[INFO] fetching crate microBioRust 0.1.3...
[INFO] testing microBioRust-0.1.3 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1
[INFO] extracting crate microBioRust 0.1.3 into /workspace/builds/worker-7-tc1/source
[INFO] started tweaking crates.io crate microBioRust 0.1.3
[INFO] removed 0 missing examples
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate microBioRust 0.1.3
[INFO] tweaked toml for crates.io crate microBioRust 0.1.3 written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate microBioRust 0.1.3 on toolchain 562dee4820c458d823175268e41601d4c060588a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate microBioRust 0.1.3 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded protein-translate v0.2.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded compression-core v0.4.31
[INFO] [stderr]   Downloaded feature-probe v0.1.1
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded compression-codecs v0.4.36
[INFO] [stderr]   Downloaded bv v0.11.1
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded async-compression v0.4.39
[INFO] [stderr]   Downloaded unicode-ident v1.0.23
[INFO] [stderr]   Downloaded simba v0.9.1
[INFO] [stderr]   Downloaded statrs v0.18.0
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded bio v3.0.0
[INFO] [stderr]   Downloaded syn v2.0.115
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded nalgebra v0.33.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 45e7c798fd9c934d0ef2a22b237f5e0717f19407a539ebb7fa3988a37a084592
[INFO] running `Command { std: "docker" "start" "-a" "45e7c798fd9c934d0ef2a22b237f5e0717f19407a539ebb7fa3988a37a084592", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "45e7c798fd9c934d0ef2a22b237f5e0717f19407a539ebb7fa3988a37a084592", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "45e7c798fd9c934d0ef2a22b237f5e0717f19407a539ebb7fa3988a37a084592", kill_on_drop: false }`
[INFO] [stdout] 45e7c798fd9c934d0ef2a22b237f5e0717f19407a539ebb7fa3988a37a084592
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 81ca976e2d20f8e9e37ddd9e5b14eae386ea94d40c766529ce54ed201a8c422f
[INFO] running `Command { std: "docker" "start" "-a" "81ca976e2d20f8e9e37ddd9e5b14eae386ea94d40c766529ce54ed201a8c422f", kill_on_drop: false }`
[INFO] [stderr]    Compiling unicode-ident v1.0.23
[INFO] [stderr]    Compiling quote v1.0.44
[INFO] [stderr]    Compiling libc v0.2.182
[INFO] [stderr]    Compiling libm v0.2.16
[INFO] [stderr]    Compiling memchr v2.8.0
[INFO] [stderr]    Compiling zerocopy v0.8.39
[INFO] [stderr]    Compiling bytemuck v1.25.0
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling futures-core v0.3.31
[INFO] [stderr]    Compiling simd-adler32 v0.3.8
[INFO] [stderr]    Compiling regex-syntax v0.8.9
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.106
[INFO] [stderr]    Compiling futures-channel v0.3.31
[INFO] [stderr]    Compiling anyhow v1.0.101
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling slab v0.4.12
[INFO] [stderr]    Compiling bytes v1.11.1
[INFO] [stderr]    Compiling indexmap v2.13.0
[INFO] [stderr]    Compiling safe_arch v0.7.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling hashbrown v0.15.5
[INFO] [stderr]    Compiling syn v2.0.115
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling flate2 v1.1.9
[INFO] [stderr]    Compiling csv-core v0.1.13
[INFO] [stderr]    Compiling wide v0.7.33
[INFO] [stderr]    Compiling zmij v1.0.21
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling clap_lex v1.0.0
[INFO] [stderr]    Compiling fixedbitset v0.5.7
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]    Compiling ryu v1.0.23
[INFO] [stderr]    Compiling compression-core v0.4.31
[INFO] [stderr]    Compiling itertools v0.14.0
[INFO] [stderr]    Compiling clap_builder v4.5.58
[INFO] [stderr]    Compiling bit-set v0.8.0
[INFO] [stderr]    Compiling petgraph v0.8.3
[INFO] [stderr]    Compiling compression-codecs v0.4.36
[INFO] [stderr]    Compiling strum v0.26.3
[INFO] [stderr]    Compiling bytecount v0.6.9
[INFO] [stderr]    Compiling getrandom v0.2.17
[INFO] [stderr]    Compiling parking_lot_core v0.9.12
[INFO] [stderr]    Compiling errno v0.3.14
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling signal-hook-registry v1.4.8
[INFO] [stderr]    Compiling socket2 v0.6.2
[INFO] [stderr]    Compiling parking_lot v0.12.5
[INFO] [stderr]    Compiling mio v1.1.1
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling iana-time-zone v0.1.65
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling ordered-float v5.1.0
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling chrono v0.4.43
[INFO] [stderr]    Compiling protein-translate v0.2.0
[INFO] [stderr]    Compiling simba v0.9.1
[INFO] [stderr]    Compiling ndarray v0.16.1
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/562dee4820c458d823175268e41601d4c060588a/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/syn-2.0.115/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("clone-impls", "default", "derive", "extra-traits", "fold", "full", "parsing", "printing", "proc-macro", "test", "visit", "visit-mut"))' -C metadata=a2ea524922eb29c2 -C extra-filename=-a5d9f46652301c3b --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-183f829d39b9e7b0.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-923d3c87caf631c6.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-da5762ff2c56da29.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `regex-syntax` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/562dee4820c458d823175268e41601d4c060588a/bin/rustc --crate-name regex_syntax --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/regex-syntax-0.8.9/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --allow=unexpected_cfgs --check-cfg 'cfg(docsrs_regex)' --cfg 'feature="default"' --cfg 'feature="std"' --cfg 'feature="unicode"' --cfg 'feature="unicode-age"' --cfg 'feature="unicode-bool"' --cfg 'feature="unicode-case"' --cfg 'feature="unicode-gencat"' --cfg 'feature="unicode-perl"' --cfg 'feature="unicode-script"' --cfg 'feature="unicode-segment"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("arbitrary", "default", "std", "unicode", "unicode-age", "unicode-bool", "unicode-case", "unicode-gencat", "unicode-perl", "unicode-script", "unicode-segment"))' -C metadata=3c82a5b74debe53c -C extra-filename=-4c74db8415f6ed3c --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "81ca976e2d20f8e9e37ddd9e5b14eae386ea94d40c766529ce54ed201a8c422f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "81ca976e2d20f8e9e37ddd9e5b14eae386ea94d40c766529ce54ed201a8c422f", kill_on_drop: false }`
[INFO] [stdout] 81ca976e2d20f8e9e37ddd9e5b14eae386ea94d40c766529ce54ed201a8c422f