[INFO] fetching crate phenopacket-builder 0.1.0... [INFO] testing phenopacket-builder-0.1.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate phenopacket-builder 0.1.0 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate phenopacket-builder 0.1.0 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate phenopacket-builder 0.1.0 [INFO] tweaked toml for crates.io crate phenopacket-builder 0.1.0 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate phenopacket-builder 0.1.0 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate phenopacket-builder 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded quote v1.0.42 [INFO] [stderr] Downloaded prost v0.14.1 [INFO] [stderr] Downloaded prost-types v0.14.1 [INFO] [stderr] Downloaded multimap v0.10.1 [INFO] [stderr] Downloaded fixedbitset v0.5.7 [INFO] [stderr] Downloaded once_cell v1.21.3 [INFO] [stderr] Downloaded unicode-ident v1.0.22 [INFO] [stderr] Downloaded wit-bindgen v0.46.0 [INFO] [stderr] Downloaded indexmap v2.12.1 [INFO] [stderr] Downloaded memchr v2.7.6 [INFO] [stderr] Downloaded wasip2 v1.0.1+wasi-0.2.4 [INFO] [stderr] Downloaded itertools v0.14.0 [INFO] [stderr] Downloaded bytes v1.11.0 [INFO] [stderr] Downloaded regex v1.12.2 [INFO] [stderr] Downloaded prost-build v0.14.1 [INFO] [stderr] Downloaded phenopackets v0.2.2-post2 [INFO] [stderr] Downloaded proc-macro2 v1.0.103 [INFO] [stderr] Downloaded bitflags v2.10.0 [INFO] [stderr] Downloaded tempfile v3.23.0 [INFO] [stderr] Downloaded anyhow v1.0.100 [INFO] [stderr] Downloaded prost-derive v0.14.1 [INFO] [stderr] Downloaded syn v2.0.111 [INFO] [stderr] Downloaded rustix v1.1.2 [INFO] [stderr] Downloaded regex-syntax v0.8.8 [INFO] [stderr] Downloaded regex-automata v0.4.13 [INFO] [stderr] Downloaded petgraph v0.7.1 [INFO] [stderr] Downloaded linux-raw-sys v0.11.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4a4a8b13aca36a4315b8c5b6436cdb9daedb74bbfcd37dd9ae240ae8958cae2c [INFO] running `Command { std: "docker" "start" "-a" "4a4a8b13aca36a4315b8c5b6436cdb9daedb74bbfcd37dd9ae240ae8958cae2c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4a4a8b13aca36a4315b8c5b6436cdb9daedb74bbfcd37dd9ae240ae8958cae2c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4a4a8b13aca36a4315b8c5b6436cdb9daedb74bbfcd37dd9ae240ae8958cae2c", kill_on_drop: false }` [INFO] [stdout] 4a4a8b13aca36a4315b8c5b6436cdb9daedb74bbfcd37dd9ae240ae8958cae2c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 454c7c0f6d78797389c899d724c063478cd81b084872b70d470391a5f5e602b1 [INFO] running `Command { std: "docker" "start" "-a" "454c7c0f6d78797389c899d724c063478cd81b084872b70d470391a5f5e602b1", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.103 [INFO] [stderr] Compiling unicode-ident v1.0.22 [INFO] [stderr] Compiling quote v1.0.42 [INFO] [stderr] Compiling anyhow v1.0.100 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling bytes v1.11.0 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling syn v2.0.111 [INFO] [stderr] Compiling prost-derive v0.14.1 [INFO] [stderr] Compiling prost v0.14.1 [INFO] [stderr] Compiling prost-types v0.14.1 [INFO] [stderr] Compiling phenopackets v0.2.2-post2 [INFO] [stderr] Compiling phenopacket-builder v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 16.39s [INFO] running `Command { std: "docker" "inspect" "454c7c0f6d78797389c899d724c063478cd81b084872b70d470391a5f5e602b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "454c7c0f6d78797389c899d724c063478cd81b084872b70d470391a5f5e602b1", kill_on_drop: false }` [INFO] [stdout] 454c7c0f6d78797389c899d724c063478cd81b084872b70d470391a5f5e602b1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 063c5eb492befbeee807cca83e1ee8b1a933bdc5466312e3c57b55754756c881 [INFO] running `Command { std: "docker" "start" "-a" "063c5eb492befbeee807cca83e1ee8b1a933bdc5466312e3c57b55754756c881", kill_on_drop: false }` [INFO] [stderr] Compiling phenopacket-builder v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.77s [INFO] running `Command { std: "docker" "inspect" "063c5eb492befbeee807cca83e1ee8b1a933bdc5466312e3c57b55754756c881", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "063c5eb492befbeee807cca83e1ee8b1a933bdc5466312e3c57b55754756c881", kill_on_drop: false }` [INFO] [stdout] 063c5eb492befbeee807cca83e1ee8b1a933bdc5466312e3c57b55754756c881 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] b322d2e2f6bec5a7ab3e746f8193aad5d8d1fc81e8663e1674dc693fe272b337 [INFO] running `Command { std: "docker" "start" "-a" "b322d2e2f6bec5a7ab3e746f8193aad5d8d1fc81e8663e1674dc693fe272b337", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/phenopacket_builder-31cd7513c8819168) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/use_cases.rs (/opt/rustwide/target/debug/deps/use_cases-9f7ee9f5e8c02edd) [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test v2::build_a_phenopacket ... ok [INFO] [stdout] test v2::build_an_individual ... ok [INFO] [stdout] test v2::build_an_ontology_class ... ok [INFO] [stderr] Doc-tests phenopacket_builder [INFO] [stdout] test v2::builder_can_be_stored_as_a_variable ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 9 tests [INFO] [stdout] test src/v2/core/base.rs - v2::core::base::TimeElementBuilder::age (line 115) ... ok [INFO] [stdout] test src/v2/core/base.rs - v2::core::base::AgeBuilder::iso8601duration (line 223) ... ok [INFO] [stdout] test src/lib.rs - T (line 38) ... ok [INFO] [stdout] test src/v2/core/base.rs - v2::core::base::TimeElementBuilder::gestational_age (line 55) ... ok [INFO] [stdout] test src/v2/mod.rs - v2::TimestampBuilder::iso8601timestamp (line 52) ... ok [INFO] [stdout] test src/v2/core/base.rs - v2::core::base::TimeElementBuilder::age_iso8601duration (line 147) ... ok [INFO] [stdout] test src/lib.rs - oc (line 60) ... ok [INFO] [stdout] test src/v2/mod.rs - v2::TimestampBuilder::iso8601timestamp (line 66) ... ok [INFO] [stdout] test src/v2/mod.rs - v2::TimestampBuilder::seconds_nanos (line 19) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 9 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 1.15s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "b322d2e2f6bec5a7ab3e746f8193aad5d8d1fc81e8663e1674dc693fe272b337", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b322d2e2f6bec5a7ab3e746f8193aad5d8d1fc81e8663e1674dc693fe272b337", kill_on_drop: false }` [INFO] [stdout] b322d2e2f6bec5a7ab3e746f8193aad5d8d1fc81e8663e1674dc693fe272b337