[INFO] fetching crate microbiorust-py 0.1.5... [INFO] testing microbiorust-py-0.1.5 against try#dec9417b8611e34e787a3e4c37686b5131f9e5c5 for pr-154210-1 [INFO] extracting crate microbiorust-py 0.1.5 into /workspace/builds/worker-5-tc2/source [INFO] started tweaking crates.io crate microbiorust-py 0.1.5 [INFO] finished tweaking crates.io crate microbiorust-py 0.1.5 [INFO] tweaked toml for crates.io crate microbiorust-py 0.1.5 written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate microbiorust-py 0.1.5 on toolchain dec9417b8611e34e787a3e4c37686b5131f9e5c5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate microbiorust-py 0.1.5 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7e31d6858cfd02b0f83d8b68e0d5e13e15e635495bc2d5e2304a1ea9a523f1d2 [INFO] running `Command { std: "docker" "start" "-a" "7e31d6858cfd02b0f83d8b68e0d5e13e15e635495bc2d5e2304a1ea9a523f1d2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7e31d6858cfd02b0f83d8b68e0d5e13e15e635495bc2d5e2304a1ea9a523f1d2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7e31d6858cfd02b0f83d8b68e0d5e13e15e635495bc2d5e2304a1ea9a523f1d2", kill_on_drop: false }` [INFO] [stdout] 7e31d6858cfd02b0f83d8b68e0d5e13e15e635495bc2d5e2304a1ea9a523f1d2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 61582711b6c6b967000461b4937f635f389232b7a6fc9d5ce61229560742396b [INFO] running `Command { std: "docker" "start" "-a" "61582711b6c6b967000461b4937f635f389232b7a6fc9d5ce61229560742396b", kill_on_drop: false }` [INFO] [stderr] Compiling target-lexicon v0.13.4 [INFO] [stderr] Compiling zerocopy v0.8.39 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling syn v2.0.115 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling regex-syntax v0.8.9 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling parking_lot_core v0.9.12 [INFO] [stderr] Compiling indexmap v2.13.0 [INFO] [stderr] Compiling futures-channel v0.3.31 [INFO] [stderr] Compiling anyhow v1.0.101 [INFO] [stderr] Compiling proc-macro-error-attr2 v2.0.0 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling fixedbitset v0.5.7 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling parking_lot v0.12.5 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Compiling strum v0.26.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling compression-core v0.4.31 [INFO] [stderr] Compiling clap_builder v4.5.58 [INFO] [stderr] Compiling compression-codecs v0.4.36 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling unindent v0.2.4 [INFO] [stderr] Compiling protein-translate v0.2.0 [INFO] [stderr] Compiling petgraph v0.8.3 [INFO] [stderr] Compiling indoc v2.0.7 [INFO] [stderr] Compiling pyo3-build-config v0.25.1 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v5.1.0 [INFO] [stderr] Compiling chrono v0.4.43 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling ndarray v0.16.1 [INFO] [stderr] Compiling simba v0.9.1 [INFO] [stderr] Compiling pyo3-macros-backend v0.25.1 [INFO] [stderr] Compiling pyo3-ffi v0.25.1 [INFO] [stderr] Compiling pyo3 v0.25.1 [INFO] [stderr] Compiling regex-automata v0.4.14 [INFO] [stderr] Compiling proc-macro-error2 v2.0.1 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling tokio-macros v2.6.0 [INFO] [stderr] Compiling futures-macro v0.3.31 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling getset v0.1.6 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling clap_derive v4.5.55 [INFO] [stderr] Compiling tokio v1.49.0 [INFO] [stderr] Compiling futures-util v0.3.31 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling clap v4.5.58 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling regex v1.12.3 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling pyo3-macros v0.25.1 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling nalgebra v0.33.2 [INFO] [stderr] Compiling multimap v0.10.