[INFO] fetching crate omics-coordinate 0.4.0... [INFO] testing omics-coordinate-0.4.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate omics-coordinate 0.4.0 into /workspace/builds/worker-4-tc1/source [INFO] started tweaking crates.io crate omics-coordinate 0.4.0 [INFO] finished tweaking crates.io crate omics-coordinate 0.4.0 [INFO] tweaked toml for crates.io crate omics-coordinate 0.4.0 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate omics-coordinate 0.4.0 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate omics-coordinate 0.4.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded clap v4.5.49 [INFO] [stderr] Downloaded omics-core v0.1.0 [INFO] [stderr] Downloaded clap_builder v4.5.49 [INFO] [stderr] Downloaded syn v2.0.107 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c20f51e2afadaf223c40f96a353409fc6bba8a4224a2a0a3b6aa5b72e9ea4177 [INFO] running `Command { std: "docker" "start" "-a" "c20f51e2afadaf223c40f96a353409fc6bba8a4224a2a0a3b6aa5b72e9ea4177", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c20f51e2afadaf223c40f96a353409fc6bba8a4224a2a0a3b6aa5b72e9ea4177", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c20f51e2afadaf223c40f96a353409fc6bba8a4224a2a0a3b6aa5b72e9ea4177", kill_on_drop: false }` [INFO] [stdout] c20f51e2afadaf223c40f96a353409fc6bba8a4224a2a0a3b6aa5b72e9ea4177 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1f3f6b1d6c231899fcdc13904a3036a4512318f1323eff76162747f024df9d2f [INFO] running `Command { std: "docker" "start" "-a" "1f3f6b1d6c231899fcdc13904a3036a4512318f1323eff76162747f024df9d2f", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.101 [INFO] [stderr] Compiling unicode-ident v1.0.19 [INFO] [stderr] Compiling quote v1.0.41 [INFO] [stderr] Compiling thiserror v2.0.17 [INFO] [stderr] Compiling omics-core v0.1.0 [INFO] [stderr] Compiling syn v2.0.107 [INFO] [stderr] Compiling thiserror-impl v2.0.17 [INFO] [stderr] Compiling omics-coordinate v0.4.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 5.56s [INFO] running `Command { std: "docker" "inspect" "1f3f6b1d6c231899fcdc13904a3036a4512318f1323eff76162747f024df9d2f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1f3f6b1d6c231899fcdc13904a3036a4512318f1323eff76162747f024df9d2f", kill_on_drop: false }` [INFO] [stdout] 1f3f6b1d6c231899fcdc13904a3036a4512318f1323eff76162747f024df9d2f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 14df4cc193cd39ee4edcd1240f040f6e63dc97571cf801e2c6fa52fb2efdd725 [INFO] running `Command { std: "docker" "start" "-a" "14df4cc193cd39ee4edcd1240f040f6e63dc97571cf801e2c6fa52fb2efdd725", kill_on_drop: false }` [INFO] [stderr] Compiling zerocopy v0.8.27 [INFO] [stderr] Compiling libc v0.2.177 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling serde_json v1.0.145 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling clap_lex v0.7.6 [INFO] [stderr] Compiling regex-syntax v0.8.8 [INFO] [stderr] Compiling syn v2.0.107 [INFO] [stderr] Compiling anyhow v1.0.100 [INFO] [stderr] Compiling itertools v0.10.5 [INFO] [stderr] Compiling rayon v1.11.0 [INFO] [stderr] Compiling clap_builder v4.5.49 [INFO] [stderr] Compiling plotters v0.3.7 [INFO] [stderr] Compiling criterion-plot v0.5.0 [INFO] [stderr] Compiling is-terminal v0.4.16 [INFO] [stderr] Compiling regex-automata v0.4.13 [INFO] [stderr] Compiling clap v4.5.49 [INFO] [stderr] Compiling regex v1.12.2 [INFO] [stderr] Compiling zerocopy-derive v0.8.27 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v2.0.17 [INFO] [stderr] Compiling thiserror v2.0.17 [INFO] [stderr] Compiling omics-coordinate v0.4.