[INFO] fetching crate rust-featurecounts 0.1.0... [INFO] testing rust-featurecounts-0.1.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-2 [INFO] extracting crate rust-featurecounts 0.1.0 into /workspace/builds/worker-3-tc1/source [INFO] started tweaking crates.io crate rust-featurecounts 0.1.0 [INFO] finished tweaking crates.io crate rust-featurecounts 0.1.0 [INFO] tweaked toml for crates.io crate rust-featurecounts 0.1.0 written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate rust-featurecounts 0.1.0 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate rust-featurecounts 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles v0.86.0 [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] [stderr] Downloaded lexical-core v1.0.6 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded vec_map v0.8.2 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded feature-probe v0.1.1 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded fxhash v0.2.1 [INFO] [stderr] Downloaded rawpointer v0.2.1 [INFO] [stderr] Downloaded noodles-csi v0.41.0 [INFO] [stderr] Downloaded bytecount v0.6.9 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded fixedbitset v0.5.7 [INFO] [stderr] Downloaded enum-map-derive v0.17.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded num-rational v0.4.2 [INFO] [stderr] Downloaded noodles-sam v0.67.0 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded noodles-bgzf v0.34.0 [INFO] [stderr] Downloaded bv v0.11.1 [INFO] [stderr] Downloaded enum-map v2.7.3 [INFO] [stderr] Downloaded lexical-write-integer v1.0.6 [INFO] [stderr] Downloaded simba v0.9.1 [INFO] [stderr] Downloaded lexical-parse-integer v1.0.6 [INFO] [stderr] Downloaded matrixmultiply v0.3.10 [INFO] [stderr] Downloaded rand_distr v0.4.3 [INFO] [stderr] Downloaded multimap v0.10.1 [INFO] [stderr] Downloaded ordered-float v5.1.0 [INFO] [stderr] Downloaded noodles-bam v0.71.0 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded num-bigint v0.4.6 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded wide v0.7.33 [INFO] [stderr] Downloaded lexical-parse-float v1.0.6 [INFO] [stderr] Downloaded portable-atomic v1.13.0 [INFO] [stderr] Downloaded bio v2.3.0 [INFO] [stderr] Downloaded ndarray v0.16.1 [INFO] [stderr] Downloaded nalgebra v0.33.2 [INFO] [stderr] Downloaded petgraph v0.8.3 [INFO] [stderr] Downloaded libc v0.2.179 [INFO] [stderr] Downloaded lexical-util v1.0.7 [INFO] [stderr] Downloaded lexical-write-float v1.0.6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] d3bec77227b7ac213c56f6e5fda5f74ed178f1a16632f191c29a997dbcda891a [INFO] running `Command { std: "docker" "start" "-a" "d3bec77227b7ac213c56f6e5fda5f74ed178f1a16632f191c29a997dbcda891a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d3bec77227b7ac213c56f6e5fda5f74ed178f1a16632f191c29a997dbcda891a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d3bec77227b7ac213c56f6e5fda5f74ed178f1a16632f191c29a997dbcda891a", kill_on_drop: false }` [INFO] [stdout] d3bec77227b7ac213c56f6e5fda5f74ed178f1a16632f191c29a997dbcda891a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e54221ce5bc3b7f10a4b38875f49df91b820896d270bfc48dfcce25442e1ce8c [INFO] running `Command { std: "docker" "start" "-a" "e54221ce5bc3b7f10a4b38875f49df91b820896d270bfc48dfcce25442e1ce8c", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.104 [INFO] [stderr] Compiling libm v0.2.15 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling libc v0.2.179 [INFO] [stderr] Compiling lexical-util v1.0.7 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling bytemuck v1.24.0 [INFO] [stderr] Compiling lexical-write-integer v1.0.6 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling lexical-parse-integer v1.0.6 [INFO] [stderr] Compiling crossbeam-channel v0.5.15 [INFO] [stderr] Compiling bstr v1.12.1 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling quote v1.0.42 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling syn v2.0.112 [INFO] [stderr] Compiling noodles-core v0.15.0 [INFO] [stderr] Compiling noodles-bgzf v0.34.