[INFO] fetching crate oxbow 0.7.0... [INFO] testing oxbow-0.7.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-2 [INFO] extracting crate oxbow 0.7.0 into /workspace/builds/worker-6-tc1/source [INFO] started tweaking crates.io crate oxbow 0.7.0 [INFO] finished tweaking crates.io crate oxbow 0.7.0 [INFO] tweaked toml for crates.io crate oxbow 0.7.0 written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate oxbow 0.7.0 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate oxbow 0.7.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-gtf v0.50.0 [INFO] [stderr] Downloaded noodles-csi v0.54.0 [INFO] [stderr] Downloaded byteordered v0.6.0 [INFO] [stderr] Downloaded arrow-csv v58.0.0 [INFO] [stderr] Downloaded zlib-rs v0.5.3 [INFO] [stderr] Downloaded arrow-json v58.0.0 [INFO] [stderr] Downloaded noodles-bam v0.86.0 [INFO] [stderr] Downloaded arrow-ipc v58.0.0 [INFO] [stderr] Downloaded libdeflate-sys v0.13.0 [INFO] [stderr] Downloaded noodles-vcf v0.85.0 [INFO] [stderr] Downloaded noodles-sam v0.82.0 [INFO] [stderr] Downloaded webpki v0.22.4 [INFO] [stderr] Downloaded attohttpc v0.25.0 [INFO] [stderr] Downloaded noodles-bed v0.32.0 [INFO] [stderr] Downloaded noodles-fastq v0.22.0 [INFO] [stderr] Downloaded libz-rs-sys v0.5.3 [INFO] [stderr] Downloaded libdeflater v0.13.0 [INFO] [stderr] Downloaded noodles-tabix v0.60.0 [INFO] [stderr] Downloaded bigtools v0.5.6 [INFO] [stderr] Downloaded noodles-gff v0.55.0 [INFO] [stderr] Downloaded noodles v0.107.0 [INFO] [stderr] Downloaded noodles-cram v0.90.0 [INFO] [stderr] Downloaded noodles-bcf v0.83.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 49f14fbc403cba64c3e0485a6644b4b9c44ff6ef0efdefff800a0d8ad084f292 [INFO] running `Command { std: "docker" "start" "-a" "49f14fbc403cba64c3e0485a6644b4b9c44ff6ef0efdefff800a0d8ad084f292", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "49f14fbc403cba64c3e0485a6644b4b9c44ff6ef0efdefff800a0d8ad084f292", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "49f14fbc403cba64c3e0485a6644b4b9c44ff6ef0efdefff800a0d8ad084f292", kill_on_drop: false }` [INFO] [stdout] 49f14fbc403cba64c3e0485a6644b4b9c44ff6ef0efdefff800a0d8ad084f292 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fb48245de216febd9009e7449067290f43bb22cbef5523cb74cf33acbe16dfee [INFO] running `Command { std: "docker" "start" "-a" "fb48245de216febd9009e7449067290f43bb22cbef5523cb74cf33acbe16dfee", kill_on_drop: false }` [INFO] [stderr] Compiling zerocopy v0.8.31 [INFO] [stderr] Compiling lexical-util v1.0.7 [INFO] [stderr] Compiling zlib-rs v0.5.3 [INFO] [stderr] Compiling bstr v1.12.1 [INFO] [stderr] Compiling cc v1.2.48 [INFO] [stderr] Compiling indexmap v2.12.1 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling arrow-schema v58.0.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling getrandom v0.3.4 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling zerocopy-derive v0.8.31 [INFO] [stderr] Compiling zerovec-derive v0.11.2 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling getrandom v0.2.16 [INFO] [stderr] Compiling smallvec v1.15.1 [INFO] [stderr] Compiling futures-sink v0.3.31 [INFO] [stderr] Compiling flatbuffers v25.9.23 [INFO] [stderr] Compiling futures-macro v0.3.31 [INFO] [stderr] Compiling futures-channel v0.3.31 [INFO] [stderr] Compiling serde_json v1.0.145 [INFO] [stderr] Compiling lexical-parse-integer v1.0.6 [INFO] [stderr] Compiling lexical-write-integer v1.0.6 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling num_cpus v1.17.0 [INFO] [stderr] Compiling lexical-parse-float v1.0.6 [INFO] [stderr] Compiling noodles-core v0.19.0 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling lexical-write-float v1.0.6 [INFO] [stderr] Compiling libbz2-rs-sys v0.2.2 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.8.1 [INFO] [stderr] Compiling rustix v1.1.2 [INFO] [stderr] Compiling http v0.2.12 [INFO] [stderr] Compiling clap_derive v4.5.49 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling lexical-core v1.0.6 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling chrono v0.4.42 [INFO] [stderr] Compiling atoi v2.0.0 [INFO] [stderr] Compiling ring v0.17.14 [INFO] [stderr] Compiling num-bigint v0.4.6 [INFO] [stderr] Compiling libdeflate-sys v0.13.0 [INFO] [stderr] Compiling futures-util v0.3.31 [INFO] [stderr] Compiling bzip2 v0.6.1 [INFO] [stderr] Compiling lzma-rust2 v0.16.2 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling md-5 v0.10.6 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling yoke v0.8.1 [INFO] [stderr] Compiling simdutf8 v0.1.5 [INFO] [stderr] Compiling byteordered v0.6.0 [INFO] [stderr] Compiling zerovec v0.11.5 [INFO] [stderr] Compiling zerotrie v0.2.3 [INFO] [stderr] Compiling noodles-fastq v0.22.0 [INFO] [stderr] Compiling tokio v1.48.0 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling tinystr v0.8.2 [INFO] [stderr] Compiling icu_locale_core v2.1.1 [INFO] [stderr] Compiling potential_utf v0.1.4 [INFO] [stderr] Compiling clap v4.5.53 [INFO] [stderr] Compiling icu_collections v2.1.1 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling index_list v0.2.17 [INFO] [stderr] Compiling tempfile v3.23.0 [INFO] [stderr] Compiling icu_provider v2.1.1 [INFO] [stderr] Compiling libz-rs-sys v0.5.3 [INFO] [stderr] Compiling half v2.7.1 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling icu_properties v2.1.1 [INFO] [stderr] Compiling icu_normalizer v2.1.1 [INFO] [stderr] Compiling flate2 v1.1.5 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling libdeflater v0.13.0 [INFO] [stderr] Compiling noodles-bgzf v0.46.0 [INFO] [stderr] Compiling ufmt-macros v0.3.0 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling arrow-buffer v58.0.0 [INFO] [stderr] Compiling noodles-csi v0.54.0 [INFO] [stderr] Compiling noodles-fasta v0.60.0 [INFO] [stderr] Compiling rustls v0.21.12 [INFO] [stderr] Compiling futures-executor v0.3.31 [INFO] [stderr] Compiling ufmt v0.2.0 [INFO] [stderr] Compiling futures v0.3.31 [INFO] [stderr] Compiling noodles-tabix v0.60.0 [INFO] [stderr] Compiling noodles-sam v0.82.0 [INFO] [stderr] Compiling noodles-gff v0.55.0 [INFO] [stderr] Compiling noodles-vcf v0.85.0 [INFO] [stderr] Compiling noodles-bed v0.32.0 [INFO] [stderr] Compiling idna_adapter v1.2.1 [INFO] [stderr] Compiling idna v1.1.0 [INFO] [stderr] Compiling arrow-data v58.0.0 [INFO] [stderr] Compiling noodles-gtf v0.50.0 [INFO] [stderr] Compiling url v2.5.7 [INFO] [stderr] Compiling rustls-webpki v0.101.7 [INFO] [stderr] Compiling sct v0.7.1 [INFO] [stderr] Compiling webpki v0.22.4 [INFO] [stderr] Compiling arrow-array v58.0.0 [INFO] [stderr] Compiling noodles-bam v0.86.0 [INFO] [stderr] Compiling noodles-bcf v0.83.0 [INFO] [stderr] Compiling noodles-cram v0.90.0 [INFO] [stderr] Compiling attohttpc v0.25.0 [INFO] [stderr] Compiling arrow-select v58.0.0 [INFO] [stderr] Compiling arrow-arith v58.0.0 [INFO] [stderr] Compiling arrow-row v58.0.0 [INFO] [stderr] Compiling bigtools v0.5.6 [INFO] [stderr] Compiling noodles v0.107.0 [INFO] [stderr] Compiling arrow-ord v58.0.0 [INFO] [stderr] Compiling arrow-string v58.0.0 [INFO] [stderr] Compiling arrow-ipc v58.0.0 [INFO] [stderr] Compiling arrow-cast v58.0.0 [INFO] [stderr] Compiling arrow-csv v58.0.0 [INFO] [stderr] Compiling arrow-json v58.0.0 [INFO] [stderr] Compiling arrow v58.0.0 [INFO] [stderr] Compiling oxbow v0.7.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 30s [INFO] running `Command { std: "docker" "inspect" "fb48245de216febd9009e7449067290f43bb22cbef5523cb74cf33acbe16dfee", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fb48245de216febd9009e7449067290f43bb22cbef5523cb74cf33acbe16dfee", kill_on_drop: false }` [INFO] [stdout] fb48245de216febd9009e7449067290f43bb22cbef5523cb74cf33acbe16dfee [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a138f8403f8fa6400e677e82b73538290c601b206d5baa5ac6c4a4ab455d0a0c [INFO] running `Command { std: "docker" "start" "-a" "a138f8403f8fa6400e677e82b73538290c601b206d5baa5ac6c4a4ab455d0a0c", kill_on_drop: false }` [INFO] [stderr] Compiling oxbow v0.7.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 9.97s [INFO] running `Command { std: "docker" "inspect" "a138f8403f8fa6400e677e82b73538290c601b206d5baa5ac6c4a4ab455d0a0c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a138f8403f8fa6400e677e82b73538290c601b206d5baa5ac6c4a4ab455d0a0c", kill_on_drop: false }` [INFO] [stdout] a138f8403f8fa6400e677e82b73538290c601b206d5baa5ac6c4a4ab455d0a0c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 3862bf959286c26c7d745e0000937166353592f42614f54de012a2e2bd532c4f [INFO] running `Command { std: "docker" "start" "-a" "3862bf959286c26c7d745e0000937166353592f42614f54de012a2e2bd532c4f", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.37s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/oxbow-19a802bd08917938) [INFO] [stdout] [INFO] [stdout] running 191 tests [INFO] [stdout] test alignment::model::batch::tests::test_from_model ... ok [INFO] [stdout] test alignment::model::batch::tests::test_finish_no_tags ... ok [INFO] [stdout] test alignment::model::batch::tests::test_batch_builder_new ... ok [INFO] [stdout] test alignment::model::batch::tests::test_push_sam_record ... ok [INFO] [stdout] test alignment::model::batch::tests::test_schema ... ok [INFO] [stdout] test alignment::model::field::tests::test_field_builder_with_refs ... ok [INFO] [stdout] test alignment::model::field::tests::test_field_from_str ... ok [INFO] [stdout] test alignment::model::tag::tests::test_tagdef_into_bytes ... ok [INFO] [stdout] test alignment::model::batch::tests::test_finish_empty_tags ... ok [INFO] [stdout] test alignment::model::tests::test_clone_eq ... ok [INFO] [stdout] test