[INFO] fetching crate tinyhgvs 0.6.1...
[INFO] testing tinyhgvs-0.6.1 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-2
[INFO] extracting crate tinyhgvs 0.6.1 into /workspace/builds/worker-1-tc1/source
[INFO] started tweaking crates.io crate tinyhgvs 0.6.1
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate tinyhgvs 0.6.1
[INFO] tweaked toml for crates.io crate tinyhgvs 0.6.1 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate tinyhgvs 0.6.1 on toolchain 562dee4820c458d823175268e41601d4c060588a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate tinyhgvs 0.6.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 1a635f304e9730d32eda3e38b278c81e4ad15ad34e4d6189bcc0aea87715f676
[INFO] running `Command { std: "docker" "start" "-a" "1a635f304e9730d32eda3e38b278c81e4ad15ad34e4d6189bcc0aea87715f676", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1a635f304e9730d32eda3e38b278c81e4ad15ad34e4d6189bcc0aea87715f676", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1a635f304e9730d32eda3e38b278c81e4ad15ad34e4d6189bcc0aea87715f676", kill_on_drop: false }`
[INFO] [stdout] 1a635f304e9730d32eda3e38b278c81e4ad15ad34e4d6189bcc0aea87715f676
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8cd5add312b571b5a90c3ee0a6293e0d7c0464da1639ac368b8df19b62f6a994
[INFO] running `Command { std: "docker" "start" "-a" "8cd5add312b571b5a90c3ee0a6293e0d7c0464da1639ac368b8df19b62f6a994", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.7.4
[INFO] [stderr]    Compiling nom v8.0.0
[INFO] [stderr]    Compiling tinyhgvs v0.6.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 6.52s
[INFO] running `Command { std: "docker" "inspect" "8cd5add312b571b5a90c3ee0a6293e0d7c0464da1639ac368b8df19b62f6a994", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8cd5add312b571b5a90c3ee0a6293e0d7c0464da1639ac368b8df19b62f6a994", kill_on_drop: false }`
[INFO] [stdout] 8cd5add312b571b5a90c3ee0a6293e0d7c0464da1639ac368b8df19b62f6a994
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] ffd8caf66265f90e066b07d9c1910d47b9ec5ad4dfeebbb1467bcfed088983b7
[INFO] running `Command { std: "docker" "start" "-a" "ffd8caf66265f90e066b07d9c1910d47b9ec5ad4dfeebbb1467bcfed088983b7", kill_on_drop: false }`
[INFO] [stderr]    Compiling tinyhgvs v0.6.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 2.98s
[INFO] running `Command { std: "docker" "inspect" "ffd8caf66265f90e066b07d9c1910d47b9ec5ad4dfeebbb1467bcfed088983b7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ffd8caf66265f90e066b07d9c1910d47b9ec5ad4dfeebbb1467bcfed088983b7", kill_on_drop: false }`
[INFO] [stdout] ffd8caf66265f90e066b07d9c1910d47b9ec5ad4dfeebbb1467bcfed088983b7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] a257d7b19a88e03dcb93d70e1d08688f59ed707fc2d9a9e0b3d4cf0c7f2d1a2b
[INFO] running `Command { std: "docker" "start" "-a" "a257d7b19a88e03dcb93d70e1d08688f59ed707fc2d9a9e0b3d4cf0c7f2d1a2b", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.04s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/tinyhgvs-63ac9aa65a5aeb4e)
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test parser::tests::parses_nucleotide_position_branches ... ok
[INFO] [stdout] test parser::tests::parses_nucleotide_sequence_items ... ok
[INFO] [stdout] test parser::tests::parses_protein_effect_branches ... ok
[INFO] [stdout] test parser::tests::parses_protein_extension_branches ... ok
[INFO] [stdout] test parser::tests::parses_nucleotide_edit_branches ... ok
[INFO] [stdout] test parser::tests::parses_protein_frameshift_branches ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_diagnostics.rs (/opt/rustwide/target/debug/deps/test_diagnostics-600dcaed178646de)
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test prioritizes_specific_rna_codes_before_generic_ones ... ok
[INFO] [stdout] test displays_machine_code_message_and_version ... ok
[INFO] [stdout] test classifies_supported_diagnostic_codes ... ok
[INFO] [stdout] test falls_back_to_invalid_syntax_for_unclassified_failures ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_parser.rs (/opt/rustwide/target/debug/deps/test_parser-0b2ed4d0bc9d11cf)
[INFO] [stdout] 
[INFO] [stdout] running 23 tests
[INFO] [stdout] test parses_nucleotide_allele_variants ... ok
[INFO] [stdout] test parses_nucleotide_delins_sequence_forms ... ok
[INFO] [stdout] test parses_cdna_offset_anchor_variants ... ok
