[INFO] fetching crate seqrepo 0.10.3... [INFO] testing seqrepo-0.10.3 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate seqrepo 0.10.3 into /workspace/builds/worker-0-tc1/source [INFO] started tweaking crates.io crate seqrepo 0.10.3 [INFO] finished tweaking crates.io crate seqrepo 0.10.3 [INFO] tweaked toml for crates.io crate seqrepo 0.10.3 written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate seqrepo 0.10.3 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate seqrepo 0.10.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded test-log v0.2.16 [INFO] [stderr] Downloaded textwrap v0.16.1 [INFO] [stderr] Downloaded noodles v0.76.0 [INFO] [stderr] Downloaded temp_testdir v0.2.3 [INFO] [stderr] Downloaded test-log-macros v0.2.16 [INFO] [stderr] Downloaded clap_lex v0.7.1 [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] [stderr] Downloaded env_logger v0.11.4 [INFO] [stderr] Downloaded anstyle-query v1.1.0 [INFO] [stderr] Downloaded clap_derive v4.5.8 [INFO] [stderr] Downloaded noodles-bgzf v0.30.0 [INFO] [stderr] Downloaded pretty_assertions v1.4.0 [INFO] [stderr] Downloaded cc v1.1.6 [INFO] [stderr] Downloaded flate2 v1.0.30 [INFO] [stderr] Downloaded serde_derive v1.0.204 [INFO] [stderr] Downloaded serde v1.0.204 [INFO] [stderr] Downloaded clap v4.5.10 [INFO] [stderr] Downloaded bytes v1.6.1 [INFO] [stderr] Downloaded clap_builder v4.5.10 [INFO] [stderr] Downloaded noodles-fasta v0.39.0 [INFO] [stderr] Downloaded clap-verbosity-flag v2.2.0 [INFO] [stderr] Downloaded env_filter v0.1.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 07c2b6760d1ed7e37a0ef9a5543ec91b29bf1e4700c0448f555dd3f34acf339d [INFO] running `Command { std: "docker" "start" "-a" "07c2b6760d1ed7e37a0ef9a5543ec91b29bf1e4700c0448f555dd3f34acf339d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "07c2b6760d1ed7e37a0ef9a5543ec91b29bf1e4700c0448f555dd3f34acf339d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "07c2b6760d1ed7e37a0ef9a5543ec91b29bf1e4700c0448f555dd3f34acf339d", kill_on_drop: false }` [INFO] [stdout] 07c2b6760d1ed7e37a0ef9a5543ec91b29bf1e4700c0448f555dd3f34acf339d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 016ced0988177712a46ab901131da833d826f8d0ab7fb4e107509a45324ccf09 [INFO] running `Command { std: "docker" "start" "-a" "016ced0988177712a46ab901131da833d826f8d0ab7fb4e107509a45324ccf09", kill_on_drop: false }` [INFO] [stderr] Compiling unicode-ident v1.0.12 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Compiling pkg-config v0.3.30 [INFO] [stderr] Compiling zerocopy v0.7.35 [INFO] [stderr] Compiling bytes v1.6.1 [INFO] [stderr] Compiling thiserror v1.0.63 [INFO] [stderr] Compiling smallvec v1.13.2 [INFO] [stderr] Compiling miniz_oxide v0.7.4 [INFO] [stderr] Compiling bstr v1.9.1 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling iana-time-zone v0.1.60 [INFO] [stderr] Compiling bitflags v2.6.0 [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling tracing-core v0.1.32 [INFO] [stderr] Compiling noodles-core v0.15.0 [INFO] [stderr] Compiling libsqlite3-sys v0.28.0 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Compiling syn v2.0.72 [INFO] [stderr] Compiling crossbeam-channel v0.5.13 [INFO] [stderr] Compiling flate2 v1.0.30 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling chrono v0.4.38 [INFO] [stderr] Compiling noodles-bgzf v0.30.0 [INFO] [stderr] Compiling noodles-fasta v0.39.0 [INFO] [stderr] Compiling noodles v0.76.0 [INFO] [stderr] Compiling hashlink v0.9.1 [INFO] [stderr] Compiling rusqlite v0.31.0 [INFO] [stderr] Compiling thiserror-impl v1.0.63 [INFO] [stderr] Compiling tracing-attributes v0.1.27 [INFO] [stderr] Compiling tracing v0.1.40 [INFO] [stderr] Compiling seqrepo v0.10.