alignment::model::tag::tests::test_tagbuilder_append_null ... ok [INFO] [stdout] test alignment::model::tests::test_custom_fields_no_tags ... ok [INFO] [stdout] test alignment::model::batch::tests::test_no_tags_when_tag_defs_none ... ok [INFO] [stdout] test alignment::model::tag::tests::test_tagdef_try_from_invalid ... ok [INFO] [stdout] test alignment::model::tag::tests::test_tagbuilder_append_value ... ok [INFO] [stdout] test alignment::model::tests::test_from_str_defaults ... ok [INFO] [stdout] test alignment::model::tag::tests::test_tagdef_try_from_valid ... ok [INFO] [stdout] test alignment::model::tag::tests::test_tag_arrow_type ... ok [INFO] [stdout] test alignment::model::tests::test_from_str_roundtrip ... ok [INFO] [stdout] test alignment::model::field::tests::test_field_builder_push ... ok [INFO] [stdout] test alignment::model::batch::tests::test_push_bam_record ... ok [INFO] [stdout] test alignment::model::tests::test_from_str_roundtrip_empty_tags ... ok [INFO] [stdout] test alignment::model::field::tests::test_field_arrow_type ... ok [INFO] [stdout] test alignment::model::tests::test_from_str_roundtrip_defaults ... ok [INFO] [stdout] test alignment::model::tests::test_display_custom_with_tags ... ok [INFO] [stdout] test alignment::model::tests::test_display_defaults ... ok [INFO] [stdout] test alignment::model::tests::test_display_tags_no_defs ... ok [INFO] [stdout] test alignment::model::tests::test_fields_with_tags ... ok [INFO] [stdout] test alignment::model::tests::test_default_model ... ok [INFO] [stdout] test alignment::model::tests::test_invalid_field ... ok [INFO] [stdout] test alignment::model::tests::test_invalid_tag_name ... ok [INFO] [stdout] test alignment::model::tests::test_invalid_tag_type ... ok [INFO] [stdout] test alignment::model::tests::test_no_tags_when_tag_defs_none ... ok [INFO] [stdout] test alignment::model::tests::test_project_unknown_column ... ok [INFO] [stdout] test alignment::model::tests::test_project_with_tags ... ok [INFO] [stdout] test alignment::model::tests::test_schema_independence ... ok [INFO] [stdout] test alignment::model::tests::test_project ... ok [INFO] [stdout] test alignment::model::tests::test_default_fields_constructor ... ok [INFO] [stdout] test bbi::model::base::batch::tests::test_bigbed_bed6_projected ... ok [INFO] [stdout] test bbi::model::base::batch::tests::test_bigbed_bed6_no_custom ... ok [INFO] [stdout] test alignment::model::tests::test_tags_empty_defs_is_empty_struct ... ok [INFO] [stdout] test bbi::model::base::batch::tests::test_finish_empty_batch ... ok [INFO] [stdout] test bbi::model::base::field::tests::test_fielddef_try_from_autosql_field ... ok [INFO] [stdout] test bbi::model::base::batch::tests::test_batch_builder_new ... ok [INFO] [stdout] test bbi::model::base::tests::test_bed6_model ... ok [INFO] [stdout] test bbi::model::base::tests::test_custom_fields ... ok [INFO] [stdout] test bbi::model::base::batch::tests::test_schema ... ok [INFO] [stdout] test bbi::model::base::tests::test_bed6_projection ... ok [INFO] [stdout] test bbi::model::zoom::batch::tests::test_finish ... ok [INFO] [stdout] test bbi::model::base::batch::tests::test_push_bigbed_record ... ok [INFO] [stdout] test bbi::model::base::tests::test_project_noncontiguous_custom ... ok [INFO] [stdout] test bbi::model::base::tests::test_bedgraph_model ... ok [INFO] [stdout] test bbi::model::zoom::batch::tests::test_schema ... ok [INFO] [stdout] test bbi::model::zoom::field::tests::test_field_from_str ... ok [INFO] [stdout] test bbi::model::zoom::field::tests::test_field_arrow_type ... ok [INFO] [stdout] test bbi::model::zoom::tests::test_custom ... ok [INFO] [stdout] test bbi::model::zoom::tests::test_defaults ... ok [INFO] [stdout] test bbi::model::zoom::batch::tests::test_batch_builder_new ... ok [INFO] [stdout] test bbi::model::base::batch::tests::test_push_bigwig_record ... ok [INFO] [stdout] test bbi::model::zoom::batch::tests::test_push_zoom_records ... ok [INFO] [stdout] test bbi::model::zoom::tests::test_project ... ok [INFO] [stdout] test bed::model::batch::tests::test_batch_builder_new ... ok [INFO] [stdout] test bed::model::batch::tests::test_finish_bedn_plus ... ok [INFO] [stdout] test bed::model::batch::tests::test_finish_bedn_plus_m ... ok [INFO] [stdout] test bed::model::batch::tests::test_finish_bedn ... ok [INFO] [stdout] test bed::model::field::tests::test_field_arrow_type ... ok [INFO] [stdout] test bed::model::field_def::tests::test_bed_standard_fields ... ok [INFO] [stdout] test bed::model::schema::tests::test_bed_schema_bedgraph ... ok [INFO] [stdout] test bed::model::field_def::tests::test_fielddef_new ... ok [INFO] [stdout] test bed::model::field_def::tests::test_field_arrow_type ... ok [INFO] [stdout] test bed::model::batch::tests::test_push_bed_record ... ok [INFO] [stdout] test bed::model::field_def::tests::test_fielddef_try_from_tuple ... ok [INFO] [stdout] test bed::model::field::tests::test_field_builder_push ... ok [INFO] [stdout] test bed::model::schema::tests::test_bed_schema_bedn ... ok [INFO] [stdout] test bed::model::schema::tests::test_bed_schema_bedn_plus_zero ... ok [INFO] [stdout] test bed::model::field::tests::test_field_from_str ... ok [INFO] [stdout] test bed::model::schema::tests::test_bed_schema_display ... ok [INFO] [stdout] test bed::model::tests::test_bed3_projected_subset ... ok [INFO] [stdout] test bed::model::tests::test_bed12_with_custom_mixed_projection ... ok [INFO] [stdout] test bed::model::tests::test_bed6_all_fields ... ok [INFO] [stdout] test bed::model::tests::test_bed3_plus ... ok [INFO] [stdout] test bed::model::tests::test_bedgraph ... ok [INFO] [stdout] test bed::model::tests::test_custom_schema ... ok [INFO] [stdout] test bed::model::tests::test_bedgraph_arrow_types ... ok [INFO] [stdout] test bed::model::tests::test_project ... ok [INFO] [stdout] test gxf::model::attribute::tests::test_attribute_arrow_type ... ok [INFO] [stdout] test gxf::model::attribute::tests::test_attribute_builder_append_null ... ok [INFO] [stdout] test bed::model::schema::tests::test_bed_schema_bedn_plus ... ok [INFO] [stdout] test gxf::model::attribute::tests::test_attribute_def_try_from_valid ... ok [INFO] [stdout] test gxf::model::attribute::tests::test_attribute_builder_append_value_string ... ok [INFO] [stdout] test gxf::model::attribute::tests::test_attribute_builder_append_value_array ... ok [INFO] [stdout] test bed::model::tests::test_bed6_projected ... ok [INFO] [stdout] test bed::model::schema::tests::test_bed_schema_bedn_plus_m ... ok [INFO] [stdout] test gxf::model::batch::tests::test_batch_builder_new ... ok [INFO] [stdout] test gxf::model::field::tests::test_field_arrow_type ... ok [INFO] [stdout] test gxf::model::batch::tests::test_finish ... ok [INFO] [stdout] test gxf::model::batch::tests::test_push_gff_record ... ok [INFO] [stdout] test gxf::model::batch::tests::test_push_gtf_record ... ok [INFO] [stdout] test gxf::model::batch::tests::test_schema ... ok [INFO] [stdout] test gxf::model::tests::test_custom_fields_no_attrs ... ok [INFO] [stdout] test gxf::model::field::tests::test_field_from_str ... ok [INFO] [stdout] test gxf::model::tests::test_attr_defs_to_tuple ... ok [INFO] [stdout] test gxf::model::tests::test_attrs_empty_defs_is_empty_struct ... ok [INFO] [stdout] test bed::model::tests::test_bed9_noncontiguous_projection ... ok [INFO] [stdout] test gxf::model::tests::test_default_model ... ok [INFO] [stdout] test gxf::model::field::tests::test_field_builder_push_gxf ... ok [INFO] [stdout] test gxf::model::tests::test_default_fields_constructor ... ok [INFO] [stdout] test gxf::model::tests::test_no_attrs_when_attr_defs_none ... ok [INFO] [stdout] test gxf::model::tests::test_project ... ok [INFO] [stdout] test gxf::model::tests::test_fields_with_attrs ... ok [INFO] [stdout] test gxf::model::tests::test_project_with_attrs ... ok [INFO] [stdout] test sequence::model::batch::tests::test_new_fasta_with_default_fields ... ok [INFO] [stdout] test sequence::model::batch::tests::test_new_fastq_with_default_fields ... ok [INFO] [stdout] test sequence::model::batch::tests::test_finish_empty_batch ... ok [INFO] [stdout] test sequence::model::batch::tests::test_push_fasta_record ... ok [INFO] [stdout] test sequence::model::batch::tests::test_schema ... ok [INFO] [stdout] test sequence::model::field::tests::test_field_arrow_type ... ok [INFO] [stdout] test sequence::model::batch::tests::test_push_fastq_record ... ok [INFO] [stdout] test sequence::model::field::tests::test_field_builder_push_fasta ... ok [INFO] [stdout] test sequence::model::field::tests::test_field_builder_push_fastq ... ok [INFO] [stdout] test sequence::model::tests::test_fasta_defaults ... ok [INFO] [stdout] test sequence::model::field::tests::test_field_from_str ... ok [INFO] [stdout] test sequence::model::tests::test_custom_fields ... ok [INFO] [stdout] test sequence::model::tests::test_fastq_defaults ... ok [INFO] [stdout] test sequence::model::tests::test_project ... ok [INFO] [stdout] test sequence::scanner::fasta::tests::test_scanner_default ... ok [INFO] [stdout] test sequence::scanner::fasta::tests::test_scanner_scan ... ok [INFO] [stdout] test sequence::scanner::fasta::tests::test_scanner_scan_query ... ok [INFO] [stdout] test sequence::scanner::fasta::tests::test_scanner_schema ... ok [INFO] [stdout] test sequence::scanner::fastq::tests::test_scanner_default ... ok [INFO] [stdout] test sequence::scanner::fastq::tests::test_scanner_scan ... ok [INFO] [stdout] test alignment::model::batch::tests::test_finish ... ok [INFO] [stdout] test sequence::scanner::fastq::tests::test_scanner_scan_with_limit ... ok [INFO] [stdout] test util::query::tests::test_byte_range_reader_empty_ranges ... ok [INFO] [stdout] test util::query::tests::test_byte_range_reader_full_file ... ok [INFO] [stdout] test util::query::tests::test_byte_range_reader_multiple_ranges ... ok [INFO] [stdout] test util::query::tests::test_byte_range_reader_single_range ... ok [INFO] [stdout] test util::query::tests::test_byte_range_reader_with_bufread ... ok [INFO] [stdout] test util::query::tests::test_byte_range_reader_zero_length_range ... ok [INFO] [stdout] test util::tests::test_batches_to_ipc_with_dictionary ... ok [INFO] [stdout] test variant::model::batch::tests::test_batch_builder_new ... ok [INFO] [stdout] test variant::model::batch::tests::test_finish ... ok [INFO] [stdout] test variant::model::batch::tests::test_push_vcf_record ... ok [INFO] [stdout] test variant::model::batch::tests::test_push_vcf_record_with_double_semicolons_in_info ... ok [INFO] [stdout] test variant::model::batch::tests::test_schema ... ok [INFO] [stdout] test variant::model::field::tests::test_field_arrow_type ... ok [INFO] [stdout] test sequence::scanner::fastq::tests::test_scanner_schema ... ok [INFO] [stdout] test variant::model::field::tests::test_field_builder_push ... ok [INFO] [stdout] test variant::model::field::tests::test_field_builder_with_refs ... ok [INFO] [stdout] test variant::model::field::tests::test_field_from_str ... ok [INFO] [stdout] test variant::model::info::tests::test_infobuilder_append_value ... ok [INFO] [stdout] test variant::model::info::tests::test_infobuilder_append_null ... ok [INFO] [stdout] test variant::model::info::tests::test_infodef_new ... ok [INFO] [stdout] test variant::model::info::tests::test_infobuilder_arrow_type ... ok [INFO] [stdout] test variant::model::info::tests::test_infodef_try_from_valid ... ok [INFO] [stdout] test variant::model::tests::test_default_model ... ok [INFO] [stdout] test variant::model::tests::test_from_header ... ok [INFO] [stdout] test variant::model::tests::test_from_header_filtered ... ok [INFO] [stdout] test variant::model::tests::test_from_header_omit ... ok [INFO] [stdout] test variant::model::tests::test_genotype_empty_select_by_field_produces_no_columns ... ok [INFO] [stdout] test variant::model::tests::test_genotype_empty_select_by_sample_produces_empty_struct_columns ... ok [INFO] [stdout] test variant::model::tests::test_genotype_omit_deactivates_output_despite_samples ... ok [INFO] [stdout] test variant::model::tests::test_info_empty_select_produces_empty_struct_column ... ok [INFO] [stdout] test variant::model::tests::test_info_omit_produces_no_column ... ok [INFO] [stdout] test alignment::scanner::bam::tests::test_scan_with_multithreaded_reader ... FAILED [INFO] [stdout] test alignment::scanner::bam::tests::test_scan_query_with_multithreaded_reader ... FAILED [INFO] [stdout] test bbi::model::zoom::tests::test_invalid_field ... ok [INFO] [stdout] test variant::model::tests::test_nested_samples_projection ... ok [INFO] [stdout] test variant::model::tests::test_no_info_no_genotype ... ok [INFO] [stdout] test variant::model::tests::test_project_drops_info ... ok [INFO] [stdout] test variant::model::tests::test_nested_samples ... ok [INFO] [stdout] test bed::model::field_def::tests::test_fielddef_try_from_tuple_invalid_type ... ok [INFO] [stdout] test bed::model::schema::tests::test_bed_schema_invalid ... ok [INFO] [stdout] test bed::model::tests::test_invalid_field_name ... ok [INFO] [stdout] test bed::model::tests::test_project_unknown ... ok [INFO] [stdout] test variant::model::tests::test_project_keeps_info ... ok [INFO] [stdout] test gxf::model::attribute::tests::test_attribute_def_try_from_invalid ... ok [INFO] [stdout] test variant::model::tests::test_samples_empty_select_nested_produces_empty_struct_column ... ok [INFO] [stdout] test gxf::model::tests::test_invalid_attr_type ... ok [INFO] [stdout] test gxf::model::tests::test_invalid_field ... ok [INFO] [stdout] test variant::model::tests::test_samples_empty_select_unnested_produces_no_columns ... ok [INFO] [stdout] test gxf::model::tests::test_project_unknown_column ... ok [INFO] [stdout] test sequence::model::field::tests::test_field_builder_push_fasta_no_quality ... ok [INFO] [stdout] test variant::model::tests::test_samples_nested_default ... ok [INFO] [stdout] test sequence::model::tests::test_invalid_field ... ok [INFO] [stdout] test sequence::model::tests::test_project_unknown ... ok [INFO] [stdout] test variant::model::info::tests::test_infodef_try_from_invalid_number ... ok [INFO] [stdout] test variant::model::tests::test_invalid_field ... ok [INFO] [stdout] test variant::model::tests::test_samples_omit_deactivates_nested_column ... ok [INFO] [stdout] test variant::model::tests::test_project_samples ... ok [INFO] [stdout] test variant::model::tests::test_nested_samples_excluded ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- alignment::scanner::bam::tests::test_scan_with_multithreaded_reader stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'alignment::scanner::bam::tests::test_scan_with_multithreaded_reader' (58) panicked at src/alignment/scanner/bam.rs:287:66: [INFO] [stdout] called `Result::unwrap()` on an `Err` value: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5f434946801a - std[31e582c13f4e914f]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5f434946801a - std[31e582c13f4e914f]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5f434946801a - std[31e582c13f4e914f]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x5f434946801a - <::print::DisplayBacktrace as core[fa0eadad68403074]::fmt::Display>::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x5f43494802aa - ::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x5f43494802aa - core[fa0eadad68403074]::fmt::write [INFO] [stdout] 6: 0x5f434946d182 - std[31e582c13f4e914f]::io::default_write_fmt::> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5f434946d182 - as std[31e582c13f4e914f]::io::Write>::write_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x5f43494468cf - ::print [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:47:9 [INFO] [stdout] 9: 0x5f43494468cf - std[31e582c13f4e914f]::panicking::default_hook::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:292:27 [INFO] [stdout] 10: 0x5f4349460009 - std[31e582c13f4e914f]::panicking::default_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:316:9 [INFO] [stdout] 11: 0x5f4348e48c0c - core[fa0eadad68403074]::ops::function::Fn<(&'a std[31e582c13f4e914f]::panic::PanicHookInfo<'b>,), Output = ()> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::Fn<(&std[31e582c13f4e914f]::panic::PanicHookInfo,)>>::call [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2254:9 [INFO] [stdout] 12: 0x5f4348e48c0c - test[7530e63dc052480e]::test_main_with_exit_callback::::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x5f43494601c2 - core[fa0eadad68403074]::ops::function::Fn<(&'a std[31e582c13f4e914f]::panic::PanicHookInfo<'b>,), Output = ()> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::Fn<(&std[31e582c13f4e914f]::panic::PanicHookInfo,)>>::call [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2254:9 [INFO] [stdout] 14: 0x5f43494601c2 - std[31e582c13f4e914f]::panicking::panic_with_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:833:13 [INFO] [stdout] 15: 0x5f4349446988 - std[31e582c13f4e914f]::panicking::panic_handler::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:698:13 [INFO] [stdout] 16: 0x5f434943b639 - std[31e582c13f4e914f]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:182:18 [INFO] [stdout] 17: 0x5f434944778d - __rustc[fc8e3a9f23f26cb]::rust_begin_unwind [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:689:5 [INFO] [stdout] 18: 0x5f4349480abc - core[fa0eadad68403074]::panicking::panic_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x5f4349480832 - core[fa0eadad68403074]::result::unwrap_failed [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/result.rs:1867:5 [INFO] [stdout] 20: 0x5f4348cede84 - >::unwrap [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/result.rs:1233:23 [INFO] [stdout] 21: 0x5f4348cede84 - oxbow[a7a2d51b25d8206d]::alignment::scanner::bam::tests::mt_reader [INFO] [stdout] at /opt/rustwide/workdir/src/alignment/scanner/bam.rs:287:66 [INFO] [stdout] 22: 0x5f4348cee1a8 - oxbow[a7a2d51b25d8206d]::alignment::scanner::bam::tests::test_scan_with_multithreaded_reader [INFO] [stdout] at /opt/rustwide/workdir/src/alignment/scanner/bam.rs:299:36 [INFO] [stdout] 23: 0x5f4348ce07e7 - oxbow[a7a2d51b25d8206d]::alignment::scanner::bam::tests::test_scan_with_multithreaded_reader::{closure#0} [INFO] [stdout] at /opt/rustwide/workdir/src/alignment/scanner/bam.rs:298:45 [INFO] [stdout] 24: 0x5f4348cf8b36 - >::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x5f4348e3cceb - core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 26: 0x5f4348e3cceb - test[7530e63dc052480e]::__rust_begin_short_backtrace::, fn() -> core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:663:18 [INFO] [stdout] 27: 0x5f4348e496db - test[7530e63dc052480e]::run_test_in_process::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:686:74 [INFO] [stdout] 28: 0x5f4348e496db - as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panic/unwind_safe.rs:275:9 [INFO] [stdout] 29: 0x5f4348e496db - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::, core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 30: 0x5f4348e496db - std[31e582c13f4e914f]::panicking::catch_unwind::, core[fa0eadad68403074]::panic::unwind_safe::AssertUnwindSafe> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 31: 0x5f4348e496db - std[31e582c13f4e914f]::panic::catch_unwind::, core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 