[INFO] fetching crate rust-htslib 1.0.0... [INFO] testing rust-htslib-1.0.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-2 [INFO] extracting crate rust-htslib 1.0.0 into /workspace/builds/worker-0-tc1/source [INFO] started tweaking crates.io crate rust-htslib 1.0.0 [INFO] finished tweaking crates.io crate rust-htslib 1.0.0 [INFO] tweaked toml for crates.io crate rust-htslib 1.0.0 written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate rust-htslib 1.0.0 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate rust-htslib 1.0.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded derive-new v0.7.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded libdeflate-sys v1.25.0 [INFO] [stderr] Downloaded libz-sys v1.1.23 [INFO] [stderr] Downloaded curl-sys v0.4.85+curl-8.18.0 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] [stderr] Downloaded openssl-src v300.5.5+3.5.5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e8bbe6e4a259a26940eb7e7064543553516cad250505bbe5b127878d984f6d5c [INFO] running `Command { std: "docker" "start" "-a" "e8bbe6e4a259a26940eb7e7064543553516cad250505bbe5b127878d984f6d5c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e8bbe6e4a259a26940eb7e7064543553516cad250505bbe5b127878d984f6d5c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e8bbe6e4a259a26940eb7e7064543553516cad250505bbe5b127878d984f6d5c", kill_on_drop: false }` [INFO] [stdout] e8bbe6e4a259a26940eb7e7064543553516cad250505bbe5b127878d984f6d5c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f5516751252fa2ce19208ef812f6314ce0afe6707076202f5b7b5657c4d0b6ec [INFO] running `Command { std: "docker" "start" "-a" "f5516751252fa2ce19208ef812f6314ce0afe6707076202f5b7b5657c4d0b6ec", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.106 [INFO] [stderr] Compiling find-msvc-tools v0.1.8 [INFO] [stderr] Compiling glob v0.3.3 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling cfg-if v1.0.4 [INFO] [stderr] Compiling aho-corasick v1.1.4 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling bitflags v2.10.0 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling percent-encoding v2.3.2 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling libloading v0.8.9 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling form_urlencoded v1.2.2 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling cc v1.2.54 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v1.0.44 [INFO] [stderr] Compiling syn v2.0.114 [INFO] [stderr] Compiling regex-automata v0.4.13 [INFO] [stderr] Compiling openssl-src v300.5.5+3.5.5 [INFO] [stderr] Compiling cmake v0.1.57 [INFO] [stderr] Compiling openssl-sys v0.9.111 [INFO] [stderr] Compiling libz-sys v1.1.23 [INFO] [stderr] Compiling curl-sys v0.4.85+curl-8.18.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling regex v1.12.2 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.8.1 [INFO] [stderr] Compiling zerovec-derive v0.11.2 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling yoke v0.8.1 [INFO] [stderr] Compiling zerovec v0.11.5 [INFO] [stderr] Compiling zerotrie v0.2.3 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling tinystr v0.8.2 [INFO] [stderr] Compiling potential_utf v0.1.4 [INFO] [stderr] Compiling icu_collections v2.1.1 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling icu_locale_core v2.1.1 [INFO] [stderr] Compiling icu_provider v2.1.1 [INFO] [stderr] Compiling icu_normalizer v2.1.1 [INFO] [stderr] Compiling icu_properties v2.1.2 [INFO] [stderr] Compiling idna_adapter v1.2.1 [INFO] [stderr] Compiling idna v1.1.0 [INFO] [stderr] Compiling url v2.5.8 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling rust-htslib v1.0.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 47s [INFO] running `Command { std: "docker" "inspect" "f5516751252fa2ce19208ef812f6314ce0afe6707076202f5b7b5657c4d0b6ec", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f5516751252fa2ce19208ef812f6314ce0afe6707076202f5b7b5657c4d0b6ec", kill_on_drop: false }` [INFO] [stdout] f5516751252fa2ce19208ef812f6314ce0afe6707076202f5b7b5657c4d0b6ec [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 988d39aadb86b6729afe06eeb4fb24541b8d99632214998f255e8156c21b729d [INFO] running `Command { std: "docker" "start" "-a" "988d39aadb86b6729afe06eeb4fb24541b8d99632214998f255e8156c21b729d", kill_on_drop: false }` [INFO] [stderr] Compiling libloading v0.8.9 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling zmij v1.0.17 [INFO] [stderr] Compiling rustix v1.1.3 [INFO] [stderr] Compiling getrandom v0.3.4 [INFO] [stderr] Compiling once_cell v1.21.3 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling tempfile v3.24.0 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling rust-htslib v1.0.0 (/opt/rustwide/workdir) [INFO] [stdout] error: couldn't read `src/bgzf/../../test/bgzip/plain.vcf`: No such file or directory (os error 2) [INFO] [stdout] --> src/bgzf/mod.rs:303:27 [INFO] [stdout] | [INFO] [stdout] 303 | const CONTENT: &str = include_str!("../../test/bgzip/plain.vcf"); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `rust-htslib` (lib test) due to 1 previous error [INFO] running `Command { std: "docker" "inspect" "988d39aadb86b6729afe06eeb4fb24541b8d99632214998f255e8156c21b729d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "988d39aadb86b6729afe06eeb4fb24541b8d99632214998f255e8156c21b729d", kill_on_drop: false }` [INFO] [stdout] 988d39aadb86b6729afe06eeb4fb24541b8d99632214998f255e8156c21b729d