[INFO] fetching crate exon-sam 0.32.4... [INFO] testing exon-sam-0.32.4 against try#dec9417b8611e34e787a3e4c37686b5131f9e5c5 for pr-154210-1 [INFO] extracting crate exon-sam 0.32.4 into /workspace/builds/worker-5-tc2/source [INFO] started tweaking crates.io crate exon-sam 0.32.4 [INFO] finished tweaking crates.io crate exon-sam 0.32.4 [INFO] tweaked toml for crates.io crate exon-sam 0.32.4 written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate exon-sam 0.32.4 on toolchain dec9417b8611e34e787a3e4c37686b5131f9e5c5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Locking 305 packages to latest compatible versions [INFO] [stderr] Adding arrow v53.4.1 (available: v58.1.0) [INFO] [stderr] Adding async-compression v0.4.19 (available: v0.4.41) [INFO] [stderr] Adding chrono v0.4.39 (available: v0.4.44) [INFO] [stderr] Adding generic-array v0.14.7 (available: v0.14.9) [INFO] [stderr] Adding noodles v0.86.0 (available: v0.109.0) [INFO] [stderr] Adding object_store v0.11.2 (available: v0.13.2) [INFO] [stderr] Adding zstd-safe v7.2.1 (available: v7.2.4) [INFO] [stderr] Adding zstd-sys v2.0.13+zstd.1.5.6 (available: v2.0.16+zstd.1.5.7) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3e81f4173d26af46e27930a48c599b47cb99e4d875a18cdd5af5fcef4ef49e8b [INFO] running `Command { std: "docker" "start" "-a" "3e81f4173d26af46e27930a48c599b47cb99e4d875a18cdd5af5fcef4ef49e8b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3e81f4173d26af46e27930a48c599b47cb99e4d875a18cdd5af5fcef4ef49e8b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3e81f4173d26af46e27930a48c599b47cb99e4d875a18cdd5af5fcef4ef49e8b", kill_on_drop: false }` [INFO] [stdout] 3e81f4173d26af46e27930a48c599b47cb99e4d875a18cdd5af5fcef4ef49e8b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e7fb1133a05a9b60055b900937a509e8d3218681c7b694b23647cb01bcd7b958 [INFO] running `Command { std: "docker" "start" "-a" "e7fb1133a05a9b60055b900937a509e8d3218681c7b694b23647cb01bcd7b958", kill_on_drop: false }` [INFO] [stderr] Compiling zerocopy v0.8.48 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Compiling chrono-tz v0.10.4 [INFO] [stderr] Compiling lexical-util v1.0.7 [INFO] [stderr] Compiling arrow-schema v53.4.1 [INFO] [stderr] Compiling phf_shared v0.12.1 [INFO] [stderr] Compiling futures-io v0.3.32 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling getrandom v0.3.4 [INFO] [stderr] Compiling adler2 v2.0.1 [INFO] [stderr] Compiling zerocopy-derive v0.8.48 [INFO] [stderr] Compiling tokio-macros v2.7.0 [INFO] [stderr] Compiling futures-macro v0.3.32 [INFO] [stderr] Compiling simd-adler32 v0.3.9 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling unicode-segmentation v1.13.2 [INFO] [stderr] Compiling rustc_version v0.4.1 [INFO] [stderr] Compiling phf v0.12.1 [INFO] [stderr] Compiling zstd-safe v7.2.1 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling parking_lot_core v0.9.12 [INFO] [stderr] Compiling percent-encoding v2.3.2 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling twox-hash v2.1.2 [INFO] [stderr] Compiling cc v1.2.59 [INFO] [stderr] Compiling form_urlencoded v1.2.2 [INFO] [stderr] Compiling snafu-derive v0.8.9 [INFO] [stderr] Compiling lz4_flex v0.11.6 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling snap v1.1.1 [INFO] [stderr] Compiling comfy-table v7.2.2 [INFO] [stderr] Compiling flatbuffers v24.12.23 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling chrono v0.4.39 [INFO] [stderr] Compiling lexical-parse-integer v1.0.6 [INFO] [stderr] Compiling lexical-write-integer v1.0.6 [INFO] [stderr] Compiling tokio v1.51.1 [INFO] [stderr] Compiling futures-util v0.3.32 [INFO] [stderr] Compiling atoi v2.0.0 [INFO] [stderr] Compiling num-bigint v0.4.6 [INFO] [stderr] Compiling num-iter v0.1.45 [INFO] [stderr] Compiling lexical-parse-float v1.0.6 [INFO] [stderr] Compiling flate2 v1.1.9 [INFO] [stderr] Compiling lexical-write-float v1.0.6 [INFO] [stderr] Compiling ordered-float v2.10.1 [INFO] [stderr] Compiling lexical-core v1.0.6 [INFO] [stderr] Compiling url v2.5.8 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling walkdir v2.5.0 [INFO] [stderr] Compiling brotli-decompressor v4.0.3 [INFO] [stderr] Compiling parking_lot v0.12.5 [INFO] [stderr] Compiling async-trait v0.1.89 [INFO] [stderr] Compiling humantime v2.3.0 [INFO] [stderr] Compiling thrift v0.17.0 [INFO] [stderr] Compiling twox-hash v1.6.3 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling num v0.4.3 [INFO] [stderr] Compiling sqlparser_derive v0.2.2 [INFO] [stderr] Compiling getrandom v0.2.17 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling getrandom v0.4.2 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling snafu v0.8.9 [INFO] [stderr] Compiling brotli v7.0.0 [INFO] [stderr] Compiling fastrand v2.4.1 [INFO] [stderr] Compiling sqlparser v0.51.0 [INFO] [stderr] Compiling digest v0.10.7 [INFO] [stderr] Compiling zstd-sys v2.0.13+zstd.1.5.6 [INFO] [stderr] Compiling tempfile v3.27.0 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling blake3 v1.8.4 [INFO] [stderr] Compiling bstr v1.12.1 [INFO] [stderr] Compiling constant_time_eq v0.4.2 [INFO] [stderr] Compiling cpufeatures v0.3.0 [INFO] [stderr] Compiling sha2 v0.10.9 [INFO] [stderr] Compiling md-5 v0.10.6 [INFO] [stderr] Compiling noodles-core v0.15.0 [INFO] [stderr] Compiling blake2 v0.10.6 [INFO] [stderr] Compiling uuid v1.23.0 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling futures-executor v0.3.32 [INFO] [stderr] Compiling strum v0.26.3 [INFO] [stderr] Compiling tokio-util v0.7.18 [INFO] [stderr] Compiling futures v0.3.32 [INFO] [stderr] Compiling datafusion-common-runtime v43.0.0 [INFO] [stderr] Compiling object_store v0.11.2 [INFO] [stderr] Compiling bzip2 v0.5.2 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling noodles-bgzf v0.34.0 [INFO] [stderr] Compiling noodles-csi v0.41.0 [INFO] [stderr] Compiling half v2.7.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling arrow-buffer v53.4.1 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling dashmap v6.1.0 [INFO] [stderr] Compiling noodles-sam v0.67.0 [INFO] [stderr] Compiling arrow-data v53.4.1 [INFO] [stderr] Compiling noodles-bam v0.71.0 [INFO] [stderr] Compiling arrow-array v53.4.1 [INFO] [stderr] Compiling zstd v0.13.3 [INFO] [stderr] Compiling noodles v0.86.0 [INFO] [stderr] Compiling async-compression v0.4.19 [INFO] [stderr] Compiling arrow-select v53.4.1 [INFO] [stderr] Compiling arrow-row v53.4.1 [INFO] [stderr] Compiling arrow-arith v53.4.1 [INFO] [stderr] Compiling arrow-cast v53.4.1 [INFO] [stderr] Compiling arrow-string v53.4.1 [INFO] [stderr] Compiling arrow-ord v53.4.1 [INFO] [stderr] Compiling arrow-ipc v53.4.1 [INFO] [stderr] Compiling arrow-json v53.4.1 [INFO] [stderr] Compiling arrow-csv v53.4.1 [INFO] [stderr] Compiling arrow