[INFO] fetching crate umi-tools-rs 1.1.0... [INFO] testing umi-tools-rs-1.1.0 against try#dec9417b8611e34e787a3e4c37686b5131f9e5c5 for pr-154210-1 [INFO] extracting crate umi-tools-rs 1.1.0 into /workspace/builds/worker-3-tc2/source [INFO] started tweaking crates.io crate umi-tools-rs 1.1.0 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate umi-tools-rs 1.1.0 [INFO] tweaked toml for crates.io crate umi-tools-rs 1.1.0 written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate umi-tools-rs 1.1.0 on toolchain dec9417b8611e34e787a3e4c37686b5131f9e5c5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate umi-tools-rs 1.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 593418207cb11c500d4ff6584d26da6bf0adfabacf7e356cb9a8cb092c4dd0ca [INFO] running `Command { std: "docker" "start" "-a" "593418207cb11c500d4ff6584d26da6bf0adfabacf7e356cb9a8cb092c4dd0ca", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "593418207cb11c500d4ff6584d26da6bf0adfabacf7e356cb9a8cb092c4dd0ca", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "593418207cb11c500d4ff6584d26da6bf0adfabacf7e356cb9a8cb092c4dd0ca", kill_on_drop: false }` [INFO] [stdout] 593418207cb11c500d4ff6584d26da6bf0adfabacf7e356cb9a8cb092c4dd0ca [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a0161585bebedf8b30adcdc64b15452254348d7dacc7bb3c42546a9bec03a2eb [INFO] running `Command { std: "docker" "start" "-a" "a0161585bebedf8b30adcdc64b15452254348d7dacc7bb3c42546a9bec03a2eb", kill_on_drop: false }` [INFO] [stderr] Compiling regex-syntax v0.8.9 [INFO] [stderr] Compiling memchr v2.8.0 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling libloading v0.8.9 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling bitflags v2.11.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling syn v2.0.115 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling aho-corasick v1.1.4 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling percent-encoding v2.3.2 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling cc v1.2.55 [INFO] [stderr] Compiling anstyle-parse v0.2.7 [INFO] [stderr] Compiling form_urlencoded v1.2.2 [INFO] [stderr] Compiling colorchoice v1.0.4 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling buffer-redux v1.1.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling anstream v0.6.21 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling clap_lex v1.0.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling umi-tools-rs v1.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling clap_builder v4.5.58 [INFO] [stderr] Compiling regex-automata v0.4.14 [INFO] [stderr] Compiling cmake v0.1.57 [INFO] [stderr] Compiling zstd-sys v2.0.16+zstd.1.5.7 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling liblzma-sys v0.3.13 [INFO] [stderr] Compiling libz-sys v1.1.23 [INFO] [stderr] Compiling libz-ng-sys v1.1.23 [INFO] [stderr] Compiling regex v1.12.3 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.8.1 [INFO] [stderr] Compiling zerovec-derive v0.11.2 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling liblzma v0.3.6 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Compiling clap_derive v4.5.55 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling yoke v0.8.1 [INFO] [stderr] Compiling zerotrie v0.2.3 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling zerovec v0.11.5 [INFO] [stderr] Compiling tinystr v0.8.2 [INFO] [stderr] Compiling potential_utf v0.1.4 [INFO] [stderr] Compiling zstd v0.13.3 [INFO] [stderr] Compiling icu_locale_core v2.1.1 [INFO] [stderr] Compiling icu_collections v2.1.1 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling clap v4.5.58 [INFO] [stderr] Compiling icu_provider v2.1.1 [INFO] [stderr] Compiling icu_normalizer v2.1.1 [INFO] [stderr] Compiling icu_properties v2.1.2 [INFO] [stderr] Compiling idna_adapter v1.2.1 [INFO] [stderr] Compiling idna v1.1.0 [INFO] [stderr] Compiling url v2.5.8 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling flate2 v1.1.9 [INFO] [stderr] Compiling needletail v0.6.3 [INFO] [stderr] Compiling rust-htslib v1.0.0 [INFO] [stderr] Compiling umi-core v1.1.0 [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 06s [INFO] running `Command { std: "docker" "inspect" "a0161585bebedf8b30adcdc64b15452254348d7dacc7bb3c42546a9bec03a2eb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a0161585bebedf8b30adcdc64b15452254348d7dacc7bb3c42546a9bec03a2eb", kill_on_drop: false }` [INFO] [stdout] a0161585bebedf8b30adcdc64b15452254348d7dacc7bb3c42546a9bec03a2eb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4b54dfd6379d06607301341601fc03c3e5205f2c0e164e32d1e774884791c098 [INFO] running `Command { std: "docker" "start" "-a" "4b54dfd6379d06607301341601fc03c3e5205f2c0e164e32d1e774884791c098", kill_on_drop: false }` [INFO] [stderr] Compiling umi-tools-rs v1.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.23s [INFO] running `Command { std: "docker" "inspect" "4b54dfd6379d06607301341601fc03c3e5205f2c0e164e32d1e774884791c098", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4b54dfd6379d06607301341601fc03c3e5205f2c0e164e32d1e774884791c098", kill_on_drop: false }` [INFO] [stdout] 4b54dfd6379d06607301341601fc03c3e5205f2c0e164e32d1e774884791c098 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 20a8d2935802ed61bcea79b7fc6241ff10fdbe4f073e1d6aa34af76388be2ca9 [INFO] running `Command { std: "docker" "start" "-a" "20a8d2935802ed61bcea79b7fc6241ff10fdbe4f073e1d6aa34af76388be2ca9", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.15s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/umi_tools_rs-82d84040b731d073) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/extract_integration.rs (/opt/rustwide/target/debug/deps/extract_integration-bba4d932ba26346b) [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test extract_string_matches_umi_tools_reference ... ok [INFO] [stdout] test extract_regex_matches_string_method ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.37s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "20a8d2935802ed61bcea79b7fc6241ff10fdbe4f073e1d6aa34af76388be2ca9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "20a8d2935802ed61bcea79b7fc6241ff10fdbe4f073e1d6aa34af76388be2ca9", kill_on_drop: false }` [INFO] [stdout] 20a8d2935802ed61bcea79b7fc6241ff10fdbe4f073e1d6aa34af76388be2ca9