[INFO] fetching crate umi-tools-rs 1.1.0...
[INFO] testing umi-tools-rs-1.1.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1
[INFO] extracting crate umi-tools-rs 1.1.0 into /workspace/builds/worker-3-tc1/source
[INFO] started tweaking crates.io crate umi-tools-rs 1.1.0
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate umi-tools-rs 1.1.0
[INFO] tweaked toml for crates.io crate umi-tools-rs 1.1.0 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate umi-tools-rs 1.1.0 on toolchain 562dee4820c458d823175268e41601d4c060588a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate umi-tools-rs 1.1.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded umi-core v1.1.0
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded bytecount v0.6.9
[INFO] [stderr]   Downloaded buffer-redux v1.1.0
[INFO] [stderr]   Downloaded bzip2 v0.4.4
[INFO] [stderr]   Downloaded liblzma v0.3.6
[INFO] [stderr]   Downloaded rust-htslib v1.0.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded libz-ng-sys v1.1.23
[INFO] [stderr]   Downloaded needletail v0.6.3
[INFO] [stderr]   Downloaded libz-sys v1.1.23
[INFO] [stderr]   Downloaded liblzma-sys v0.3.13
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] c00449a498926045fa886c3ba513e6d158ec77d2abea1d162583fa38c3ce0894
[INFO] running `Command { std: "docker" "start" "-a" "c00449a498926045fa886c3ba513e6d158ec77d2abea1d162583fa38c3ce0894", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "c00449a498926045fa886c3ba513e6d158ec77d2abea1d162583fa38c3ce0894", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c00449a498926045fa886c3ba513e6d158ec77d2abea1d162583fa38c3ce0894", kill_on_drop: false }`
[INFO] [stdout] c00449a498926045fa886c3ba513e6d158ec77d2abea1d162583fa38c3ce0894
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 33dca66d139a2a914da4d086860e4e477b2c984cebdf09eeeaf475a347fa674d
[INFO] running `Command { std: "docker" "start" "-a" "33dca66d139a2a914da4d086860e4e477b2c984cebdf09eeeaf475a347fa674d", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.8.0
[INFO] [stderr]    Compiling regex-syntax v0.8.9
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling syn v2.0.115
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling bitflags v2.11.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling percent-encoding v2.3.2
[INFO] [stderr]    Compiling cc v1.2.55
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling anstyle-parse v0.2.7
[INFO] [stderr]    Compiling colorchoice v1.0.4
[INFO] [stderr]    Compiling form_urlencoded v1.2.2
[INFO] [stderr]    Compiling buffer-redux v1.1.0
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling byteorder v1.5.0
[INFO] [stderr]    Compiling clap_lex v1.0.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling anstream v0.6.21
[INFO] [stderr]    Compiling bytecount v0.6.9
[INFO] [stderr]    Compiling umi-tools-rs v1.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling clap_builder v4.5.58
[INFO] [stderr]    Compiling cmake v0.1.57
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]    Compiling libz-sys v1.1.23
[INFO] [stderr]    Compiling liblzma-sys v0.3.13
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling libz-ng-sys v1.1.23
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling liblzma v0.3.6
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.8.1
[INFO] [stderr]    Compiling zerovec-derive v0.11.2
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling clap_derive v4.5.55
[INFO] [stderr]    Compiling zerofrom v0.1.6
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling yoke v0.8.1
[INFO] [stderr]    Compiling zerovec v0.11.5
[INFO] [stderr]    Compiling zerotrie v0.2.3
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling clap v4.5.58
[INFO] [stderr]    Compiling zstd v0.13.3
[INFO] [stderr]    Compiling tinystr v0.8.2
[INFO] [stderr]    Compiling potential_utf v0.1.4
[INFO] [stderr]    Compiling icu_collections v2.1.1
[INFO] [stderr]    Compiling icu_locale_core v2.1.1
[INFO] [stderr]    Compiling icu_provider v2.1.1
[INFO] [stderr]    Compiling icu_normalizer v2.1.1
[INFO] [stderr]    Compiling icu_properties v2.1.2
[INFO] [stderr]    Compiling idna_adapter v1.2.1
[INFO] [stderr]    Compiling idna v1.1.0
[INFO] [stderr]    Compiling url v2.5.8
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]    Compiling flate2 v1.1.9
[INFO] [stderr]    Compiling needletail v0.6.3
[INFO] [stderr]    Compiling rust-htslib v1.0.0
[INFO] [stderr]    Compiling umi-core v1.1.0
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 53.82s
[INFO] running `Command { std: "docker" "inspect" "33dca66d139a2a914da4d086860e4e477b2c984cebdf09eeeaf475a347fa674d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "33dca66d139a2a914da4d086860e4e477b2c984cebdf09eeeaf475a347fa674d", kill_on_drop: false }`
[INFO] [stdout] 33dca66d139a2a914da4d086860e4e477b2c984cebdf09eeeaf475a347fa674d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] dbfacefc75ce811762263d35f1cb7b515baf854b8683fb7cb7d9fed3a36092ec
[INFO] running `Command { std: "docker" "start" "-a" "dbfacefc75ce811762263d35f1cb7b515baf854b8683fb7cb7d9fed3a36092ec", kill_on_drop: false }`
[INFO] [stderr]    Compiling umi-tools-rs v1.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.67s
[INFO] running `Command { std: "docker" "inspect" "dbfacefc75ce811762263d35f1cb7b515baf854b8683fb7cb7d9fed3a36092ec", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dbfacefc75ce811762263d35f1cb7b515baf854b8683fb7cb7d9fed3a36092ec", kill_on_drop: false }`
[INFO] [stdout] dbfacefc75ce811762263d35f1cb7b515baf854b8683fb7cb7d9fed3a36092ec
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 7063d4c350681d573f54d7966a7b111ec26474e91f1c1634e44ff762bcc8511e
[INFO] running `Command { std: "docker" "start" "-a" "7063d4c350681d573f54d7966a7b111ec26474e91f1c1634e44ff762bcc8511e", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/umi_tools_rs-82d84040b731d073)
[INFO] [stdout] 
[INFO] [stderr]      Running tests/extract_integration.rs (/opt/rustwide/target/debug/deps/extract_integration-bba4d932ba26346b)
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test extract_string_matches_umi_tools_reference ... ok
[INFO] [stdout] test extract_regex_matches_string_method ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.26s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "7063d4c350681d573f54d7966a7b111ec26474e91f1c1634e44ff762bcc8511e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7063d4c350681d573f54d7966a7b111ec26474e91f1c1634e44ff762bcc8511e", kill_on_drop: false }`
[INFO] [stdout] 7063d4c350681d573f54d7966a7b111ec26474e91f1c1634e44ff762bcc8511e