32: 0x5f4348e496db - test[7530e63dc052480e]::run_test_in_process [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:686:27 [INFO] [stdout] 33: 0x5f4348e496db - test[7530e63dc052480e]::run_test::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:607:43 [INFO] [stdout] 34: 0x5f4348e43b34 - test[7530e63dc052480e]::run_test::{closure#1} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:637:41 [INFO] [stdout] 35: 0x5f4348e43b34 - std[31e582c13f4e914f]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:166:18 [INFO] [stdout] 36: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::thread::lifecycle::spawn_unchecked::::{closure#1}::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/thread/lifecycle.rs:91:13 [INFO] [stdout] 37: 0x5f4348e4c2e2 - ::{closure#1}::{closure#0}> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panic/unwind_safe.rs:275:9 [INFO] [stdout] 38: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::::{closure#1}::{closure#0}>, ()> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 39: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::panicking::catch_unwind::<(), core[fa0eadad68403074]::panic::unwind_safe::AssertUnwindSafe::{closure#1}::{closure#0}>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 40: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::panic::catch_unwind::::{closure#1}::{closure#0}>, ()> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 41: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::thread::lifecycle::spawn_unchecked::::{closure#1} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/thread/lifecycle.rs:89:26 [INFO] [stdout] 42: 0x5f4348e4c2e2 - ::{closure#1} as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 43: 0x5f434946774f - + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2240:9 [INFO] [stdout] 44: 0x5f434946774f - ::new::thread_start [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/thread/unix.rs:118:17 [INFO] [stdout] 45: 0x77166d1efaa4 - [INFO] [stdout] 46: 0x77166d27ca64 - clone [INFO] [stdout] 47: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- alignment::scanner::bam::tests::test_scan_query_with_multithreaded_reader stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'alignment::scanner::bam::tests::test_scan_query_with_multithreaded_reader' (57) panicked at src/alignment/scanner/bam.rs:287:66: [INFO] [stdout] called `Result::unwrap()` on an `Err` value: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5f434946801a - std[31e582c13f4e914f]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5f434946801a - std[31e582c13f4e914f]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5f434946801a - std[31e582c13f4e914f]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x5f434946801a - <::print::DisplayBacktrace as core[fa0eadad68403074]::fmt::Display>::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x5f43494802aa - ::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x5f43494802aa - core[fa0eadad68403074]::fmt::write [INFO] [stdout] 6: 0x5f434946d182 - std[31e582c13f4e914f]::io::default_write_fmt::> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5f434946d182 - as std[31e582c13f4e914f]::io::Write>::write_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x5f43494468cf - ::print [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:47:9 [INFO] [stdout] 9: 0x5f43494468cf - std[31e582c13f4e914f]::panicking::default_hook::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:292:27 [INFO] [stdout] 10: 0x5f4349460009 - std[31e582c13f4e914f]::panicking::default_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:316:9 [INFO] [stdout] 11: 0x5f4348e48c0c - core[fa0eadad68403074]::ops::function::Fn<(&'a std[31e582c13f4e914f]::panic::PanicHookInfo<'b>,), Output = ()> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::Fn<(&std[31e582c13f4e914f]::panic::PanicHookInfo,)>>::call [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2254:9 [INFO] [stdout] 12: 0x5f4348e48c0c - test[7530e63dc052480e]::test_main_with_exit_callback::::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x5f43494601c2 - core[fa0eadad68403074]::ops::function::Fn<(&'a std[31e582c13f4e914f]::panic::PanicHookInfo<'b>,), Output = ()> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::Fn<(&std[31e582c13f4e914f]::panic::PanicHookInfo,)>>::call [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2254:9 [INFO] [stdout] 14: 0x5f43494601c2 - std[31e582c13f4e914f]::panicking::panic_with_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:833:13 [INFO] [stdout] 15: 0x5f4349446988 - std[31e582c13f4e914f]::panicking::panic_handler::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:698:13 [INFO] [stdout] 16: 0x5f434943b639 - std[31e582c13f4e914f]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:182:18 [INFO] [stdout] 17: 0x5f434944778d - __rustc[fc8e3a9f23f26cb]::rust_begin_unwind [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:689:5 [INFO] [stdout] 18: 0x5f4349480abc - core[fa0eadad68403074]::panicking::panic_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x5f4349480832 - core[fa0eadad68403074]::result::unwrap_failed [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/result.rs:1867:5 [INFO] [stdout] 20: 0x5f4348cede84 - >::unwrap [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/result.rs:1233:23 [INFO] [stdout] 21: 0x5f4348cede84 - oxbow[a7a2d51b25d8206d]::alignment::scanner::bam::tests::mt_reader [INFO] [stdout] at /opt/rustwide/workdir/src/alignment/scanner/bam.rs:287:66 [INFO] [stdout] 22: 0x5f4348cee8a3 - oxbow[a7a2d51b25d8206d]::alignment::scanner::bam::tests::test_scan_query_with_multithreaded_reader [INFO] [stdout] at /opt/rustwide/workdir/src/alignment/scanner/bam.rs:310:36 [INFO] [stdout] 23: 0x5f4348ce0817 - oxbow[a7a2d51b25d8206d]::alignment::scanner::bam::tests::test_scan_query_with_multithreaded_reader::{closure#0} [INFO] [stdout] at /opt/rustwide/workdir/src/alignment/scanner/bam.rs:309:51 [INFO] [stdout] 24: 0x5f4348cf8b76 - >::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x5f4348e3cceb - core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 26: 0x5f4348e3cceb - test[7530e63dc052480e]::__rust_begin_short_backtrace::, fn() -> core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:663:18 [INFO] [stdout] 27: 0x5f4348e496db - test[7530e63dc052480e]::run_test_in_process::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:686:74 [INFO] [stdout] 28: 0x5f4348e496db - as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panic/unwind_safe.rs:275:9 [INFO] [stdout] 29: 0x5f4348e496db - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::, core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 30: 0x5f4348e496db - std[31e582c13f4e914f]::panicking::catch_unwind::, core[fa0eadad68403074]::panic::unwind_safe::AssertUnwindSafe> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 31: 0x5f4348e496db - std[31e582c13f4e914f]::panic::catch_unwind::, core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 32: 0x5f4348e496db - test[7530e63dc052480e]::run_test_in_process [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:686:27 [INFO] [stdout] 33: 0x5f4348e496db - test[7530e63dc052480e]::run_test::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:607:43 [INFO] [stdout] 34: 0x5f4348e43b34 - test[7530e63dc052480e]::run_test::{closure#1} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:637:41 [INFO] [stdout] 35: 0x5f4348e43b34 - std[31e582c13f4e914f]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:166:18 [INFO] [stdout] 36: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::thread::lifecycle::spawn_unchecked::::{closure#1}::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/thread/lifecycle.rs:91:13 [INFO] [stdout] 37: 0x5f4348e4c2e2 - ::{closure#1}::{closure#0}> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panic/unwind_safe.rs:275:9 [INFO] [stdout] 38: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::::{closure#1}::{closure#0}>, ()> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 39: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::panicking::catch_unwind::<(), core[fa0eadad68403074]::panic::unwind_safe::AssertUnwindSafe::{closure#1}::{closure#0}>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 40: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::panic::catch_unwind::::{closure#1}::{closure#0}>, ()> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 41: 0x5f4348e4c2e2 - std[31e582c13f4e914f]::thread::lifecycle::spawn_unchecked::::{closure#1} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/thread/lifecycle.rs:89:26 [INFO] [stdout] 42: 0x5f4348e4c2e2 - ::{closure#1} as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 43: 0x5f434946774f - + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2240:9 [INFO] [stdout] 44: 0x5f434946774f - ::new::thread_start [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/thread/unix.rs:118:17 [INFO] [stdout] 45: 0x77166d1efaa4 - [INFO] [stdout] 46: 0x77166d27ca64 - clone [INFO] [stdout] 47: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] alignment::scanner::bam::tests::test_scan_query_with_multithreaded_reader [INFO] [stdout] alignment::scanner::bam::tests::test_scan_with_multithreaded_reader [INFO] [stdout] [INFO] [stdout] test result: FAILED. 189 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.50s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "3862bf959286c26c7d745e0000937166353592f42614f54de012a2e2bd532c4f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3862bf959286c26c7d745e0000937166353592f42614f54de012a2e2bd532c4f", kill_on_drop: false }` [INFO] [stdout] 3862bf959286c26c7d745e0000937166353592f42614f54de012a2e2bd532c4f