[INFO] fetching crate sequintools 0.11.1... [INFO] testing sequintools-0.11.1 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate sequintools 0.11.1 into /workspace/builds/worker-4-tc1/source [INFO] removed /workspace/builds/worker-4-tc1/source/rust-toolchain.toml [INFO] started tweaking crates.io crate sequintools 0.11.1 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate sequintools 0.11.1 [INFO] tweaked toml for crates.io crate sequintools 0.11.1 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate sequintools 0.11.1 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate sequintools 0.11.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded cmake v0.1.54 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded rand_pcg v0.9.0 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded cc v1.2.44 [INFO] [stderr] Downloaded clap v4.5.56 [INFO] [stderr] Downloaded rust-htslib v1.0.0 [INFO] [stderr] Downloaded clap_builder v4.5.56 [INFO] [stderr] Downloaded bindgen v0.69.5 [INFO] [stderr] Downloaded libz-sys v1.1.22 [INFO] [stderr] Downloaded curl-sys v0.4.83+curl-8.15.0 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] [stderr] Downloaded openssl-src v300.5.4+3.5.4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 0587204f2eb590c2da56f2cc059da4cb6d62193730e0fedb56e1a4a95fe4c35e [INFO] running `Command { std: "docker" "start" "-a" "0587204f2eb590c2da56f2cc059da4cb6d62193730e0fedb56e1a4a95fe4c35e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "0587204f2eb590c2da56f2cc059da4cb6d62193730e0fedb56e1a4a95fe4c35e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0587204f2eb590c2da56f2cc059da4cb6d62193730e0fedb56e1a4a95fe4c35e", kill_on_drop: false }` [INFO] [stdout] 0587204f2eb590c2da56f2cc059da4cb6d62193730e0fedb56e1a4a95fe4c35e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 267919a44514e22bbb36312aa4746c069696ddcd4a4ce6f1c6a53d809fe8c8b1 [INFO] running `Command { std: "docker" "start" "-a" "267919a44514e22bbb36312aa4746c069696ddcd4a4ce6f1c6a53d809fe8c8b1", kill_on_drop: false }` [INFO] [stderr] Compiling quote v1.0.41 [INFO] [stderr] Compiling find-msvc-tools v0.1.4 [INFO] [stderr] Compiling glob v0.3.3 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.8.8 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling icu_properties_data v2.1.1 [INFO] [stderr] Compiling libloading v0.8.9 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling cc v1.2.44 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling syn v2.0.108 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling smallvec v1.15.1 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling zerocopy v0.8.27 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling bitflags v2.10.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling openssl-src v300.5.4+3.5.4 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling regex-automata v0.4.13 [INFO] [stderr] Compiling openssl-sys v0.9.110 [INFO] [stderr] Compiling libz-sys v1.1.22 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling curl-sys v0.4.83+curl-8.15.0 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling regex v1.12.2 [INFO] [stderr] Compiling getrandom v0.3.4 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling rand_core v0.9.3 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Compiling anstyle-query v1.1.4 [INFO] [stderr] Compiling percent-encoding v2.3.2 [INFO] [stderr] Compiling anstream v0.6.21 [INFO] [stderr] Compiling form_urlencoded v1.2.2 [INFO] [stderr] Compiling crossbeam-deque v0.8.6 [INFO] [stderr] Compiling clap_builder v4.5.56 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling rand_chacha v0.9.0 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.8.1 [INFO] [stderr] Compiling zerovec-derive v0.11.2 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling yoke v0.8.1 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling zerovec v0.11.5 [INFO] [stderr] Compiling zerotrie v0.2.3 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling tinystr v0.8.2 [INFO] [stderr] Compiling potential_utf v0.1.4 [INFO] [stderr] Compiling icu_collections v2.1.1 [INFO] [stderr] Compiling icu_locale_core v2.1.1 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Compiling icu_provider v2.1.1 [INFO] [stderr] Compiling icu_normalizer v2.1.1 [INFO] [stderr] Compiling icu_properties v2.1.1 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling clap_derive v4.5.55 [INFO] [stderr] Compiling sequintools v0.11.1 (/opt/rustwide/workdir) [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling rand v0.9.2 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling rayon v1.11.0 [INFO] [stderr] Compiling rand_pcg v0.9.0 [INFO] [stderr] Compiling