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling futures-executor v0.3.31 [INFO] [stderr] Compiling futures v0.3.31 [INFO] [stderr] Compiling async-compression v0.4.39 [INFO] [stderr] Compiling quick-xml v0.38.4 [INFO] [stderr] Compiling pythonize v0.25.0 [INFO] [stderr] Compiling statrs v0.18.0 [INFO] [stderr] Compiling bio v3.0.0 [INFO] [stderr] Compiling bio v2.3.0 [INFO] [stderr] Compiling microBioRust v0.1.3 [INFO] [stderr] Compiling microBioRust-seqmetrics v0.1.3 [INFO] [stderr] Compiling microbiorust-py v0.1.5 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 50.44s [INFO] running `Command { std: "docker" "inspect" "61582711b6c6b967000461b4937f635f389232b7a6fc9d5ce61229560742396b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "61582711b6c6b967000461b4937f635f389232b7a6fc9d5ce61229560742396b", kill_on_drop: false }` [INFO] [stdout] 61582711b6c6b967000461b4937f635f389232b7a6fc9d5ce61229560742396b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4a8b74a4b1311626aa7982c0fca188d59d8c0ff88ea1e00c48d2d34cdfc263fd [INFO] running `Command { std: "docker" "start" "-a" "4a8b74a4b1311626aa7982c0fca188d59d8c0ff88ea1e00c48d2d34cdfc263fd", kill_on_drop: false }` [INFO] [stderr] Compiling microbiorust-py v0.1.5 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/opt/rustwide/target/debug/deps/rustc8702z4/symbols.o" "<10 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libmicroBioRust_seqmetrics-5a73e3c2339364d7,libbio-4a89e579fa8205b0,libmicroBioRust-c0dc69d5e3809c63,libserde_json-9a1e181b2a75d420,libzmij-07c2bc01ed4c756c,libquick_xml-65625727a68f1bc3,libasync_compression-38a42d30eb837dab,libcompression_codecs-be8d0cc957241604,libflate2-7ed963f28e1781ac,libminiz_oxide-0604c014cfd3f447,libsimd_adler32-b082e9f39b443ffb,libcrc32fast-66fcb8dfd77ba9de,libcompression_core-5624d7ace9667e75,libprotein_translate-67e03636492389be,libchrono-bb8896209ad0785c,libiana_time_zone-e4284183d46316cc,libbio-c7f040cdac5f1efc,libstrum-cd0529b9bac5883b,libcsv-013debb99281ea3f,libryu-ace37e26d8308611,libitoa-ae20521aea192d35,libcsv_core-1207486a54d4b450,libbytecount-3d074ddb37370d4d,libtriple_accel-5001fad5b3da9792,libeditdistancek-0346ad0312e0678a,libitertools_num-a9617c9c7c682f8a,libenum_map-47ab4275b471cfaf,libstatrs-8689c465a336c19b,libnalgebra-84491ab7558d3d10,librand_distr-8f628014a2e005cd,libnum_rational-7a409472f353c811,libtypenum-0e02f3386ab040bb,libsimba-65047ff1ff1628df,libwide-c39d7a0d7eadf47f,libsafe_arch-2c25341f423e301b,libbytemuck-225736d622151e28,librand-7cb8e5b8bde00e37,librand_chacha-f42088e4bff344ef,libppv_lite86-7e18c5ecbabbe7da,libzerocopy-7b8e2db7912d95c2,librand_core-44541de97192ee28,libgetrandom-a3e528362ec8c810,libordered_float-a1ced89613274d52,libndarray-a0bf950601be51f6,libmatrixmultiply-e6c76d7e453bc5d1,libnum_complex-c8a38b35e430f3d1,librawpointer-a726d041f28ef5ec,libmultimap-1be5517315e7feb1,libitertools-bb9dfc9f1c5526ce,libeither-ef22a4c75605e12f,libthiserror-c2c0ea35a4c52fc2,libnum_integer-b7cf06ad577e6a9a,libbv-be95b9b6692aa19b,libvec_map-7a4ba590ef6a8ec2,libbit_set-3f4855eabd5929f5,libbit_vec-d65fb98b7c3788f8,libbio_types-c406bf7dd8572453,libthiserror-2405ee2e570192d3,libregex-a8874466bdd97bb4,libregex_automata-4d2538d9ce677e25,libaho_corasick-911505ac5b3ee82d,libmemchr-9b3f20cfb3ebd3b2,libregex_syntax-4c74db8415f6ed3c,liblazy_static-b3603208c0de2608,libfxhash-bf471bc75929f9a0,libbyteorder-1efcbe4f07366651,libpetgraph-86263c3cdc938b91,libhashbrown-0ebcc041e2e68b39,libfoldhash-a84df4cbe8daa3b8,libindexmap-eb3e47818a3b02b6,libequivalent-7e0e8cbe6c474a67,libhashbrown-00f937fe1169347c,libfixedbitset-1d9e4d386551ec07,libnewtype_derive-e5f6b8c806ef3d8a,libcustom_derive-7dc5746d463a3d5a,libapprox-607a1bfcf54e8c83,libnum_traits-03fd58aafdbeefe6,libanyhow-67c4835fa8a1d60d,libtokio-dd2377c48b537984,libsignal_hook_registry-5720ab1df4abbddd,liberrno-a52f0e2de63da12d,libsocket2-a9e11c9a999805a7,libbytes-ff5aca13e3e348ea,libmio-893c04095b2b1201,libparking_lot-4655a191b76a8b42,libparking_lot_core-ffa5d6ab3af4f7d3,libcfg_if-5af52f617df93f8f,libsmallvec-45f6e3b8047adea1,liblock_api-ec1e77aca18a533b,libscopeguard-d52bd00767847e44,libpin_project_lite-bedc6e0acd72ff2a,libpythonize-0c5f6502f52efb2a,libserde-1af55aaf39d0603b,libserde_core-1bd3301df0d96ee1,libpyo3-50c2f1782a8a9460,libmemoffset-3c8ed49e1d551200,libonce_cell-0ba6aecba7086d38,libpyo3_ffi-1f9a3cf0e5e9da51,liblibc-65ee1eb217d721f2,libunindent-37c9ebf01f989e9d}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/opt/rustwide/target/debug/deps/rustc8702z4/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/microbiorust-27f06eaef6a5a08c" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: