[INFO] cloning repository https://github.com/biodatageeks/polars-bio [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/biodatageeks/polars-bio" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbiodatageeks%2Fpolars-bio", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbiodatageeks%2Fpolars-bio'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] ae6e8023968529670f99d009556e79902c01d542 [INFO] testing biodatageeks/polars-bio against master#562dee4820c458d823175268e41601d4c060588a for pr-154210 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbiodatageeks%2Fpolars-bio" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-0-tc1/source/.cargo/config.toml [INFO] removed /workspace/builds/worker-0-tc1/source/rust-toolchain.toml [INFO] started tweaking git repo https://github.com/biodatageeks/polars-bio [INFO] finished tweaking git repo https://github.com/biodatageeks/polars-bio [INFO] tweaked toml for git repo https://github.com/biodatageeks/polars-bio written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/biodatageeks/polars-bio on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/biodatageeks/polars-bio already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating git repository `https://github.com/biodatageeks/datafusion-bio-formats.git` [INFO] [stderr] Updating git repository `https://github.com/biodatageeks/datafusion-bio-functions.git` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Updating git repository `https://github.com/biodatageeks/noodles.git` [INFO] [stderr] Updating git repository `https://github.com/biodatageeks/noodles.git` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded datafusion-proto-common v50.3.0 [INFO] [stderr] Downloaded datafusion-physical-expr-adapter v50.3.0 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded coitrees v0.4.0 [INFO] [stderr] Downloaded noodles-bed v0.26.0 [INFO] [stderr] Downloaded noodles-core v0.17.0 [INFO] [stderr] Downloaded datafusion-catalog-listing v50.3.0 [INFO] [stderr] Downloaded datafusion-datasource-avro v50.3.0 [INFO] [stderr] Downloaded noodles-bgzf v0.41.0 [INFO] [stderr] Downloaded noodles-bcf v0.71.0 [INFO] [stderr] Downloaded noodles-bam v0.76.0 [INFO] [stderr] Downloaded noodles-sam v0.72.0 [INFO] [stderr] Downloaded datafusion-datasource v50.3.0 [INFO] [stderr] Downloaded noodles-cram v0.79.0 [INFO] [stderr] Downloaded arrow v56.2.0 [INFO] [stderr] Downloaded datafusion-functions v50.3.0 [INFO] [stderr] Downloaded bio v3.0.0 [INFO] [stderr] Downloaded datafusion-optimizer v50.3.0 [INFO] [stderr] Downloaded datafusion-physical-expr v50.3.0 [INFO] [stderr] Downloaded arrow-array v56.2.0 [INFO] [stderr] Downloaded datafusion v50.3.0 [INFO] [stderr] Downloaded datafusion-sql v50.3.0 [INFO] [stderr] Downloaded arrow-ipc v56.2.0 [INFO] [stderr] Downloaded datafusion-proto v50.3.0 [INFO] [stderr] Downloaded core_extensions v1.5.4 [INFO] [stderr] Downloaded datafusion-functions-aggregate v50.3.0 [INFO] [stderr] Downloaded datafusion-physical-plan v50.3.0 [INFO] [stderr] Downloaded arrow-cast v56.2.0 [INFO] [stderr] Downloaded noodles-vcf v0.74.0 [INFO] [stderr] Downloaded datafusion-ffi v50.3.0 [INFO] [stderr] Downloaded datafusion-functions-nested v50.3.0 [INFO] [stderr] Downloaded datafusion-physical-optimizer v50.3.0 [INFO] [stderr] Downloaded arrow-json v56.2.0 [INFO] [stderr] Downloaded arrow-ord v56.2.0 [INFO] [stderr] Downloaded datafusion-datasource-parquet v50.3.0 [INFO] [stderr] Downloaded datafusion-catalog v50.3.0 [INFO] [stderr] Downloaded datafusion-functions-window v50.3.0 [INFO] [stderr] Downloaded datafusion-macros v50.3.0 [INFO] [stderr] Downloaded datafusion-pruning v50.3.0 [INFO] [stderr] Downloaded datafusion-execution v50.3.0 [INFO] [stderr] Downloaded arrow-arith v56.2.0 [INFO] [stderr] Downloaded arrow-csv v56.2.0 [INFO] [stderr] Downloaded arrow-string v56.2.0 [INFO] [stderr] Downloaded opendal v0.53.3 [INFO] [stderr] Downloaded arrow-buffer v56.2.0 [INFO] [stderr] Downloaded arrow-select v56.2.0 [INFO] [stderr] Downloaded noodles-csi v0.49.0 [INFO] [stderr] Downloaded parquet v56.2.0 [INFO] [stderr] Downloaded noodles-fasta v0.49.0 [INFO] [stderr] Downloaded noodles-core v0.16.0 [INFO] [stderr] Downloaded noodles-csi v0.44.0 [INFO] [stderr] Downloaded noodles v0.93.0 [INFO] [stderr] Downloaded noodles-bgzf v0.36.0 [INFO] [stderr] Downloaded datafusion-functions-table v50.3.0 [INFO] [stderr] Downloaded datafusion-common-runtime v50.3.0 [INFO] [stderr] Downloaded datafusion-session v50.3.0 [INFO] [stderr] Downloaded arrow-schema v56.2.0 [INFO] [stderr] Downloaded datafusion-python v50.1.0 [INFO] [stderr] Downloaded noodles-tabix v0.55.0 [INFO] [stderr] Downloaded noodles-fastq v0.19.0 [INFO] [stderr] Downloaded noodles-fastq v0.17.0 [INFO] [stderr] Downloaded noodles-gff v0.44.0 [INFO] [stderr] Downloaded noodles-tabix v0.50.0 [INFO] [stderr] Downloaded datafusion-datasource-json v50.3.0 [INFO] [stderr] Downloaded arrow-pyarrow v56.2.0 [INFO] [stderr] Downloaded arrow-row v56.2.0 [INFO] [stderr] Downloaded core_extensions_proc_macros v1.5.4 [INFO] [stderr] Downloaded async-ffi v0.5.0 [INFO] [stderr] Downloaded datafusion-datasource-csv v50.3.0 [INFO] [stderr] Downloaded arrow-data v56.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] Error response from daemon: mkdir /var/lib/docker/overlay2/691f263e21c8d7e1c565d2ebd8999950f1d2546d4eafac82389316a423d6018d-init: no space left on device sandbox container could not be created: command failed: exit status: 1 Error response from daemon: mkdir /var/lib/docker/overlay2/691f263e21c8d7e1c565d2ebd8999950f1d2546d4eafac82389316a423d6018d-init: no space left on device Caused by: command failed: exit status: 1 Error response from daemon: mkdir /var/lib/docker/overlay2/691f263e21c8d7e1c565d2ebd8999950f1d2546d4eafac82389316a423d6018d-init: no space left on device