[INFO] fetching crate nucleic-acid 0.1.1... [INFO] testing nucleic-acid-0.1.1 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-2 [INFO] extracting crate nucleic-acid 0.1.1 into /workspace/builds/worker-1-tc1/source [INFO] started tweaking crates.io crate nucleic-acid 0.1.1 [INFO] finished tweaking crates.io crate nucleic-acid 0.1.1 [INFO] tweaked toml for crates.io crate nucleic-acid 0.1.1 written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate nucleic-acid 0.1.1 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 15 packages to latest compatible versions [INFO] [stderr] Adding bit-vec v0.4.4 (available: v0.9.1) [INFO] [stderr] Adding lazy_static v0.2.11 (available: v1.5.0) [INFO] [stderr] Adding num-traits v0.1.43 (available: v0.2.19) [INFO] [stderr] Adding rand v0.3.23 (available: v0.10.1) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: `package.edition` is unspecified, defaulting to `2015` while the latest is `2024` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded bit-vec v0.4.4 [INFO] [stderr] Downloaded lazy_static v0.2.11 [INFO] [stderr] Downloaded num-traits v0.1.43 [INFO] [stderr] Downloaded rand v0.3.23 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 9a01c2dbcafcb84a48ef97ceb76c901ecc4c0aca2c198d62b39eebfba78f055d [INFO] running `Command { std: "docker" "start" "-a" "9a01c2dbcafcb84a48ef97ceb76c901ecc4c0aca2c198d62b39eebfba78f055d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "9a01c2dbcafcb84a48ef97ceb76c901ecc4c0aca2c198d62b39eebfba78f055d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9a01c2dbcafcb84a48ef97ceb76c901ecc4c0aca2c198d62b39eebfba78f055d", kill_on_drop: false }` [INFO] [stdout] 9a01c2dbcafcb84a48ef97ceb76c901ecc4c0aca2c198d62b39eebfba78f055d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 21e0a14df3f8bf46678be100c04a1e6eefc503eeeaaba4210a04f7326d04b1ae [INFO] running `Command { std: "docker" "start" "-a" "21e0a14df3f8bf46678be100c04a1e6eefc503eeeaaba4210a04f7326d04b1ae", kill_on_drop: false }` [INFO] [stderr] warning: `package.edition` is unspecified, defaulting to `2015` while the latest is `2024` [INFO] [stderr] Compiling bit-vec v0.4.4 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling nucleic-acid v0.1.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: anonymous parameters are deprecated and will be removed in the next edition [INFO] [stdout] --> src/bits_vec.rs:41:19 [INFO] [stdout] | [INFO] [stdout] 41 | fn from_usize(usize) -> Self; [INFO] [stdout] | ^^^^^ help: try naming the parameter or explicitly ignoring it: `_: usize` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2018! [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: `#[warn(anonymous_parameters)]` (part of `#[warn(rust_2018_compatibility)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary transmute [INFO] [stdout] --> src/bits_vec.rs:56:18 [INFO] [stdout] | [INFO] [stdout] 56 | unsafe { mem::transmute(i as u32) } [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: consider using `char::from_u32(…).unwrap()` [INFO] [stdout] = note: `#[warn(unnecessary_transmutes)]` on by default [INFO] [stdout] help: replace this with [INFO] [stdout] | [INFO] [stdout] 56 - unsafe { mem::transmute(i as u32) } [INFO] [stdout] 56 + unsafe { char::from_u32_unchecked(i as u32) } [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bits_vec.rs:323:17 [INFO] [stdout] | [INFO] [stdout] 323 | pub fn iter(&self) -> Iter { [INFO] [stdout] | ^^^^^ ^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 323 | pub fn iter(&self) -> Iter<'_, T> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.66s [INFO] running `Command { std: "docker" "inspect" "21e0a14df3f8bf46678be100c04a1e6eefc503eeeaaba4210a04f7326d04b1ae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "21e0a14df3f8bf46678be100c04a1e6eefc503eeeaaba4210a04f7326d04b1ae", kill_on_drop: false }` [INFO] [stdout] 21e0a14df3f8bf46678be100c04a1e6eefc503eeeaaba4210a04f7326d04b1ae [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6fe0b40a7b681e7627e5ecfd797578a4c12cb7f26ca330b6c2c4d08eacbb94ae [INFO] running `Command { std: "docker" "start" "-a" "6fe0b40a7b681e7627e5ecfd797578a4c12cb7f26ca330b6c2c4d08eacbb94ae", kill_on_drop: false }` [INFO] [stderr] warning: `package.edition` is unspecified, defaulting to `2015` while the latest is `2024` [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling lazy_static v0.2.11 [INFO] [stdout] warning: anonymous parameters are deprecated and will be removed in the next edition [INFO] [stdout] --> src/bits_vec.rs:41:19 [INFO] [stdout] | [INFO] [stdout] 41 | fn from_usize(usize) -> Self; [INFO] [stdout] | ^^^^^ help: try naming the parameter or explicitly ignoring it: `_: usize` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2018! [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: `#[warn(anonymous_parameters)]` (part of `#[warn(rust_2018_compatibility)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary transmute [INFO] [stdout] --> src/bits_vec.rs:56:18 [INFO] [stdout] | [INFO] [stdout] 56 | unsafe { mem::transmute(i as u32) } [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: consider using `char::from_u32(…).unwrap()` [INFO] [stdout] = note: `#[warn(unnecessary_transmutes)]` on by default [INFO] [stdout] help: replace this with [INFO] [stdout] | [INFO] [stdout] 56 - unsafe { mem::transmute(i as u32) } [INFO] [stdout] 56 + unsafe { char::from_u32_unchecked(i as u32) } [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bits_vec.rs:323:17 [INFO] [stdout] | [INFO] [stdout] 323 | pub fn iter(&self) -> Iter { [INFO] [stdout] | ^^^^^ ^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 323 | pub fn iter(&self) -> Iter<'_, T> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling nucleic-acid v0.1.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: anonymous parameters are deprecated and will be removed in the next edition [INFO] [stdout] --> src/bits_vec.rs:41:19 [INFO] [stdout] | [INFO] [stdout] 41 | fn from_usize(usize) -> Self; [INFO] [stdout] | ^^^^^ help: try naming the parameter or explicitly ignoring it: `_: usize` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2018! [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: `#[warn(anonymous_parameters)]` (part of `#[warn(rust_2018_compatibility)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary transmute [INFO] [stdout] --> src/bits_vec.rs:56:18 [INFO] [stdout] | [INFO] [stdout] 56 | unsafe { mem::transmute(i as u32) } [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: consider using `char::from_u32(…).unwrap()` [INFO] [stdout] = note: `#[warn(unnecessary_transmutes)]` on by default [INFO] [stdout] help: replace this with [INFO] [stdout] | [INFO] [stdout] 56 - unsafe { mem::transmute(i as u32) } [INFO] [stdout] 56 + unsafe { char::from_u32_unchecked(i as u32) } [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bits_vec.rs:323:17 [INFO] [stdout] | [INFO] [stdout] 323 | pub fn iter(&self) -> Iter { [INFO] [stdout] | ^^^^^ ^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 323 | pub fn iter(&self) -> Iter<'_, T> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.88s [INFO] running `Command { std: "docker" "inspect" "6fe0b40a7b681e7627e5ecfd797578a4c12cb7f26ca330b6c2c4d08eacbb94ae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6fe0b40a7b681e7627e5ecfd797578a4c12cb7f26ca330b6c2c4d08eacbb94ae", kill_on_drop: false }` [INFO] [stdout] 6fe0b40a7b681e7627e5ecfd797578a4c12cb7f26ca330b6c2c4d08eacbb94ae [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 06c3dd484dca5942129f82512e70695bac562787b9f90a3ded8aec1279e44a30 [INFO] running `Command { std: "docker" "start" "-a" "06c3dd484dca5942129f82512e70695bac562787b9f90a3ded8aec1279e44a30", kill_on_drop: false }` [INFO] [stderr] warning: `package.edition` is unspecified, defaulting to `2015` while the latest is `2024` [INFO] [stderr] warning: anonymous parameters are deprecated and will be removed in the next edition [INFO] [stderr] --> src/bits_vec.rs:41:19 [INFO] [stderr] | [INFO] [stderr] 41 | fn from_usize(usize) -> Self; [INFO] [stderr] | ^^^^^ help: try naming the parameter or explicitly ignoring it: `_: usize` [INFO] [stderr] | [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2018! [INFO] [stderr] = note: for more information, see [INFO] [stderr] = note: `#[warn(anonymous_parameters)]` (part of `#[warn(rust_2018_compatibility)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unnecessary transmute [INFO] [stderr] --> src/bits_vec.rs:56:18 [INFO] [stderr] | [INFO] [stderr] 56 | unsafe { mem::transmute(i as u32) } [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: consider using `char::from_u32(…).unwrap()` [INFO] [stderr] = note: `#[warn(unnecessary_transmutes)]` on by default [INFO] [stderr] help: replace this with [INFO] [stderr] | [INFO] [stderr] 56 - unsafe { mem::transmute(i as u32) } [INFO] [stderr] 56 + unsafe { char::from_u32_unchecked(i as u32) } [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stderr] --> src/bits_vec.rs:323:17 [INFO] [stderr] | [INFO] [stderr] 323 | pub fn iter(&self) -> Iter { [INFO] [stderr] | ^^^^^ ^^^^^^^ the same lifetime is hidden here [INFO] [stderr] | | [INFO] [stderr] | the lifetime is elided here [INFO] [stderr] | [INFO] [stderr] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stderr] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stderr] help: use `'_` for type paths [INFO] [stderr] | [INFO] [stderr] 323 | pub fn iter(&self) -> Iter<'_, T> { [INFO] [stderr] | +++ [INFO] [stderr] [INFO] [stderr] warning: `nucleic-acid` (lib) generated 3 warnings (run `cargo fix --lib -p nucleic-acid` to apply 3 suggestions) [INFO] [stderr] warning: `nucleic-acid` (lib test) generated 3 warnings (3 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.05s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/nucleic_acid-96e98753406ccb66) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test bits_vec::tests::test_everything_with_enum ... ok [INFO] [stdout] test bits_vec::tests::test_truncate ... ok [INFO] [stdout] test bwt::tests::test_bwt_and_ibwt ... ok [INFO] [stdout] test bwt::tests::test_fm_index ... ok [INFO] [stdout] test sa::tests::test_suffix_array ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests nucleic_acid [INFO] [stdout] [INFO] [stdout] running 7 tests [INFO] [stdout] test src/bwt.rs - bwt::ibwt (line 36) ... ok [INFO] [stdout] test src/bits_vec.rs - bits_vec::BitsVec (line 85) ... ok [INFO] [stdout] test src/bwt.rs - bwt::FMIndex (line 76) ... ok [INFO] [stdout] test src/bwt.rs - bwt::bwt (line 8) ... ok [INFO] [stdout] test src/bits_vec.rs - bits_vec::ReprUsize (line 13) ... ok [INFO] [stdout] test src/bwt.rs - bwt::FMIndex::nearest (line 179) ... ok [INFO] [stdout] test src/sa.rs - sa::suffix_array (line 94) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.66s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "06c3dd484dca5942129f82512e70695bac562787b9f90a3ded8aec1279e44a30", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "06c3dd484dca5942129f82512e70695bac562787b9f90a3ded8aec1279e44a30", kill_on_drop: false }` [INFO] [stdout] 06c3dd484dca5942129f82512e70695bac562787b9f90a3ded8aec1279e44a30