[INFO] fetching crate qsar 0.0.2... [INFO] testing qsar-0.0.2 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate qsar 0.0.2 into /workspace/builds/worker-3-tc1/source [INFO] started tweaking crates.io crate qsar 0.0.2 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate qsar 0.0.2 [INFO] tweaked toml for crates.io crate qsar 0.0.2 written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate qsar 0.0.2 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate qsar 0.0.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded term v1.2.0 [INFO] [stderr] Downloaded take_mut v0.2.2 [INFO] [stderr] Downloaded wasm-bindgen-shared v0.2.105 [INFO] [stderr] Downloaded zerocopy-derive v0.8.30 [INFO] [stderr] Downloaded ndarray-csv v0.5.1 [INFO] [stderr] Downloaded slog-term v2.9.2 [INFO] [stderr] Downloaded js-sys v0.3.82 [INFO] [stderr] Downloaded linfa-datasets v0.6.1 [INFO] [stderr] Downloaded wasm-bindgen-macro-support v0.2.105 [INFO] [stderr] Downloaded cc v1.2.47 [INFO] [stderr] Downloaded argmin v0.4.7 [INFO] [stderr] Downloaded linfa v0.6.1 [INFO] [stderr] Downloaded wasm-bindgen v0.2.105 [INFO] [stderr] Downloaded slog v2.8.2 [INFO] [stderr] Downloaded linfa-linear v0.6.1 [INFO] [stderr] Downloaded ndarray-rand v0.14.0 [INFO] [stderr] Downloaded ndarray v0.15.6 [INFO] [stderr] Downloaded chrono v0.4.42 [INFO] [stderr] Downloaded zerocopy v0.8.30 [INFO] [stderr] Downloaded slog-async v2.8.0 [INFO] [stderr] Downloaded slog-json v2.6.1 [INFO] [stderr] Downloaded wasm-bindgen-macro v0.2.105 [INFO] [stderr] Downloaded linfa-linalg v0.1.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 09b792282cbbbec95e407228c63f4121362c76caa4de35ede623738531a9192d [INFO] running `Command { std: "docker" "start" "-a" "09b792282cbbbec95e407228c63f4121362c76caa4de35ede623738531a9192d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "09b792282cbbbec95e407228c63f4121362c76caa4de35ede623738531a9192d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "09b792282cbbbec95e407228c63f4121362c76caa4de35ede623738531a9192d", kill_on_drop: false }` [INFO] [stdout] 09b792282cbbbec95e407228c63f4121362c76caa4de35ede623738531a9192d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 0a7fcb32cc8ba90eb439e7e8609a4303658a6cfeea82c4a74871da731d2b7d6d [INFO] running `Command { std: "docker" "start" "-a" "0a7fcb32cc8ba90eb439e7e8609a4303658a6cfeea82c4a74871da731d2b7d6d", kill_on_drop: false }` [INFO] [stderr] Compiling quote v1.0.42 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling zerocopy v0.8.30 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Compiling getrandom v0.2.16 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling syn v2.0.111 [INFO] [stderr] Compiling num-conv v0.1.0 [INFO] [stderr] Compiling powerfmt v0.2.0 [INFO] [stderr] Compiling time-core v0.1.6 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling time-macros v0.2.24 [INFO] [stderr] Compiling deranged v0.5.5 [INFO] [stderr] Compiling slog v2.8.2 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling approx v0.4.0 [INFO] [stderr] Compiling linfa v0.6.1 [INFO] [stderr] Compiling num-bigint v0.4.6 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Compiling iana-time-zone v0.1.64 [INFO] [stderr] Compiling slog-async v2.8.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling chrono v0.4.42 [INFO] [stderr] Compiling num-iter v0.1.45 [INFO] [stderr] Compiling crossbeam-channel v0.5.15 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling is-terminal v0.4.17 [INFO] [stderr] Compiling time v0.3.44 [INFO] [stderr] Compiling take_mut v0.2.2 [INFO] [stderr] Compiling term v1.2.0 [INFO] [stderr] Compiling simd-adler32 v0.3.7 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling instant v0.1.13 [INFO] [stderr] Compiling serde_json v1.0.145 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling num v0.4.3 [INFO] [stderr] Compiling flate2 v1.1.5 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling erased-serde v0.3.31 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand_xorshift v0.3.0 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling slog-term v2.9.2 [INFO] [stderr] Compiling slog-json v2.6.1 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling ndarray-rand v0.14.0 [INFO] [stderr] Compiling ndarray-csv v0.5.1 [INFO] [stderr] Compiling linfa-linalg v0.1.0 [INFO] [stderr] Compiling argmin v0.4.7 [INFO] [stderr] Compiling linfa-datasets v0.6.1 [INFO] [stderr] Compiling linfa-linear v0.6.1 [INFO] [stderr] Compiling qsar v0.0.