rust-lld: error: undefined symbol: PyList_New [INFO] [stdout] >>> referenced by list.rs:38 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-0.25.1/src/types/list.rs:38) [INFO] [stdout] >>> /opt/rustwide/target/debug/deps/microbiorust-27f06eaef6a5a08c.microbiorust.3f7329a77fb376df-cgu.3.rcgu.o:(pyo3::types::list::try_new_from_iter::<&mut core::iter::adapters::map::Map, ::owned_sequence_into_pyobject>::{closure#0}>>) [INFO] [stdout] >>> referenced by list.rs:38 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-0.25.1/src/types/list.rs:38) [INFO] [stdout] >>> /opt/rustwide/target/debug/deps/microbiorust-27f06eaef6a5a08c.microbiorust.3f7329a77fb376df-cgu.3.rcgu.o:(pyo3::types::list::try_new_from_iter::<&mut core::iter::adapters::map::Map, ::owned_sequence_into_pyobject>::{closure#0}>>) [INFO] [stdout] >>> referenced by list.rs:105 (src/types/list.rs:105) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.03.rcgu.o:(::empty) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyList_SetItem [INFO] [stdout] >>> referenced by list.rs:51 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-0.25.1/src/types/list.rs:51) [INFO] [stdout] >>> /opt/rustwide/target/debug/deps/microbiorust-27f06eaef6a5a08c.microbiorust.3f7329a77fb376df-cgu.3.rcgu.o:(pyo3::types::list::try_new_from_iter::<&mut core::iter::adapters::map::Map, ::owned_sequence_into_pyobject>::{closure#0}>>::{closure#0}) [INFO] [stdout] >>> referenced by list.rs:51 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-0.25.1/src/types/list.rs:51) [INFO] [stdout] >>> /opt/rustwide/target/debug/deps/microbiorust-27f06eaef6a5a08c.microbiorust.3f7329a77fb376df-cgu.3.rcgu.o:(pyo3::types::list::try_new_from_iter::<&mut core::iter::adapters::map::Map, ::owned_sequence_into_pyobject>::{closure#0}>>::{closure#0}) [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: _Py_NoneStruct [INFO] [stdout] >>> referenced by object.rs:622 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-ffi-0.25.1/src/object.rs:622) [INFO] [stdout] >>> /opt/rustwide/target/debug/deps/microbiorust-27f06eaef6a5a08c.microbiorust.3f7329a77fb376df-cgu.1.rcgu.o:(pyo3_ffi::object::Py_None) [INFO] [stdout] >>> referenced by object.rs:622 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-ffi-0.25.1/src/object.rs:622) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.08.rcgu.o:(pyo3_ffi::object::Py_None) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyExc_IOError [INFO] [stdout] >>> referenced by exceptions.rs:282 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-0.25.1/src/exceptions.rs:282) [INFO] [stdout] >>> /opt/rustwide/target/debug/deps/microbiorust-27f06eaef6a5a08c.microbiorust.3f7329a77fb376df-cgu.6.rcgu.o:(::type_object_raw::{closure#0}) [INFO] [stdout] >>> referenced by exceptions.rs:282 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-0.25.1/src/exceptions.rs:282) [INFO] [stdout] >>> /opt/rustwide/target/debug/deps/microbiorust-27f06eaef6a5a08c.microbiorust.3f7329a77fb376df-cgu.6.rcgu.o:(::type_object_raw::{closure#0}) [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyGILState_Ensure [INFO] [stdout] >>> referenced by pystate.rs:138 (src/pystate.rs:138) [INFO] [stdout] >>> pyo3_ffi-1f9a3cf0e5e9da51.pyo3_ffi.3b1fa299276c46af-cgu.0.rcgu.o:(pyo3_ffi::pystate::PyGILState_Ensure) in archive /opt/rustwide/target/debug/deps/libpyo3_ffi-1f9a3cf0e5e9da51.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: Py_IsInitialized [INFO] [stdout] >>> referenced by gil.rs:184 (src/gil.rs:184) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::acquire::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by gil.rs:68 (src/gil.rs:68) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(pyo3::gil::prepare_freethreaded_python::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: Py_InitializeEx [INFO] [stdout] >>> referenced by gil.rs:69 (src/gil.rs:69) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(pyo3::gil::prepare_freethreaded_python::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyEval_SaveThread [INFO] [stdout] >>> referenced