[INFO] [stdout] test parses_nucleotide_duplication_and_inversion_variants ... ok
[INFO] [stdout] test parses_nucleotide_insertion_sequence_items ... ok
[INFO] [stdout] test parses_nucleotide_substitution_variants ... ok
[INFO] [stdout] test parses_nucleotide_no_change_and_deletion_variants ... ok
[INFO] [stdout] test parses_nucleotide_repeat_variants ... ok
[INFO] [stdout] test parses_protein_allele_variants ... ok
[INFO] [stdout] test parses_protein_deletion_duplication_insertion_and_delins_variants ... ok
[INFO] [stdout] test parses_protein_frameshift_variants ... ok
[INFO] [stdout] test parses_protein_extension_variants ... ok
[INFO] [stdout] test parses_protein_substitution_and_no_change_variants ... ok
[INFO] [stdout] test rejects_examples_deferred_to_future_work ... ok
[INFO] [stdout] test rejects_malformed_cdna_offset_anchor_variants ... ok
[INFO] [stdout] test rejects_malformed_nucleotide_allele_syntax ... ok
[INFO] [stdout] test rejects_malformed_protein_allele_syntax ... ok
[INFO] [stdout] test reports_intronic_and_utr_coordinate_properties_from_parsed_variants ... ok
[INFO] [stdout] test rejects_malformed_protein_extension_variants ... ok
[INFO] [stdout] test trims_input_before_parsing ... ok
[INFO] [stdout] test rejects_malformed_protein_frameshift_variants ... ok
[INFO] [stdout] test reports_nucleotide_allele_helper_views ... ok
[INFO] [stdout] test parses_protein_unknown_and_predicted_effects ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 23 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests tinyhgvs
[INFO] [stdout] 
[INFO] [stdout] running 33 tests
[INFO] [stdout] test src/lib.rs - (line 34) ... ok
[INFO] [stdout] test src/lib.rs - (line 58) ... ok
[INFO] [stdout] test src/model.rs - model::Accession (line 59) ... ok
[INFO] [stdout] test src/lib.rs - (line 92) ... ok
[INFO] [stdout] test src/lib.rs - (line 75) ... ok
[INFO] [stdout] test src/error.rs - error::ParseHgvsError (line 47) ... ok
[INFO] [stdout] test src/model.rs - model::Allele (line 159) ... ok
[INFO] [stdout] test src/error.rs - error::ParseHgvsErrorKind (line 69) ... ok
[INFO] [stdout] test src/model.rs - model::Interval (line 449) ... ok
[INFO] [stdout] test src/model.rs - model::CopiedSequenceItem (line 678) ... ok
[INFO] [stdout] test src/error.rs - error::ParseHgvsError (line 37) ... ok
[INFO] [stdout] test src/model.rs - model::AlleleVariant (line 202) ... ok
[INFO] [stdout] test src/model.rs - model::ProteinCoordinate (line 571) ... ok
[INFO] [stdout] test src/model.rs - model::HgvsVariant (line 10) ... ok
[INFO] [stdout] test src/model.rs - model::NucleotideRepeatBlock (line 648) ... ok
[INFO] [stdout] test src/model.rs - model::AllelePhase (line 135) ... ok
[INFO] [stdout] test src/model.rs - model::NucleotideCoordinate (line 493) ... ok
[INFO] [stdout] test src/model.rs - model::ProteinExtensionTerminal (line 350) ... ok
[INFO] [stdout] test src/model.rs - model::NucleotideVariant (line 266) ... ok
[INFO] [stdout] test src/model.rs - model::ProteinFrameshiftStop (line 412) ... ok
[INFO] [stdout] test src/model.rs - model::ProteinSequence (line 753) ... ok
[INFO] [stdout] test src/model.rs - model::ProteinExtensionEdit (line 379) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 115) ... ok
[INFO] [stdout] test src/model.rs - model::ProteinVariant (line 294) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 131) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 49) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 150) ... ok
[INFO] [stdout] test src/model.rs - model::ReferenceSpec (line 38) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 167) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 187) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 206) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 71) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 88) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 33 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.56s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "a257d7b19a88e03dcb93d70e1d08688f59ed707fc2d9a9e0b3d4cf0c7f2d1a2b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a257d7b19a88e03dcb93d70e1d08688f59ed707fc2d9a9e0b3d4cf0c7f2d1a2b", kill_on_drop: false }`
[INFO] [stdout] a257d7b19a88e03dcb93d70e1d08688f59ed707fc2d9a9e0b3d4cf0c7f2d1a2b