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 12.05s [INFO] running `Command { std: "docker" "inspect" "016ced0988177712a46ab901131da833d826f8d0ab7fb4e107509a45324ccf09", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "016ced0988177712a46ab901131da833d826f8d0ab7fb4e107509a45324ccf09", kill_on_drop: false }` [INFO] [stdout] 016ced0988177712a46ab901131da833d826f8d0ab7fb4e107509a45324ccf09 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9ea6e5678dda4a9221d1e6eba05af8ebc230bed7931a5e790fc1f812077296ca [INFO] running `Command { std: "docker" "start" "-a" "9ea6e5678dda4a9221d1e6eba05af8ebc230bed7931a5e790fc1f812077296ca", kill_on_drop: false }` [INFO] [stderr] Compiling anstyle v1.0.7 [INFO] [stderr] Compiling colorchoice v1.0.1 [INFO] [stderr] Compiling anstyle-query v1.1.0 [INFO] [stderr] Compiling is_terminal_polyfill v1.70.0 [INFO] [stderr] Compiling anstyle-parse v0.2.4 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling regex-syntax v0.8.4 [INFO] [stderr] Compiling tracing-core v0.1.32 [INFO] [stderr] Compiling clap_lex v0.7.1 [INFO] [stderr] Compiling clap_derive v4.5.8 [INFO] [stderr] Compiling overload v0.1.1 [INFO] [stderr] Compiling anyhow v1.0.86 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling test-log-macros v0.2.16 [INFO] [stderr] Compiling thread_local v1.1.8 [INFO] [stderr] Compiling unicode-width v0.1.13 [INFO] [stderr] Compiling nu-ansi-term v0.46.0 [INFO] [stderr] Compiling unicode-linebreak v0.1.5 [INFO] [stderr] Compiling yansi v0.5.1 [INFO] [stderr] Compiling smawk v0.3.2 [INFO] [stderr] Compiling temp_testdir v0.2.3 [INFO] [stderr] Compiling pretty_assertions v1.4.0 [INFO] [stderr] Compiling textwrap v0.16.1 [INFO] [stderr] Compiling anstream v0.6.14 [INFO] [stderr] Compiling tracing v0.1.40 [INFO] [stderr] Compiling tracing-log v0.2.0 [INFO] [stderr] Compiling clap_builder v4.5.10 [INFO] [stderr] Compiling seqrepo v0.10.3 (/opt/rustwide/workdir) [INFO] [stderr] Compiling tracing-subscriber v0.3.18 [INFO] [stderr] Compiling regex-automata v0.4.7 [INFO] [stderr] Compiling clap v4.5.10 [INFO] [stderr] Compiling clap-verbosity-flag v2.2.0 [INFO] [stderr] Compiling regex v1.10.5 [INFO] [stderr] Compiling env_filter v0.1.1 [INFO] [stderr] Compiling env_logger v0.11.4 [INFO] [stderr] Compiling test-log v0.2.16 [INFO] [stdout] warning: unused imports: `arg` and `command` [INFO] [stdout] --> examples/cli.rs:3:12 [INFO] [stdout] | [INFO] [stdout] 3 | use clap::{arg, command, Args, Parser, Subcommand, ValueEnum}; [INFO] [stdout] | ^^^ ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 14.71s [INFO] running `Command { std: "docker" "inspect" "9ea6e5678dda4a9221d1e6eba05af8ebc230bed7931a5e790fc1f812077296ca", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9ea6e5678dda4a9221d1e6eba05af8ebc230bed7931a5e790fc1f812077296ca", kill_on_drop: false }` [INFO] [stdout] 9ea6e5678dda4a9221d1e6eba05af8ebc230bed7931a5e790fc1f812077296ca [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 40da6cf560dffc4aff5e234511e162514dd31d1b9cbb777e18543420c234158f [INFO] running `Command { std: "docker" "start" "-a" "40da6cf560dffc4aff5e234511e162514dd31d1b9cbb777e18543420c234158f", kill_on_drop: false }` [INFO] [stderr] warning: unused imports: `arg` and `command` [INFO] [stderr] --> examples/cli.rs:3:12 [INFO] [stderr] | [INFO] [stderr] 3 | use clap::{arg, command, Args, Parser, Subcommand, ValueEnum}; [INFO] [stderr] | ^^^ ^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: `seqrepo` (example "cli") generated 1 warning (run `cargo fix --example "cli" -p seqrepo` to apply 1 suggestion) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.13s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/seqrepo-d8e6ab9544cf5142) [INFO] [stdout] [INFO] [stdout] running 14 tests [INFO] [stdout] test aliases::test::test_sync ... ok [INFO] [stdout] test fasta::test::test_sync ... ok [INFO] [stdout] test repo::test::test_sync ... ok [INFO] [stdout] test aliases::test::try_clone ... ok [INFO] [stdout] test aliases::test::smoke_test ... ok [INFO] [stdout] test fasta::test::fetch_sequence_part ... ok [INFO] [stdout] test repo::test::seqrepo_smoke ... ok [INFO] [stdout] test aliases::test::find_no_wildcard ... ok [INFO] [stdout] test fasta::test::fetch_sequence ... ok [INFO] [stdout] test aliases::test::find_wildcard ... ok [INFO] [stdout] test fasta::test::fetch_seqinfo ... ok [INFO] [stdout] test fasta::test::smoke ... ok [INFO] [stdout] test repo::test::fetch_sequence ... ok [INFO] [stdout] test repo::test::fetch_sequence_part ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 14 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Doc-tests seqrepo [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "40da6cf560dffc4aff5e234511e162514dd31d1b9cbb777e18543420c234158f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "40da6cf560dffc4aff5e234511e162514dd31d1b9cbb777e18543420c234158f", kill_on_drop: false }` [INFO] [stdout] 40da6cf560dffc4aff5e234511e162514dd31d1b9cbb777e18543420c234158f