[INFO] fetching crate sketchlib 0.2.4... [INFO] testing sketchlib-0.2.4 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate sketchlib 0.2.4 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate sketchlib 0.2.4 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate sketchlib 0.2.4 [INFO] tweaked toml for crates.io crate sketchlib 0.2.4 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate sketchlib 0.2.4 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate sketchlib 0.2.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded snapbox-macros v0.3.10 [INFO] [stderr] Downloaded simple_logger v4.3.3 [INFO] [stderr] Downloaded libz-rs-sys v0.5.1 [INFO] [stderr] Downloaded proc-macro2 v1.0.97 [INFO] [stderr] Downloaded assert_fs v1.1.3 [INFO] [stderr] Downloaded globset v0.4.16 [INFO] [stderr] Downloaded anyhow v1.0.99 [INFO] [stderr] Downloaded clap v4.5.45 [INFO] [stderr] Downloaded cc v1.2.32 [INFO] [stderr] Downloaded snapbox v0.6.21 [INFO] [stderr] Downloaded ignore v0.4.23 [INFO] [stderr] Downloaded zlib-rs v0.5.1 [INFO] [stderr] Downloaded clap_builder v4.5.44 [INFO] [stderr] Downloaded memmap2 v0.9.7 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded clap_derive v4.5.45 [INFO] [stderr] Downloaded buffer-redux v1.0.2 [INFO] [stderr] Downloaded syn v2.0.105 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e28facb53d3f1e35733924317249f2f8f93bd789054132f49637ca714cdee511 [INFO] running `Command { std: "docker" "start" "-a" "e28facb53d3f1e35733924317249f2f8f93bd789054132f49637ca714cdee511", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e28facb53d3f1e35733924317249f2f8f93bd789054132f49637ca714cdee511", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e28facb53d3f1e35733924317249f2f8f93bd789054132f49637ca714cdee511", kill_on_drop: false }` [INFO] [stdout] e28facb53d3f1e35733924317249f2f8f93bd789054132f49637ca714cdee511 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 8c9b4b80ad3cb6dc7ec1772f8d1f7412b6fcb8a90b981d5825b015d9bf6f04fa [INFO] running `Command { std: "docker" "start" "-a" "8c9b4b80ad3cb6dc7ec1772f8d1f7412b6fcb8a90b981d5825b015d9bf6f04fa", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.97 [INFO] [stderr] Compiling memchr v2.7.5 [INFO] [stderr] Compiling zerocopy v0.8.26 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling cc v1.2.32 [INFO] [stderr] Compiling is_terminal_polyfill v1.70.1 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Compiling num-conv v0.1.0 [INFO] [stderr] Compiling time-core v0.1.4 [INFO] [stderr] Compiling portable-atomic v1.11.1 [INFO] [stderr] Compiling zlib-rs v0.5.1 [INFO] [stderr] Compiling anstyle-query v1.1.4 [INFO] [stderr] Compiling deranged v0.4.0 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling snap v1.1.1 [INFO] [stderr] Compiling anyhow v1.0.99 [INFO] [stderr] Compiling anstream v0.6.20 [INFO] [stderr] Compiling num_threads v0.1.7 [INFO] [stderr] Compiling time-macros v0.2.22 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling console v0.15.11 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling clap_builder v4.5.44 [INFO] [stderr] Compiling rmp v0.8.14 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling syn v2.0.105 [INFO] [stderr] Compiling unicode-segmentation v1.12.0 [INFO] [stderr] Compiling bytemuck v1.23.2 [INFO] [stderr] Compiling allocator-api2 v0.2.21 [INFO] [stderr] Compiling memmap2 v0.9.7 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling time v0.3.41 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling clap_derive v4.5.45 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling libz-rs-sys v0.5.1 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling clap v4.5.45 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling rmp-serde v1.3.0 [INFO] [stderr] Compiling ciborium v0.2.2 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling roaring v0.10.12 [INFO] [stderr] Compiling sketchlib v0.2.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 33.83s [INFO] running `Command { std: "docker" "inspect" "8c9b4b80ad3cb6dc7ec1772f8d1f7412b6fcb8a90b981d5825b015d9bf6f04fa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8c9b4b80ad3cb6dc7ec1772f8d1f7412b6fcb8a90b981d5825b015d9bf6f04fa", kill_on_drop: false }` [INFO] [stdout] 8c9b4b80ad3cb6dc7ec1772f8d1f7412b6fcb8a90b981d5825b015d9bf6f04fa [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 81988ece8593a2fea8eefd2bda1d8f47a13fe5956487bc97e6efddf953031992 [INFO] running `Command { std: "docker" "start" "-a" "81988ece8593a2fea8eefd2bda1d8f47a13fe5956487bc97e6efddf953031992", kill_on_drop: false }` [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling bstr v1.12.0 [INFO] [stderr] Compiling predicates-core v1.0.9 [INFO] [stderr] Compiling bitflags v2.9.1 [INFO] [stderr] Compiling rustix v1.0.8 [INFO] [stderr] Compiling linux-raw-sys v0.9.4 [INFO] [stderr] Compiling difflib v0.4.0 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling termtree v0.5.1 [INFO] [stderr] Compiling normalize-line-endings v0.3.0 [INFO] [stderr] Compiling float-cmp v0.9.0 [INFO] [stderr] Compiling snapbox-macros v0.3.10 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling snapbox v0.6.21 [INFO] [stderr] Compiling predicates-tree v1.0.12 [INFO] [stderr] Compiling predicates v3.1.3 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling tempfile v3.20.0 [INFO] [stderr] Compiling globset v0.4.16 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling ignore v0.4.23 [INFO] [stderr] Compiling predicates v2.1.5 [INFO] [stderr] Compiling sketchlib v0.2.4 (/opt/rustwide/workdir) [INFO] [stderr] Compiling globwalk v0.9.1 [INFO] [stderr] Compiling assert_fs v1.1.3 [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 20.96s [INFO] running `Command { std: "docker" "inspect" "81988ece8593a2fea8eefd2bda1d8f47a13fe5956487bc97e6efddf953031992", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "81988ece8593a2fea8eefd2bda1d8f47a13fe5956487bc97e6efddf953031992", kill_on_drop: false }` [INFO] [stdout] 81988ece8593a2fea8eefd2bda1d8f47a13fe5956487bc97e6efddf953031992 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] b4080b2319091dfda31b4238aaf6f816fe9285243424b7f4f08b8c613b0c0c72 [INFO] running `Command { std: "docker" "start" "-a" "b4080b2319091dfda31b4238aaf6f816fe9285243424b7f4f08b8c613b0c0c72", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.24s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/sketchlib-7b782049e1b0ea65) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test io::test_reorder_input_files ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/sketchlib-d5e34c5353e8ef72) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/completeness.rs (/opt/rustwide/target/debug/deps/completeness-086411a86b0d4e84) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test tests::test_completeness_extra_genomes ... ok [INFO] [stdout] test tests::test_completeness_correction_formula_exact ... ok [INFO] [stdout] test tests::test_completeness_ordering ... ok [INFO] [stdout] test tests::test_completeness_missing_genomes ... ok [INFO] [stderr] Running tests/concat.rs (/opt/rustwide/target/debug/deps/concat-91e4ebf395487479) [INFO] [stdout] test tests::test_completeness_precluster ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.06s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_concat_sketches ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 6.68s [INFO] [stdout] [INFO] [stderr] Running tests/delete.rs (/opt/rustwide/target/debug/deps/delete-01ada159c2e3b245) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_delete_sketches ... ok [INFO] [stderr] Running tests/distance.rs (/opt/rustwide/target/debug/deps/distance-3cf552b208469dd2) [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.70s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test tests::dense_distances ... ok [INFO] [stdout] test tests::knn_dists ... ok [INFO] [stdout] test tests::subset_dists ... ok [INFO] [stderr] Running tests/inverted.rs (/opt/rustwide/target/debug/deps/inverted-e3e4457591bbc2af) [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 10.77s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test tests::inverted_sketch ... ok [INFO] [stdout] test tests::inverted_reorder ... ok [INFO] [stdout] test tests::inverted_precluster ... ok [INFO] [stdout] test tests::inverted_query ... ok [INFO] [stderr] Running tests/merge.rs (/opt/rustwide/target/debug/deps/merge-fdae0fdd4c52d080) [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 10.25s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test tests::test_is_compatible_with ... ok [INFO] [stderr] Running tests/sketch.rs (/opt/rustwide/target/debug/deps/sketch-9f1b76174fb5d753) [INFO] [stdout] test tests::test_merge_sketches ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.39s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test tests::sketch_fastq ... ok [INFO] [stdout] test tests::sketch_fasta ... ok [INFO] [stdout] test tests::legacy_databases ... ok [INFO] [stderr] Doc-tests sketchlib [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.18s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "b4080b2319091dfda31b4238aaf6f816fe9285243424b7f4f08b8c613b0c0c72", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b4080b2319091dfda31b4238aaf6f816fe9285243424b7f4f08b8c613b0c0c72", kill_on_drop: false }` [INFO] [stdout] b4080b2319091dfda31b4238aaf6f816fe9285243424b7f4f08b8c613b0c0c72