[INFO] fetching crate omics-molecule 0.2.0... [INFO] testing omics-molecule-0.2.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate omics-molecule 0.2.0 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate omics-molecule 0.2.0 [INFO] finished tweaking crates.io crate omics-molecule 0.2.0 [INFO] tweaked toml for crates.io crate omics-molecule 0.2.0 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate omics-molecule 0.2.0 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate omics-molecule 0.2.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded omics-core v0.1.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] da15cf0bce5652b86ad13f6afc964095ea76f23df4ea21c162eac9202f362817 [INFO] running `Command { std: "docker" "start" "-a" "da15cf0bce5652b86ad13f6afc964095ea76f23df4ea21c162eac9202f362817", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "da15cf0bce5652b86ad13f6afc964095ea76f23df4ea21c162eac9202f362817", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "da15cf0bce5652b86ad13f6afc964095ea76f23df4ea21c162eac9202f362817", kill_on_drop: false }` [INFO] [stdout] da15cf0bce5652b86ad13f6afc964095ea76f23df4ea21c162eac9202f362817 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1c03b3210712d0beb39ccac34245029ec8e29628c053edac127369d97415a1dc [INFO] running `Command { std: "docker" "start" "-a" "1c03b3210712d0beb39ccac34245029ec8e29628c053edac127369d97415a1dc", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.101 [INFO] [stderr] Compiling unicode-ident v1.0.19 [INFO] [stderr] Compiling quote v1.0.41 [INFO] [stderr] Compiling omics-core v0.1.0 [INFO] [stderr] Compiling syn v2.0.107 [INFO] [stderr] Compiling thiserror-impl v2.0.17 [INFO] [stderr] Compiling thiserror v2.0.17 [INFO] [stderr] Compiling omics-molecule v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 4.51s [INFO] running `Command { std: "docker" "inspect" "1c03b3210712d0beb39ccac34245029ec8e29628c053edac127369d97415a1dc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1c03b3210712d0beb39ccac34245029ec8e29628c053edac127369d97415a1dc", kill_on_drop: false }` [INFO] [stdout] 1c03b3210712d0beb39ccac34245029ec8e29628c053edac127369d97415a1dc [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b60ac6fa6b8cc5c18b930fdc910e4d7a2bed5f9d7338c2dbbf01a2283e9df02e [INFO] running `Command { std: "docker" "start" "-a" "b60ac6fa6b8cc5c18b930fdc910e4d7a2bed5f9d7338c2dbbf01a2283e9df02e", kill_on_drop: false }` [INFO] [stderr] Compiling omics-molecule v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.61s [INFO] running `Command { std: "docker" "inspect" "b60ac6fa6b8cc5c18b930fdc910e4d7a2bed5f9d7338c2dbbf01a2283e9df02e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b60ac6fa6b8cc5c18b930fdc910e4d7a2bed5f9d7338c2dbbf01a2283e9df02e", kill_on_drop: false }` [INFO] [stdout] b60ac6fa6b8cc5c18b930fdc910e4d7a2bed5f9d7338c2dbbf01a2283e9df02e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 3605936eaa1e9b28caae615468c21051755b5411971aea0500f04d0f2d2de25f [INFO] running `Command { std: "docker" "start" "-a" "3605936eaa1e9b28caae615468c21051755b5411971aea0500f04d0f2d2de25f", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.03s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/omics_molecule-8d2a8d4e1eeef21a) [INFO] [stdout] [INFO] [stdout] running 27 tests [INFO] [stdout] test compound::kind::tests::it_correctly_assigns_a_type_to_rna_nucleotides ... ok [INFO] [stdout] test compound::nucleotide::relation::substitution::tests::it_correctly_creates_a_substitution ... ok [INFO] [stdout] test compound::kind::tests::it_correctly_assigns_a_type_to_dna_nucleotides ... ok [INFO] [stdout] test compound::nucleotide::relation::tests::it_correctly_identifies_a_deletion ... ok [INFO] [stdout] test compound::nucleotide::relation::tests::it_correctly_identifies_all_dna_transitions ... ok [INFO] [stdout] test compound::nucleotide::relation::tests::it_correctly_identifies_all_rna_transversions ... ok [INFO] [stdout] test compound::nucleotide::relation::tests::it_correctly_identifies_an_insertion ... ok [INFO] [stdout] test compound::nucleotide::relation::substitution::tests::it_correctly_refuses_to_create_a_substitution_with_identical_nucleotides ... ok [INFO] [stdout] test polymer::dna::nucleotide::tests::it_correctly_defines_transcribed_nucleotides ... ok [INFO] [stdout] test polymer::dna::nucleotide::tests::it_correctly_deserializes_nucleotides ... ok [INFO] [stdout] test polymer::dna::nucleotide::tests::it_correctly_creates_a_nucleotide_from_a_char ... ok [INFO] [stdout] test polymer::dna::nucleotide::tests::it_correctly_defines_analogous_nucleotides ... ok [INFO] [stdout] test polymer::dna::nucleotide::tests::it_correctly_serializes_nucleotides ... ok [INFO] [stdout] test compound::nucleotide::relation::tests::it_correctly_identifies_all_rna_transitions ... ok [INFO] [stdout] test polymer::dna::tests::it_parses_a_molecule_from_a_valid_string ... ok [INFO] [stdout] test polymer::rna::nucleotide::tests::it_correctly_creates_a_nucleotide_from_a_char ... ok [INFO] [stdout] test polymer::rna::nucleotide::tests::it_correctly_defines_reverse_transcribed_nucleotides ... ok [INFO] [stdout] test polymer::rna::nucleotide::tests::it_correctly_deserializes_nucleotides ... ok [INFO] [stdout] test polymer::rna::tests::it_creates_a_molecule_from_a_vec_of_nucleotides ... ok [INFO] [stdout] test polymer::rna::nucleotide::tests::it_correctly_serializes_nucleotides ... ok [INFO] [stdout] test polymer::rna::tests::it_fails_to_parse_a_molecule_from_an_invalid_string ... ok [INFO] [stdout] test polymer::rna::tests::it_parses_a_molecule_from_a_valid_string ... ok [INFO] [stdout] test polymer::dna::tests::it_fails_to_parse_a_molecule_from_an_invalid_string ... ok [INFO] [stdout] test polymer::dna::tests::it_creates_a_molecule_from_a_vec_of_nucleotides ... ok [INFO] [stdout] test compound::nucleotide::relation::tests::it_does_not_allow_an_empty_relation ... ok [INFO] [stdout] test compound::nucleotide::relation::tests::it_correctly_identifies_all_dna_transversions ... ok [INFO] [stderr] Doc-tests omics_molecule [INFO] [stdout] test polymer::rna::nucleotide::tests::it_correctly_defines_analogous_nucleotides ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 27 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.03s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 16 tests [INFO] [stdout] test src/compound/nucleotide/relation.rs - compound::nucleotide::relation::Relation::try_new (line 69) ... ok [INFO] [stdout] test src/polymer/rna.rs - polymer::rna::Molecule::inner (line 25) ... ok [INFO] [stdout] test src/compound/nucleotide/relation/substitution.rs - compound::nucleotide::relation::substitution::Substitution::try_new (line 35) ... ok [INFO] [stdout] test src/compound/nucleotide/relation.rs - compound::nucleotide::relation::Relation::as_substitution (line 156) ... ok [INFO] [stdout] test src/compound/nucleotide/relation/substitution.rs - compound::nucleotide::relation::substitution::Substitution::kind (line 62) ... ok [INFO] [stdout] test src/compound/nucleotide/relation.rs - compound::nucleotide::relation::Relation::alternate (line 126) ... ok [INFO] [stdout] test src/compound/nucleotide/relation/substitution.rs - compound::nucleotide::relation::substitution::Substitution::reference (line 83) ... ok [INFO] [stdout] test src/polymer/rna.rs - polymer::rna::Molecule::gc_content (line 63) ... ok [INFO] [stdout] test src/polymer/dna.rs - polymer::dna::Molecule::inner (line 25) ... ok [INFO] [stdout] test src/polymer/dna.rs - polymer::dna::Molecule::into_inner (line 41) ... ok [INFO] [stdout] test src/polymer/dna.rs - polymer::dna::Molecule::gc_content (line 63) ... ok [INFO] [stdout] test src/polymer/rna.rs - polymer::rna::Molecule::into_inner (line 41) ... ok [INFO] [stdout] test src/compound/nucleotide/relation/substitution.rs - compound::nucleotide::relation::substitution::Substitution::into_parts (line 115) ... ok [INFO] [stdout] test src/compound/nucleotide/relation/substitution.rs - compound::nucleotide::relation::substitution::Substitution::alternate (line 99) ... ok [INFO] [stdout] test src/compound/nucleotide/relation.rs - compound::nucleotide::relation::Relation::reference (line 98) ... ok [INFO] [stdout] test src/compound/nucleotide/relation.rs - compound::nucleotide::relation::Relation::into_nucleotides (line 184) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 16 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 1.01s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "3605936eaa1e9b28caae615468c21051755b5411971aea0500f04d0f2d2de25f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3605936eaa1e9b28caae615468c21051755b5411971aea0500f04d0f2d2de25f", kill_on_drop: false }` [INFO] [stdout] 3605936eaa1e9b28caae615468c21051755b5411971aea0500f04d0f2d2de25f