idna_adapter v1.2.1 [INFO] [stderr] Compiling idna v1.1.0 [INFO] [stderr] Compiling clap v4.5.56 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling url v2.5.7 [INFO] [stderr] Compiling rust-htslib v1.0.0 [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 6m 13s [INFO] running `Command { std: "docker" "inspect" "267919a44514e22bbb36312aa4746c069696ddcd4a4ce6f1c6a53d809fe8c8b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "267919a44514e22bbb36312aa4746c069696ddcd4a4ce6f1c6a53d809fe8c8b1", kill_on_drop: false }` [INFO] [stdout] 267919a44514e22bbb36312aa4746c069696ddcd4a4ce6f1c6a53d809fe8c8b1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c8241b68c4ae7832bf9406a55e00d08652833c566097370e47b0ed5f40917e64 [INFO] running `Command { std: "docker" "start" "-a" "c8241b68c4ae7832bf9406a55e00d08652833c566097370e47b0ed5f40917e64", kill_on_drop: false }` [INFO] [stderr] Compiling rustix v1.1.3 [INFO] [stderr] Compiling once_cell v1.21.3 [INFO] [stderr] Compiling md5 v0.8.0 [INFO] [stderr] Compiling tempfile v3.24.0 [INFO] [stderr] Compiling sequintools v0.11.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 8.04s [INFO] running `Command { std: "docker" "inspect" "c8241b68c4ae7832bf9406a55e00d08652833c566097370e47b0ed5f40917e64", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c8241b68c4ae7832bf9406a55e00d08652833c566097370e47b0ed5f40917e64", kill_on_drop: false }` [INFO] [stdout] c8241b68c4ae7832bf9406a55e00d08652833c566097370e47b0ed5f40917e64 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 352db213af1972138c0b084cc6b408d7968fa81e881e57dc3c9b3fa34e10649a [INFO] running `Command { std: "docker" "start" "-a" "352db213af1972138c0b084cc6b408d7968fa81e881e57dc3c9b3fa34e10649a", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.25s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/sequintools-93176a08877decfd) [INFO] [stdout] [INFO] [stdout] running 64 tests [INFO] [stdout] test bam::tests::test_bam_writer_trait_methods ... ok [INFO] [stdout] test bam::tests::test_bam_reader_trait_methods ... ok [INFO] [stdout] test bam::tests::test_example_function_with_mock ... ok [INFO] [stdout] test bam::tests::test_example_function_with_mock_writer ... ok [INFO] [stdout] test bam::tests::test_htslib_bam_reader_creation_non_existant ... ok [INFO] [stdout] test bam::tests::test_mock_bam_reader_empty_header_records ... ok [INFO] [stdout] test bam::tests::test_mock_bam_reader_iterator_behavior ... ok [INFO] [stderr] [E::hts_open_format] Failed to open file "output.bam" : Read-only file system [INFO] [stdout] test bam::tests::test_mock_bam_reader_multiple_iterations ... ok [INFO] [stdout] test bam::tests::test_mock_bam_reader_methods_dont_error ... ok [INFO] [stdout] test bam::tests::test_mock_bam_reader_with_custom_header ... ok [INFO] [stdout] test bam::tests::test_mock_bam_reader_with_records ... ok [INFO] [stdout] test bam::tests::test_mock_bam_writer_basic ... ok [INFO] [stdout] test bam::tests::test_mock_bam_writer_clear ... ok [INFO] [stdout] test bam::tests::test_mock_bam_writer_default ... ok [INFO] [stdout] test bam::tests::test_mock_bam_writer_methods_dont_error ... ok [INFO] [stdout] test bam::tests::test_mock_bam_writer_multiple_writes ... ok [INFO] [stdout] test calibration::tests::test_calibrate_by_sample_profile ... ok [INFO] [stdout] test calibration::tests::test_calibrate_empty_target_regions ... ok [INFO] [stderr] [E::hts_open_format] Failed to open file "nonexistent/path.bam" : No such file or directory [INFO] [stdout] test calibration::tests::test_calibrate_fixed_coverage_mode ... ok [INFO] [stdout] test calibration::tests::test_calibrate_by_fixed_coverage ... ok [INFO] [stdout] test calibration::tests::test_calibrate_fixed_coverage_mode_different_chromosomes ... ok [INFO] [stdout] test bam::tests::test_htslib_bam_writer_creation_non_existant ... ok [INFO] [stdout] test bam::tests::test_mock_bam_reader_basic ... ok [INFO] [stdout] test calibration::tests::test_calibrate_regions ... ok [INFO] [stdout] test calibration::tests::test_calibrate_regions_missing_sample ... ok [INFO] [stdout] test calibration::tests::test_calibrate_sample_mean_coverage_mode ... ok [INFO] [stdout] test calibration::tests::test_calibrate_sample_profile_mode ... ok [INFO] [stdout] test calibration::tests::test_choose_from ... ok [INFO] [stdout] test calibration::tests::test_choose_from_sample_too_large ... ok [INFO] [stdout] test calibration::tests::test_choose_from_zero_sample ... ok [INFO] [stdout] test calibration::tests::test_determine_downsampling_probabilities_fixed_coverage ... ok [INFO] [stdout] test calibration::tests::test_determine_downsampling_probabilities_fixed_coverage_too_low ... ok [INFO] [stdout] test calibration::tests::test_determine_downsampling_probabilities_with_sample_regions ... ok [INFO] [stdout] test calibration::tests::test_determine_downsampling_probabilities_zero_coverage ... ok [INFO] [stdout] test calibration::tests::test_records_that_start_in_region ... ok [INFO] [stdout] test calibration::tests::test_starts_in_with_min_mapq ... ok [INFO] [stdout] test calibration::tests::test_subsample ... ok [INFO] [stdout] test calibration::tests::test_subsample_duplicate_read ... ok [INFO] [stdout] test calibration::tests::test_window_starts ... ok [INFO] [stdout] test calibration::tests::test_regions_coverage ... ok [INFO] [stdout] test calibration::tests::test_regions_coverage_empty_regions ... ok [INFO] [stdout] test calibration::tests::test_starts_in ... ok [INFO] [stdout] test calibration::tests::test_records_that_start_in_region_empty ... ok [INFO] [stdout] test coverage::tests::test_coverage_for_region_flank_overflow ... ok [INFO] [stdout] test bam::tests::test_mock_bam_reader_header_access ... ok [INFO] [stdout] test coverage::tests::test_coverage_for_region ... ok [INFO] [stdout] test coverage::tests::test_coverage_for_region_empty ... ok [INFO] [stdout] test coverage::tests::test_coverage_for_region_flank_bigger_than_region ... ok [INFO] [stdout] test coverage::tests::test_coverage_for_region_flank_underflow ... ok [INFO] [stdout] test coverage::tests::test_coverage_for_region_missing_chrom ... ok [INFO] [stdout] test coverage::tests::test_write_csv_with_thresholds ... ok [INFO] [stdout] test coverage::tests::test_write_csv ... ok [INFO] [stdout] test coverage::tests::test_write_csv_no_coverage ... ok [INFO] [stdout] test region::tests::display_region ... ok [INFO] [stdout] test region::tests::load_bed_to_vec ... ok [INFO] [stdout] test region::tests::load_invalid_reader ... ok [INFO] [stdout] test region::tests::load_with_bad_end ... ok [INFO] [stdout] test region::tests::load_with_bad_start ... ok [INFO] [stdout] test region::tests::load_multi_lines_bed ... ok [INFO] [stdout] test region::tests::load_without_name ... ok [INFO] [stdout] test coverage::tests::test_calculate_coverage ... ok [INFO] [stdout] test bam::tests::test_htslib_bam_reader ... ok [INFO] [stdout] test coverage::tests::test_coverage_for_region_skip_reads ... ok [INFO] [stdout] test bam::tests::test_htslib_bam_writer_creation ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- bam::tests::test_htslib_bam_writer_creation stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'bam::tests::test_htslib_bam_writer_creation' (23) panicked at src/bam.rs:784:9: [INFO] [stdout] assertion failed: result.is_ok() [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x579e9e3a12ca - std[31e582c13f4e914f]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x579e9e3a12ca - std[31e582c13f4e914f]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x579e9e3a12ca - std[31e582c13f4e914f]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x579e9e3a12ca - <::print::DisplayBacktrace as core[fa0eadad68403074]::fmt::Display>::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x579e9e3b63fa - ::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x579e9e3b63fa - core[fa0eadad68403074]::fmt::write [INFO] [stdout] 6: 0x579e9e3a5c72 - std[31e582c13f4e914f]::io::default_write_fmt::> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x579e9e3a5c72 - as std[31e582c13f4e914f]::io::Write>::write_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x579e9e37ffaf - ::print [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:47:9 [INFO] [stdout] 9: 0x579e9e37ffaf - std[31e582c13f4e914f]::panicking::default_hook::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:292:27 [INFO] [stdout] 10: 0x579e9e399769 - std[31e582c13f4e914f]::panicking::default_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:316:9 [INFO] [stdout] 11: 0x579e9de516ec - core[fa0eadad68403074]::ops::function::Fn<(&'a std[31e582c13f4e914f]::panic::PanicHookInfo<'b>,), Output = ()> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::Fn<(&std[31e582c13f4e914f]::panic::PanicHookInfo,)>>::call [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2254:9 [INFO] [stdout] 12: 0x579e9de516ec - test[7530e63dc052480e]::test_main_with_exit_callback::::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x579e9e3999e2 - core[fa0eadad68403074]::ops::function::Fn<(&'a std[31e582c13f4e914f]::panic::PanicHookInfo<'b>,), Output = ()> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::Fn<(&std[31e582c13f4e914f]::panic::PanicHookInfo,)>>::call [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2254:9 [INFO] [stdout] 14: 0x579e9e3999e2 - std[31e582c13f4e914f]::panicking::panic_with_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:833:13 [INFO] [stdout] 15: 0x579e9e38009a - std[31e582c13f4e914f]::panicking::panic_handler::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:691:13 [INFO] [stdout] 16: 0x579e9e375249 - std[31e582c13f4e914f]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:182:18 [INFO] [stdout] 17: 0x579e9e380d7d - __rustc[fc8e3a9f23f26cb]::rust_begin_unwind [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:689:5 [INFO] [stdout] 18: 0x579e9e3b6b8c - core[fa0eadad68403074]::panicking::panic_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x579e9e3b6b52 - core[fa0eadad68403074]::panicking::panic [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panicking.rs:150:5 [INFO] [stdout] 20: 0x579e9ddfe42a - sequintools[b1bd7b1b8af61d1a]::bam::tests::test_htslib_bam_writer_creation [INFO] [stdout] at /opt/rustwide/workdir/src/bam.rs:784:9 [INFO] [stdout] 21: 0x579e9ddfc607 - sequintools[b1bd7b1b8af61d1a]::bam::tests::test_htslib_bam_writer_creation::{closure#0} [INFO] [stdout] at /opt/rustwide/workdir/src/bam.rs:780:41 [INFO] [stdout] 22: 0x579e9de2f126 - >::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 23: 0x579e9de457cb - core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x579e9de457cb - test[7530e63dc052480e]::__rust_begin_short_backtrace::, fn() -> core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:663:18 [INFO] [stdout] 25: 0x579e9de521bb - test[7530e63dc052480e]::run_test_in_process::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:686:74 [INFO] [stdout] 26: 0x579e9de521bb - as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panic/unwind_safe.rs:275:9 [INFO] [stdout] 27: 0x579e9de521bb - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::, core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 28: 0x579e9de521bb - std[31e582c13f4e914f]::panicking::catch_unwind::, core[fa0eadad68403074]::panic::unwind_safe::AssertUnwindSafe> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 29: 0x579e9de521bb - std[31e582c13f4e914f]::panic::catch_unwind::, core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 30: 0x579e9de521bb - test[7530e63dc052480e]::run_test_in_process [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:686:27 [INFO] [stdout] 31: 0x579e9de521bb - test[7530e63dc052480e]::run_test::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:607:43 [INFO] [stdout] 32: 0x579e9de4c614 - test[7530e63dc052480e]::run_test::{closure#1} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:637:41 [INFO] [stdout] 33: 0x579e9de4c614 - std[31e582c13f4e914f]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:166:18 [INFO] [stdout] 34: 0x579e9de54dc2 - std[31e582c13f4e914f]::thread::lifecycle::spawn_unchecked::::{closure#1}::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/thread/lifecycle.rs:91:13 [INFO] [stdout] 35: 0x579e9de54dc2 - ::{closure#1}::{closure#0}> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panic/unwind_safe.rs:275:9 [INFO] [stdout] 36: 0x579e9de54dc2 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::::{closure#1}::{closure#0}>, ()> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 37: 0x579e9de54dc2 - std[31e582c13f4e914f]::panicking::catch_unwind::<(), core[fa0eadad68403074]::panic::unwind_safe::AssertUnwindSafe::{closure#1}::{closure#0}>> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 38: 0x579e9de54dc2 - std[31e582c13f4e914f]::panic::catch_unwind::::{closure#1}::{closure#0}>, ()> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 39: 0x579e9de54dc2 - std[31e582c13f4e914f]::thread::lifecycle::spawn_unchecked::::{closure#1} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/thread/lifecycle.rs:89:26 [INFO] [stdout] 40: 0x579e9de54dc2 - ::{closure#1} as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 41: 0x579e9e3a0bcf - + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2240:9 [INFO] [stdout] 42: 0x579e9e3a0bcf - ::new::thread_start [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/thread/unix.rs:118:17 [INFO] [stdout] 43: 0x7d7c267e5aa4 - [INFO] [stdout] 44: 0x7d7c26872a64 - clone [INFO] [stdout] 45: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] bam::tests::test_htslib_bam_writer_creation [INFO] [stdout] [INFO] [stdout] test result: FAILED. 63 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.11s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "352db213af1972138c0b084cc6b408d7968fa81e881e57dc3c9b3fa34e10649a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "352db213af1972138c0b084cc6b408d7968fa81e881e57dc3c9b3fa34e10649a", kill_on_drop: false }` [INFO] [stdout] 352db213af1972138c0b084cc6b408d7968fa81e881e57dc3c9b3fa34e10649a