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling half v2.7.1 [INFO] [stderr] Compiling ciborium-ll v0.2.2 [INFO] [stderr] Compiling ciborium v0.2.2 [INFO] [stderr] Compiling criterion v0.5.1 [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 21.19s [INFO] running `Command { std: "docker" "inspect" "14df4cc193cd39ee4edcd1240f040f6e63dc97571cf801e2c6fa52fb2efdd725", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "14df4cc193cd39ee4edcd1240f040f6e63dc97571cf801e2c6fa52fb2efdd725", kill_on_drop: false }` [INFO] [stdout] 14df4cc193cd39ee4edcd1240f040f6e63dc97571cf801e2c6fa52fb2efdd725 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] f66c8e48085c925c9df113a896a8991155391d807bdded8fd773a54bb2606c83 [INFO] running `Command { std: "docker" "start" "-a" "f66c8e48085c925c9df113a896a8991155391d807bdded8fd773a54bb2606c83", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.14s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/omics_coordinate-c47dd0236beaca41) [INFO] [stdout] [INFO] [stdout] running 51 tests [INFO] [stdout] test contig::tests::clone_is_shallow ... ok [INFO] [stdout] test contig::tests::try_from_string ... ok [INFO] [stdout] test contig::tests::try_new_empty ... ok [INFO] [stdout] test contig::tests::try_new_valid ... ok [INFO] [stdout] test contig::tests::parse ... ok [INFO] [stdout] test contig::tests::new_unchecked ... ok [INFO] [stdout] test coordinate::base::tests::nudge_backward ... ok [INFO] [stdout] test coordinate::interbase::tests::nudge_backward ... ok [INFO] [stdout] test coordinate::base::tests::nudge_forward ... ok [INFO] [stdout] test coordinate::interbase::tests::nudge_forward ... ok [INFO] [stdout] test interval::base::tests::contains ... ok [INFO] [stdout] test interval::base::tests::contains_entity ... ok [INFO] [stdout] test interval::interbase::tests::contains ... ok [INFO] [stdout] test interval::interbase::tests::contains_entity ... ok [INFO] [stdout] test interval::interbase::tests::contains_next_entity ... ok [INFO] [stdout] test contig::tests::parse_empty ... ok [INFO] [stdout] test interval::interbase::tests::contains_prev_entity ... ok [INFO] [stdout] test interval::tests::len ... ok [INFO] [stdout] test interval::tests::nonsensical_mismatched_contigs ... ok [INFO] [stdout] test interval::tests::negative_strand_clamp ... ok [INFO] [stdout] test interval::tests::nonsensical_mismatched_strands ... ok [INFO] [stdout] test interval::tests::parse ... ok [INFO] [stdout] test interval::tests::nonsensical_start_greater_than_end ... ok [INFO] [stdout] test interval::tests::positive_strand_offset ... ok [INFO] [stdout] test interval::tests::to_string ... ok [INFO] [stdout] test position::base::addition::tests::addition ... ok [INFO] [stdout] test position::base::addition::tests::overflow ... ok [INFO] [stdout] test interval::tests::positive_strand_clamp ... ok [INFO] [stdout] test position::base::tests::distance ... ok [INFO] [stdout] test position::base::tests::from_number ... ok [INFO] [stdout] test interval::tests::parse_error ... ok [INFO] [stdout] test position::base::tests::from_smaller_types ... ok [INFO] [stdout] test position::base::tests::parse ... ok [INFO] [stdout] test position::interbase::addition::tests::addition ... ok [INFO] [stdout] test position::interbase::addition::tests::overflow ... ok [INFO] [stdout] test position::interbase::subtraction::tests::overflow ... ok [INFO] [stdout] test position::interbase::tests::distance ... ok [INFO] [stdout] test position::base::subtraction::tests::addition ... ok [INFO] [stdout] test position::interbase::tests::from_smaller_types ... ok [INFO] [stdout] test position::interbase::tests::parse ... ok [INFO] [stdout] test interval::tests::zero_sized ... ok [INFO] [stdout] test position::interbase::tests::try_from_number ... ok [INFO] [stdout] test strand::tests::complement ... ok [INFO] [stdout] test interval::tests::valid ... ok [INFO] [stdout] test strand::tests::serialize ... ok [INFO] [stdout] test strand::tests::parse ... ok [INFO] [stdout] test contig::tests::try_from_str ... ok [INFO] [stdout] test interval::tests::negative_strand_offset ... ok [INFO] [stdout] test position::interbase::subtraction::tests::addition ... ok [INFO] [stdout] test position::base::subtraction::tests::overflow ... ok [INFO] [stdout] test position::tests::serialize ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 51 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.05s [INFO] [stdout] [INFO] [stderr] Doc-tests omics_coordinate [INFO] [stdout] [INFO] [stdout] running 42 tests [INFO] [stdout] test src/interval.rs - interval::Interval::contains_coordinate (line 567) ... ok [INFO] [stdout] test src/contig.rs - contig::Contig::try_new (line 48) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::contig (line 164) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::new (line 118) ... ok [INFO] [stdout] test src/contig.rs - contig::Contig::new_unchecked (line 77) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::into_position (line 236) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::strand (line 199) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::move_backward (line 397) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::into_contig (line 182) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::move_forward (line 284) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::into_move_forward (line 344) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::into_coordinates (line 439) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::contig (line 479) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::count_entities (line 705) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::into_end (line 403) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::into_parts (line 254) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::clamp (line 837) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::reverse_complement (line 1049) ... ok [INFO] [stdout] test src/lib.rs - (line 406) ... ignored [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::into_move_backward (line 455) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::contains_entity (line 648) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::coordinate_at_offset (line 969) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::swap_strand (line 505) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::coordinate_offset (line 908) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::end (line 367) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::into_start (line 331) ... ok [INFO] [stdout] test src/coordinate.rs - coordinate::Coordinate::position (line 217) ... ok [INFO] [stdout] test src/lib.rs - (line 51) ... ok [INFO] [stdout] test src/position.rs - position::Position::checked_sub (line 186) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::strand (line 515) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::start (line 295) ... ok [INFO] [stdout] test src/interval.rs - interval::Interval::try_new (line 212) ... ok [INFO] [stdout] test src/lib.rs - (line 72) ... ok [INFO] [stdout] test src/position.rs - position::Position::checked_add (line 166) ... ok [INFO] [stdout] test src/position.rs - position::Position::get (line 151) ... ok [INFO] [stdout] test src/position/base.rs - position::base::Position::try_new (line 42) ... ok [INFO] [stdout] test src/interval/base.rs - interval::base::Interval::into_equivalent_interbase (line 24) ... ok [INFO] [stdout] test src/interval/interbase.rs - interval::interbase::Interval::contains_prev_entity (line 89) ... ok [INFO] [stdout] test src/interval/interbase.rs - interval::interbase::Interval::contains_next_entity (line 42) ... ok [INFO] [stdout] test src/strand.rs - strand::Strand::complement (line 76) ... ok [INFO] [stdout] test src/position/interbase.rs - position::interbase::Position::new (line 42) ... ok [INFO] [stdout] test src/interval/interbase.rs - interval::interbase::Interval::into_equivalent_base (line 131) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 41 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 2.75s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "f66c8e48085c925c9df113a896a8991155391d807bdded8fd773a54bb2606c83", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f66c8e48085c925c9df113a896a8991155391d807bdded8fd773a54bb2606c83", kill_on_drop: false }` [INFO] [stdout] f66c8e48085c925c9df113a896a8991155391d807bdded8fd773a54bb2606c83