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling lexical-parse-float v1.0.6 [INFO] [stderr] Compiling getrandom v0.2.16 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling lexical-write-float v1.0.6 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling lexical-core v1.0.6 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling noodles-csi v0.41.0 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling bitflags v2.10.0 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling foldhash v0.1.5 [INFO] [stderr] Compiling thiserror v2.0.17 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Compiling anyhow v1.0.100 [INFO] [stderr] Compiling simba v0.9.1 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling noodles-sam v0.67.0 [INFO] [stderr] Compiling hashbrown v0.15.5 [INFO] [stderr] Compiling crossbeam-deque v0.8.6 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling itoa v1.0.17 [INFO] [stderr] Compiling ryu v1.0.22 [INFO] [stderr] Compiling fixedbitset v0.5.7 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling petgraph v0.8.3 [INFO] [stderr] Compiling ndarray v0.16.1 [INFO] [stderr] Compiling ordered-float v5.1.0 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling thiserror-impl v2.0.17 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling noodles-bam v0.71.0 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling strum v0.26.3 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling rayon v1.11.0 [INFO] [stderr] Compiling rustc-hash v2.1.1 [INFO] [stderr] Compiling smallvec v1.15.1 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling noodles v0.86.0 [INFO] [stderr] Compiling nalgebra v0.33.2 [INFO] [stderr] Compiling multimap v0.10.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling statrs v0.18.0 [INFO] [stderr] Compiling bio v2.3.0 [INFO] [stderr] Compiling rust-featurecounts v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 19s [INFO] running `Command { std: "docker" "inspect" "e54221ce5bc3b7f10a4b38875f49df91b820896d270bfc48dfcce25442e1ce8c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e54221ce5bc3b7f10a4b38875f49df91b820896d270bfc48dfcce25442e1ce8c", kill_on_drop: false }` [INFO] [stdout] e54221ce5bc3b7f10a4b38875f49df91b820896d270bfc48dfcce25442e1ce8c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b79e698fa60c03a148ccf59a89af97c6032a851172acb09a4a0a5b4908bd2e4f [INFO] running `Command { std: "docker" "start" "-a" "b79e698fa60c03a148ccf59a89af97c6032a851172acb09a4a0a5b4908bd2e4f", kill_on_drop: false }` [INFO] [stderr] Compiling rust-featurecounts v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.68s [INFO] running `Command { std: "docker" "inspect" "b79e698fa60c03a148ccf59a89af97c6032a851172acb09a4a0a5b4908bd2e4f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b79e698fa60c03a148ccf59a89af97c6032a851172acb09a4a0a5b4908bd2e4f", kill_on_drop: false }` [INFO] [stdout] b79e698fa60c03a148ccf59a89af97c6032a851172acb09a4a0a5b4908bd2e4f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 22b145a8c1a9a51652de70b4895f4b7bc934c0b09f0dc408e1a826bfae562c3a [INFO] running `Command { std: "docker" "start" "-a" "22b145a8c1a9a51652de70b4895f4b7bc934c0b09f0dc408e1a826bfae562c3a", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.25s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/rust_featurecounts-6d90797f8751c957) [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test gff::tests::test_parse_gff3_attributes ... ok [INFO] [stdout] test gff::tests::test_parse_gtf_attributes ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "22b145a8c1a9a51652de70b4895f4b7bc934c0b09f0dc408e1a826bfae562c3a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "22b145a8c1a9a51652de70b4895f4b7bc934c0b09f0dc408e1a826bfae562c3a", kill_on_drop: false }` [INFO] [stdout] 22b145a8c1a9a51652de70b4895f4b7bc934c0b09f0dc408e1a826bfae562c3a