by gil.rs:72 (src/gil.rs:72) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(pyo3::gil::prepare_freethreaded_python::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by gil.rs:304 (src/gil.rs:304) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::new) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyExc_OverflowError [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyExc_ValueError [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyExc_BaseException [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyExc_TypeError [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyExc_AttributeError [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by exceptions.rs:282 (src/exceptions.rs:282) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::type_object_raw::{closure#0}) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: _Py_DecRef [INFO] [stdout] >>> referenced by refcount.rs:266 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-ffi-0.25.1/src/refcount.rs:266) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::update_counts) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by refcount.rs:266 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-ffi-0.25.1/src/refcount.rs:266) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(pyo3::gil::register_decref) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by refcount.rs:266 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-ffi-0.25.1/src/refcount.rs:266) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.00.rcgu.o:( as core::ops::drop::Drop>::drop) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced 11 more times [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyException_GetTraceback [INFO] [stdout] >>> referenced by err_state.rs:152 (src/err/err_state.rs:152) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::new) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyErr_Fetch [INFO] [stdout] >>> referenced by err_state.rs:205 (src/err/err_state.rs:205) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::take) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by err_state.rs:340 (src/err/err_state.rs:340) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(pyo3::err::err_state::lazy_into_normalized_ffi_tuple) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyErr_NormalizeException [INFO] [stdout] >>> referenced by err_state.rs:209 (src/err/err_state.rs:209) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::take) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] >>> referenced by err_state.rs:341 (src/err/err_state.rs:341) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(pyo3::err::err_state::lazy_into_normalized_ffi_tuple) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyErr_Restore [INFO] [stdout] >>> referenced by err_state.rs:314 (src/err/err_state.rs:314) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(::restore) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: PyBool_Type [INFO] [stdout] >>> referenced by boolobject.rs:9 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-ffi-0.25.1/src/boolobject.rs:9) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(pyo3_ffi::boolobject::PyBool_Check) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: undefined symbol: _Py_TrueStruct [INFO] [stdout] >>> referenced by boolobject.rs:41 (/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-ffi-0.25.1/src/boolobject.rs:41) [INFO] [stdout] >>> pyo3-50c2f1782a8a9460.pyo3.d73286d16ad212d1-cgu.14.rcgu.o:(pyo3_ffi::boolobject::Py_True) in archive /opt/rustwide/target/debug/deps/libpyo3-50c2f1782a8a9460.rlib [INFO] [stdout] [INFO] [stdout] rust-lld: error: too many errors emitted, stopping now (use --error-limit=0 to see all errors) [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `microbiorust-py` (lib test) due to 1 previous error [INFO] running `Command { std: "docker" "inspect" "4a8b74a4b1311626aa7982c0fca188d59d8c0ff88ea1e00c48d2d34cdfc263fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4a8b74a4b1311626aa7982c0fca188d59d8c0ff88ea1e00c48d2d34cdfc263fd", kill_on_drop: false }` [INFO] [stdout] 4a8b74a4b1311626aa7982c0fca188d59d8c0ff88ea1e00c48d2d34cdfc263fd