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 49.21s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: argmin v0.4.7 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1` [INFO] running `Command { std: "docker" "inspect" "0a7fcb32cc8ba90eb439e7e8609a4303658a6cfeea82c4a74871da731d2b7d6d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0a7fcb32cc8ba90eb439e7e8609a4303658a6cfeea82c4a74871da731d2b7d6d", kill_on_drop: false }` [INFO] [stdout] 0a7fcb32cc8ba90eb439e7e8609a4303658a6cfeea82c4a74871da731d2b7d6d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 452273bd9f1a70c40800a67a9d621b0fc9fa537c4539e1e699fafcb2a4193b65 [INFO] running `Command { std: "docker" "start" "-a" "452273bd9f1a70c40800a67a9d621b0fc9fa537c4539e1e699fafcb2a4193b65", kill_on_drop: false }` [INFO] [stderr] Compiling yansi v1.0.1 [INFO] [stderr] Compiling diff v0.1.13 [INFO] [stderr] Compiling pretty_assertions v1.4.1 [INFO] [stderr] Compiling qsar v0.0.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 3.72s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: argmin v0.4.7 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1` [INFO] running `Command { std: "docker" "inspect" "452273bd9f1a70c40800a67a9d621b0fc9fa537c4539e1e699fafcb2a4193b65", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "452273bd9f1a70c40800a67a9d621b0fc9fa537c4539e1e699fafcb2a4193b65", kill_on_drop: false }` [INFO] [stdout] 452273bd9f1a70c40800a67a9d621b0fc9fa537c4539e1e699fafcb2a4193b65 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] e02bc1a6ac486e6d90fcbbd31be657b7e62ab474f3755583c328569bbddaed32 [INFO] running `Command { std: "docker" "start" "-a" "e02bc1a6ac486e6d90fcbbd31be657b7e62ab474f3755583c328569bbddaed32", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.14s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: argmin v0.4.7 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1` [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/qsar-9698f57a12035a99) [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test data_io::tests::read_csv_from_reader_example ... ok [INFO] [stdout] test descriptors::tests::ethanol_molecular_weight_smiles_cco ... ok [INFO] [stdout] test descriptors::tests::formula_parsing_h2o ... ok [INFO] [stdout] test descriptors::tests::water_molecular_weight_smiles_o ... ok [INFO] [stdout] test models::tests::conversion_checks_shapes ... ok [INFO] [stdout] test models::tests::to_ndarrays_and_train_example_runs ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/integration_test.rs (/opt/rustwide/target/debug/deps/integration_test-6f6b17e896eb3243) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test integration_smiles_and_model ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Doc-tests qsar [INFO] [stdout] [INFO] [stdout] running 7 tests [INFO] [stdout] test src/lib.rs - (line 17) - compile ... ok [INFO] [stdout] test src/lib.rs - (line 26) - compile ... ok [INFO] [stdout] test src/data_io.rs - data_io::read_csv_descriptors (line 26) - compile ... ok [INFO] [stdout] test src/lib.rs - (line 34) - compile ... ok [INFO] [stdout] test src/models.rs - models::to_ndarrays (line 24) ... ok [INFO] [stdout] test src/descriptors.rs - descriptors::molecular_weight (line 49) ... ok [INFO] [stdout] test src/models.rs - models::train_and_predict_example (line 80) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.92s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e02bc1a6ac486e6d90fcbbd31be657b7e62ab474f3755583c328569bbddaed32", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e02bc1a6ac486e6d90fcbbd31be657b7e62ab474f3755583c328569bbddaed32", kill_on_drop: false }` [INFO] [stdout] e02bc1a6ac486e6d90fcbbd31be657b7e62ab474f3755583c328569bbddaed32