[INFO] fetching crate rsabpoa 0.3.7...
[INFO] testing rsabpoa-0.3.7 against try#dec9417b8611e34e787a3e4c37686b5131f9e5c5 for pr-154210-2
[INFO] extracting crate rsabpoa 0.3.7 into /workspace/builds/worker-6-tc2/source
[INFO] started tweaking crates.io crate rsabpoa 0.3.7
[INFO] finished tweaking crates.io crate rsabpoa 0.3.7
[INFO] tweaked toml for crates.io crate rsabpoa 0.3.7 written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate rsabpoa 0.3.7 on toolchain dec9417b8611e34e787a3e4c37686b5131f9e5c5
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate rsabpoa 0.3.7 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d764eb232e42621e6d2b3147b0da3b23716ca0e76d8effc45921853b3398f4c2
[INFO] running `Command { std: "docker" "start" "-a" "d764eb232e42621e6d2b3147b0da3b23716ca0e76d8effc45921853b3398f4c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d764eb232e42621e6d2b3147b0da3b23716ca0e76d8effc45921853b3398f4c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d764eb232e42621e6d2b3147b0da3b23716ca0e76d8effc45921853b3398f4c2", kill_on_drop: false }`
[INFO] [stdout] d764eb232e42621e6d2b3147b0da3b23716ca0e76d8effc45921853b3398f4c2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5a2da565bbd2f305aafb439380136fc3f9b9dac45866b4855e384f2c7538059c
[INFO] running `Command { std: "docker" "start" "-a" "5a2da565bbd2f305aafb439380136fc3f9b9dac45866b4855e384f2c7538059c", kill_on_drop: false }`
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[INFO] [stdout] warning: type `__off_t` should have an upper camel case name
[INFO] [stdout]   --> src/abpoa_sys.rs:83:10
[INFO] [stdout]    |
[INFO] [stdout] 83 | pub type __off_t = ::std::os::raw::c_long;
[INFO] [stdout]    |          ^^^^^^^ help: convert the identifier to upper camel case: `OffT`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(non_camel_case_types)]` (part of `#[warn(nonstandard_style)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: type `__off64_t` should have an upper camel case name
[INFO] [stdout]   --> src/abpoa_sys.rs:84:10
[INFO] [stdout]    |
[INFO] [stdout] 84 | pub type __off64_t = ::std::os::raw::c_long;
[INFO] [stdout]    |          ^^^^^^^^^ help: convert the identifier to upper camel case: `Off64T`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: type `__m128i` should have an upper camel case name
[INFO] [stdout]   --> src/abpoa_sys.rs:85:10
[INFO] [stdout]    |
[INFO] [stdout] 85 | pub type __m128i = [::std::os::raw::c_longlong; 2usize];
[INFO] [stdout]    |          ^^^^^^^ help: convert the identifier to upper camel case: `M128i`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: type `_IO_lock_t` should have an upper camel case name
[INFO] [stdout]    --> src/abpoa_sys.rs:102:10
[INFO] [stdout]     |
[INFO] [stdout] 102 | pub type _IO_lock_t = ::std::os::raw::c_void;
[INFO] [stdout]     |          ^^^^^^^^^^ help: convert the identifier to upper camel case: `IoLockT`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `abpoa_msa1`
[INFO] [stdout]  --> src/abpoa.rs:7:81
[INFO] [stdout]   |
[INFO] [stdout] 7 |         abpoa_generate_consensus, abpoa_generate_rc_msa, abpoa_init, abpoa_msa, abpoa_msa1,
[INFO] [stdout]   |                                                                                 ^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_read_ptr` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:107:9
[INFO] [stdout]     |
[INFO] [stdout] 107 |     pub _IO_read_ptr: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_ptr`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_read_end` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:108:9
[INFO] [stdout]     |
[INFO] [stdout] 108 |     pub _IO_read_end: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_read_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:109:9
[INFO] [stdout]     |
[INFO] [stdout] 109 |     pub _IO_read_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_write_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:110:9
[INFO] [stdout]     |