v53.4.1 [INFO] [stderr] Compiling parquet v53.4.1 [INFO] [stderr] Compiling datafusion-common v43.0.0 [INFO] [stderr] Compiling datafusion-expr-common v43.0.0 [INFO] [stderr] Compiling datafusion-physical-expr-common v43.0.0 [INFO] [stderr] Compiling datafusion-functions-aggregate-common v43.0.0 [INFO] [stderr] Compiling datafusion-functions-window-common v43.0.0 [INFO] [stderr] Compiling datafusion-expr v43.0.0 [INFO] [stderr] Compiling datafusion-physical-expr v43.0.0 [INFO] [stderr] Compiling datafusion-execution v43.0.0 [INFO] [stderr] Compiling datafusion-sql v43.0.0 [INFO] [stderr] Compiling datafusion-functions v43.0.0 [INFO] [stderr] Compiling datafusion-physical-plan v43.0.0 [INFO] [stderr] Compiling datafusion-functions-aggregate v43.0.0 [INFO] [stderr] Compiling datafusion-functions-window v43.0.0 [INFO] [stderr] Compiling datafusion-optimizer v43.0.0 [INFO] [stderr] Compiling datafusion-functions-nested v43.0.0 [INFO] [stderr] Compiling datafusion-physical-optimizer v43.0.0 [INFO] [stderr] Compiling datafusion-catalog v43.0.0 [INFO] [stderr] Compiling datafusion v43.0.0 [INFO] [stderr] Compiling exon-common v0.32.4 [INFO] [stderr] Compiling exon-sam v0.32.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 20s [INFO] running `Command { std: "docker" "inspect" "e7fb1133a05a9b60055b900937a509e8d3218681c7b694b23647cb01bcd7b958", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e7fb1133a05a9b60055b900937a509e8d3218681c7b694b23647cb01bcd7b958", kill_on_drop: false }` [INFO] [stdout] e7fb1133a05a9b60055b900937a509e8d3218681c7b694b23647cb01bcd7b958 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a2345af41bdb4ae289e6450a882591dfe084d0f5555285cba822773801d4c409 [INFO] running `Command { std: "docker" "start" "-a" "a2345af41bdb4ae289e6450a882591dfe084d0f5555285cba822773801d4c409", kill_on_drop: false }` [INFO] [stderr] Compiling exon-sam v0.32.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 7.10s [INFO] running `Command { std: "docker" "inspect" "a2345af41bdb4ae289e6450a882591dfe084d0f5555285cba822773801d4c409", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a2345af41bdb4ae289e6450a882591dfe084d0f5555285cba822773801d4c409", kill_on_drop: false }` [INFO] [stdout] a2345af41bdb4ae289e6450a882591dfe084d0f5555285cba822773801d4c409 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+dec9417b8611e34e787a3e4c37686b5131f9e5c5" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 3ca3e00e1b6db35cca49c32b6f26b0c827872f2205463e8de1076a3a5a11e416 [INFO] running `Command { std: "docker" "start" "-a" "3ca3e00e1b6db35cca49c32b6f26b0c827872f2205463e8de1076a3a5a11e416", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.46s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/exon_sam-884c51245716baa8) [INFO] [stdout] [INFO] [stderr] Doc-tests exon_sam [INFO] [stdout] running 3 tests [INFO] [stdout] test schema_builder::tests::test_build ... ok [INFO] [stdout] test schema_builder::tests::test_build_from_empty_data_errors ... ok [INFO] [stdout] test schema_builder::tests::test_parsing_data ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "3ca3e00e1b6db35cca49c32b6f26b0c827872f2205463e8de1076a3a5a11e416", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3ca3e00e1b6db35cca49c32b6f26b0c827872f2205463e8de1076a3a5a11e416", kill_on_drop: false }` [INFO] [stdout] 3ca3e00e1b6db35cca49c32b6f26b0c827872f2205463e8de1076a3a5a11e416