797dcb5398f49c301fe77d62ff0f2c054f8bcbb8