[INFO] [stdout] 110 |     pub _IO_write_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_write_ptr` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:111:9
[INFO] [stdout]     |
[INFO] [stdout] 111 |     pub _IO_write_ptr: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_ptr`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_write_end` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:112:9
[INFO] [stdout]     |
[INFO] [stdout] 112 |     pub _IO_write_end: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_buf_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:113:9
[INFO] [stdout]     |
[INFO] [stdout] 113 |     pub _IO_buf_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_buf_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_buf_end` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:114:9
[INFO] [stdout]     |
[INFO] [stdout] 114 |     pub _IO_buf_end: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_buf_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_save_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:115:9
[INFO] [stdout]     |
[INFO] [stdout] 115 |     pub _IO_save_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_save_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_backup_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:116:9
[INFO] [stdout]     |
[INFO] [stdout] 116 |     pub _IO_backup_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_backup_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_save_end` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:117:9
[INFO] [stdout]     |
[INFO] [stdout] 117 |     pub _IO_save_end: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_save_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `abpoa_consensus_dna`, `abpoa_free_para`, and `msa_with_adaptive_fwd_rev`
[INFO] [stdout]   --> src/bin/abpoa_consensus.rs:17:13
[INFO] [stdout]    |
[INFO] [stdout] 17 |     abpoa::{abpoa_consensus_dna, abpoa_consensus_dna_core, msa_with_adaptive_fwd_rev, AbpoaParam},
[INFO] [stdout]    |             ^^^^^^^^^^^^^^^^^^^                            ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 18 |     abpoa_sys::{abpoa_free, abpoa_free_para, abpoa_init, abpoa_para_t, abpoa_t},
[INFO] [stdout]    |                             ^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note:  "cc" "-m64" "/opt/rustwide/target/debug/deps/rustcsXfc4i/symbols.o" "<17 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librsabpoa-454f1baa0f9e93a1,libgskits-137a3ffff68647e1,libnum_cpus-8ea83e35b246fd77,libuuid-656e6fb52643bcb7,libsha1_smol-4fed1055ba2d5f30,libchrono-35e6bcf9bd7f7703,libiana_time_zone-33839373f004bfb1,libindicatif-cef72447070f6861,libportable_atomic-7b9463bd1d714f0f,libnumber_prefix-8479f39d71e80d3e,libconsole-c058baa9e7b0af90,libunicode_width-79cfce0a776a55d3,libonce_cell-5c42cc25c3567235,libbio-d90945fc076ac8ee,libstrum-cd0529b9bac5883b,libcsv-dc0cca32ce6ca551,libryu-0ea4bafc9bef6d8b,libitoa-6b76ec393d6a2c41,libcsv_core-614996297176adca,libbytecount-d552d1ab3fdfccd4,libtriple_accel-5001fad5b3da9792,libeditdistancek-0346ad0312e0678a,libitertools_num-e39b5e90497f1b7c,libenum_map-29caa61405f4f7c1,libstatrs-ef9d10496c1a873c,libnalgebra-5df89e1c9bc6690b,librand_distr-efa822bb77e26d80,libnum_rational-d2cc36329b2abc0f,libtypenum-2d2373cb6e0ea7a0,libsimba-6661710f0162fe0c,libwide-7e0c66d53a19be53,libsafe_arch-c83905e9f99007e9,libbytemuck-ce67f74446d9440a,librand-52bac7d8dc521e29,librand_chacha-2747e6c9bf36219a,libppv_lite86-349b793f77293b66,libzerocopy-836b828081deb599,librand_core-d304561a535ed82a,libgetrandom-0c147b7a521fd7d8,libcfg_if-33ef6c02a07f9fec,libordered_float-171eaf4c0e6f5b1f,libndarray-1ff7b788e5cea018,libmatrixmultiply-7e61cc62d0ead8ac,libnum_complex-648e32346ca02d09,librawpointer-a726d041f28ef5ec,libmultimap-35d7385f5335f2e3,libitertools-bb9dfc9f1c5526ce,libeither-ef22a4c75605e12f,libanyhow-05504bd2b6f9ae25,libnum_integer-f3de6f692493e1a1,libbv-77dd00d08324dbd0,libvec_map-46c209697a19ef82,libserde-d88987281115593b,libbit_set-3f4855eabd5929f5,libbit_vec-d65fb98b7c3788f8,libfxhash-bf471bc75929f9a0,libpetgraph-2830d2e4629487af,libindexmap-3bc210f209fd07ed,libequivalent-7e0e8cbe6c474a67,libhashbrown-19954401a582c725,libfixedbitset-1d9e4d386551ec07,libapprox-1a8da5529d64babf,libnum_traits-4fad70d109d10065,librust_htslib-d235da3fab647469,libthiserror-930ac2bacdb5b578,libieee754-389556e2883b0bde,libhts_sys-41e44ec5d48f4f8f,liblzma_sys-4d1ee967f864b0f6,libcurl_sys-a97767b0a4cddadb,libopenssl_sys-73d632fa3c0290ec,liblibz_sys-09e7cd648679f017,liblibc-e94628ea00bf783b,libbzip2_sys-e44c535060af1614,liburl-e1b287018a94b3e7,libidna-8d57bbefc97d1093,libidna_adapter-5b2f4bdf035b7680,libicu_normalizer-434f7524ff1c3fbc,libicu_normalizer_data-924449c90d89dbe9,libwrite16-e3dc6fad88157cf5,libutf8_iter-0d9be7b316c2b184,libutf16_iter-d3264925eca367d9,libsmallvec-c045c8168691680a,libicu_properties-dde6a3515e95669d,libicu_properties_data-51b5eb2cadc91212,libicu_locid_transform-bd974c6686dca5b6,libicu_locid_transform_data-ad15ccbe3fb30a0f,libicu_collections-e9cdbab23b85efed,libicu_provider-7ef62fd9e4a4c925,libicu_locid-9080a870c60e605a,liblitemap-705c4d2af7d10c57,libtinystr-875f4c7579d58210,libzerovec-dfc779f6133bf0b2,libwriteable-45c783735d88c2b0,libyoke-ac7f3153f3a33834,libzerofrom-e4b29736c69bac9a,libstable_deref_trait-e5f295e98f1b80b2,libform_urlencoded-fc0ba231a3ef0894,libpercent_encoding-8c980134d68585d5,libbio_types-02ce5306b5f80c66,libthiserror-1b35236366822d52,libbyteorder-1efcbe4f07366651,libregex-f62bf83097056255,libregex_automata-e5a04f2a4e38f039,libaho_corasick-bbf1a4f0088c0f15,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,liblinear_map-4e56c30b106c3d59,liblazy_static-b3603208c0de2608,libnewtype_derive-e5f6b8c806ef3d8a,libcustom_derive-7dc5746d463a3d5a,libcrossbeam-864bc17b412fcfd6,libcrossbeam_deque-af5662db3a6ee69c,libcrossbeam_channel-ab5c614752e04b5e,libcrossbeam_queue-524dd9ac9bf4f015,libcrossbeam_epoch-12e0b10032101521,libcrossbeam_utils-0a46ed2e1921bda3,libclap-21c7836d011c34fe,libclap_builder-5a10c1f72c054079,libstrsim-24acdad2526b95b7,libanstream-65bae9f685909c30,libanstyle_query-f0be367a66cb0b02,libis_terminal_polyfill-c14c9d53c4f80a97,libcolorchoice-dfb6701820ae12a0,libanstyle_parse-efd7d30a330dd8dd,libutf8parse-8828ddbb63eb8bad,libclap_lex-8f7e36dc12b04c16,libanstyle-df82d657645c4a5c}.rlib" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lm" "-lz" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/opt/rustwide/target/debug/deps/rustcsXfc4i/raw-dylibs" "-B<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/rsabpoa-780fbd0e989e9e7c/out/abPOA-v1.5.3/lib" "-L" "/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-5b557613ac8e2e70/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-8bbf8debdfff8f50/out/build" "-L" "/opt/rustwide/target/debug/build/libz-sys-a4854c3cab40a43c/out/lib" "-L" "/opt/rustwide/target/debug/build/openssl-sys-342fa2bc720c6006/out/openssl-build/install/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-4bdc462773de0aba/out" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/abpoa_consensus-61b787e9d2c703d5" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: rust-lld: error: duplicate symbol: kvsprintf
[INFO] [stdout]           >>> defined at kstring.c:9 (src/kstring.c:9)
[INFO] [stdout]           >>>            kstring.o:(kvsprintf) in archive /opt/rustwide/target/debug/deps/librsabpoa-454f1baa0f9e93a1.rlib
[INFO] [stdout]           >>> defined at kstring.c:143 (/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out/htslib/kstring.c:143)
[INFO] [stdout]           >>>            d913129f9557e17b-kstring.o:(.text.kvsprintf+0x0) in archive /opt/rustwide/target/debug/deps/libhts_sys-41e44ec5d48f4f8f.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: ksprintf
[INFO] [stdout]           >>> defined at kstring.c:28 (src/kstring.c:28)
[INFO] [stdout]           >>>            kstring.o:(ksprintf) in archive /opt/rustwide/target/debug/deps/librsabpoa-454f1baa0f9e93a1.rlib
[INFO] [stdout]           >>> defined at kstring.c:178 (/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out/htslib/kstring.c:178)
[INFO] [stdout]           >>>            d913129f9557e17b-kstring.o:(.text.ksprintf+0x0) in archive /opt/rustwide/target/debug/deps/libhts_sys-41e44ec5d48f4f8f.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kstrtok
[INFO] [stdout]           >>> defined at kstring.c:38 (src/kstring.c:38)
[INFO] [stdout]           >>>            kstring.o:(kstrtok) in archive /opt/rustwide/target/debug/deps/librsabpoa-454f1baa0f9e93a1.rlib
[INFO] [stdout]           >>> defined at kstring.c:188 (/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out/htslib/kstring.c:188)
[INFO] [stdout]           >>>            d913129f9557e17b-kstring.o:(.text.kstrtok+0x0) in archive /opt/rustwide/target/debug/deps/libhts_sys-41e44ec5d48f4f8f.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: ksplit_core
[INFO] [stdout]           >>> defined at kstring.c:66 (src/kstring.c:66)
[INFO] [stdout]           >>>            kstring.o:(ksplit_core) in archive /opt/rustwide/target/debug/deps/librsabpoa-454f1baa0f9e93a1.rlib
[INFO] [stdout]           >>> defined at kstring.c:225 (/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out/htslib/kstring.c:225)
[INFO] [stdout]           >>>            d913129f9557e17b-kstring.o:(.text.ksplit_core+0x0) in archive /opt/rustwide/target/debug/deps/libhts_sys-41e44ec5d48f4f8f.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kgetline
[INFO] [stdout]           >>> defined at kstring.c:110 (src/kstring.c:110)
[INFO] [stdout]           >>>            kstring.o:(kgetline) in archive /opt/rustwide/target/debug/deps/librsabpoa-454f1baa0f9e93a1.rlib
[INFO] [stdout]           >>> defined at kstring.c:271 (/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out/htslib/kstring.c:271)
[INFO] [stdout]           >>>            d913129f9557e17b-kstring.o:(.text.kgetline+0x0) in archive /opt/rustwide/target/debug/deps/libhts_sys-41e44ec5d48f4f8f.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kmemmem
[INFO] [stdout]           >>> defined at kstring.c:177 (src/kstring.c:177)
[INFO] [stdout]           >>>            kstring.o:(kmemmem) in archive /opt/rustwide/target/debug/deps/librsabpoa-454f1baa0f9e93a1.rlib
[INFO] [stdout]           >>> defined at kstring.c:378 (/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out/htslib/kstring.c:378)
[INFO] [stdout]           >>>            d913129f9557e17b-kstring.o:(.text.kmemmem+0x0) in archive /opt/rustwide/target/debug/deps/libhts_sys-41e44ec5d48f4f8f.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kstrstr
[INFO] [stdout]           >>> defined at kstring.c:198 (src/kstring.c:198)
[INFO] [stdout]           >>>            kstring.o:(kstrstr) in archive /opt/rustwide/target/debug/deps/librsabpoa-454f1baa0f9e93a1.rlib
[INFO] [stdout]           >>> defined at kstring.c:400 (/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out/htslib/kstring.c:400)
[INFO] [stdout]           >>>            d913129f9557e17b-kstring.o:(.text.kstrstr+0x0) in archive /opt/rustwide/target/debug/deps/libhts_sys-41e44ec5d48f4f8f.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kstrnstr
[INFO] [stdout]           >>> defined at kstring.c:203 (src/kstring.c:203)
[INFO] [stdout]           >>>            kstring.o:(kstrnstr) in archive /opt/rustwide/target/debug/deps/librsabpoa-454f1baa0f9e93a1.rlib
[INFO] [stdout]           >>> defined at kstring.c:405 (/opt/rustwide/target/debug/build/hts-sys-b70f6314e46c4a1c/out/htslib/kstring.c:405)
[INFO] [stdout]           >>>            d913129f9557e17b-kstring.o:(.text.kstrnstr+0x0) in archive /opt/rustwide/target/debug/deps/libhts_sys-41e44ec5d48f4f8f.rlib
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `rsabpoa` (bin "abpoa_consensus") due to 1 previous error; 1 warning emitted
[INFO] running `Command { std: "docker" "inspect" "5a2da565bbd2f305aafb439380136fc3f9b9dac45866b4855e384f2c7538059c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5a2da565bbd2f305aafb439380136fc3f9b9dac45866b4855e384f2c7538059c", kill_on_drop: false }`
[INFO] [stdout] 5a2da565bbd2f305aafb439380136fc3f9b9dac45866b4855e384f2c7538059c