[INFO] fetching crate libradicl 0.13.0... [INFO] testing libradicl-0.13.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate libradicl 0.13.0 into /workspace/builds/worker-4-tc1/source [INFO] started tweaking crates.io crate libradicl 0.13.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate libradicl 0.13.0 [INFO] tweaked toml for crates.io crate libradicl 0.13.0 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate libradicl 0.13.0 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate libradicl 0.13.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded scroll v0.13.0 [INFO] [stderr] Downloaded bit-vec v0.9.1 [INFO] [stderr] Downloaded noodles-core v0.19.0 [INFO] [stderr] Downloaded noodles-csi v0.55.0 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded thiserror v1.0.57 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded lexical-write-integer v1.0.5 [INFO] [stderr] Downloaded cc v1.0.88 [INFO] [stderr] Downloaded noodles-bam v0.87.0 [INFO] [stderr] Downloaded lexical-write-float v1.0.5 [INFO] [stderr] Downloaded lexical-util v1.0.6 [INFO] [stderr] Downloaded hashbrown v0.14.3 [INFO] [stderr] Downloaded crossbeam-channel v0.5.11 [INFO] [stderr] Downloaded noodles-sam v0.83.0 [INFO] [stderr] Downloaded lexical-parse-float v1.0.5 [INFO] [stderr] Downloaded liblzma v0.3.6 [INFO] [stderr] Downloaded bitflags v2.4.2 [INFO] [stderr] Downloaded lexical-parse-integer v1.0.5 [INFO] [stderr] Downloaded lexical-core v1.0.5 [INFO] [stderr] Downloaded noodles-bgzf v0.46.0 [INFO] [stderr] Downloaded libradicl-macros v0.13.0 [INFO] [stderr] Downloaded buffer-redux v1.0.0 [INFO] [stderr] Downloaded thiserror-impl v1.0.57 [INFO] [stderr] Downloaded bytecount v0.6.7 [INFO] [stderr] Downloaded noodles v0.108.0 [INFO] [stderr] Downloaded needletail v0.6.3 [INFO] [stderr] Downloaded liblzma-sys v0.3.13 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 9fb2781a82a64ab843a7c7cc40e4d578c820e507e8fcd52c58e38c45e967d6ea [INFO] running `Command { std: "docker" "start" "-a" "9fb2781a82a64ab843a7c7cc40e4d578c820e507e8fcd52c58e38c45e967d6ea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "9fb2781a82a64ab843a7c7cc40e4d578c820e507e8fcd52c58e38c45e967d6ea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9fb2781a82a64ab843a7c7cc40e4d578c820e507e8fcd52c58e38c45e967d6ea", kill_on_drop: false }` [INFO] [stdout] 9fb2781a82a64ab843a7c7cc40e4d578c820e507e8fcd52c58e38c45e967d6ea [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2c098f4d166fb143e6bed5aaa8cc163c5fe9ecb22ec29fcdfe23d64facc19adb [INFO] running `Command { std: "docker" "start" "-a" "2c098f4d166fb143e6bed5aaa8cc163c5fe9ecb22ec29fcdfe23d64facc19adb", kill_on_drop: false }` [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling crc32fast v1.4.0 [INFO] [stderr] Compiling zlib-rs v0.5.5 [INFO] [stderr] Compiling hashbrown v0.14.3 [INFO] [stderr] Compiling bit-vec v0.9.1 [INFO] [stderr] Compiling lock_api v0.4.11 [INFO] [stderr] Compiling lexical-util v1.0.6 [INFO] [stderr] Compiling bstr v1.9.1 [INFO] [stderr] Compiling aho-corasick v1.1.2 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling zerocopy v0.8.26 [INFO] [stderr] Compiling parking_lot_core v0.9.9 [INFO] [stderr] Compiling bitflags v2.4.2 [INFO] [stderr] Compiling crossbeam-channel v0.5.11 [INFO] [stderr] Compiling thiserror v1.0.57 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v1.0.57 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Compiling lexical-parse-integer v1.0.5 [INFO] [stderr] Compiling lexical-write-integer v1.0.5 [INFO] [stderr] Compiling snap v1.1.1 [INFO] [stderr] Compiling noodles-core v0.19.0 [INFO] [stderr] Compiling lexical-parse-float v1.0.5 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling lexical-write-float v1.0.5 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling either v1.10.0 [INFO] [stderr] Compiling indexmap v2.2.3 [INFO] [stderr] Compiling dashmap v6.1.0 [INFO] [stderr] Compiling crossbeam-queue v0.3.12 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling libradicl-macros v0.13.0 [INFO] [stderr] Compiling scroll v0.13.0 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling lexical-core v1.0.5 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling bytemuck v1.25.0 [INFO] [stderr] Compiling regex-automata v0.4.5 [INFO] [stderr] Compiling num-bigint v0.4.6 [INFO] [stderr] Compiling num-iter v0.1.45 [INFO] [stderr] Compiling libz-rs-sys v0.5.5 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling noodles-bgzf v0.46.0 [INFO] [stderr] Compiling num v0.4.3 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling derivative v2.2.0 [INFO] [stderr] Compiling noodles-csi v0.55.0 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling regex v1.10.3 [INFO] [stderr] Compiling noodles-sam v0.83.0 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling noodles-bam v0.87.0 [INFO] [stderr] Compiling noodles v0.108.0 [INFO] [stderr] Compiling libradicl v0.13.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 24.93s [INFO] running `Command { std: "docker" "inspect" "2c098f4d166fb143e6bed5aaa8cc163c5fe9ecb22ec29fcdfe23d64facc19adb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2c098f4d166fb143e6bed5aaa8cc163c5fe9ecb22ec29fcdfe23d64facc19adb", kill_on_drop: false }` [INFO] [stdout] 2c098f4d166fb143e6bed5aaa8cc163c5fe9ecb22ec29fcdfe23d64facc19adb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3e50cda5783ff04ba81f1963de665ea1ff32bbfb6e38b2f25fb5e573028b11be [INFO] running `Command { std: "docker" "start" "-a" "3e50cda5783ff04ba81f1963de665ea1ff32bbfb6e38b2f25fb5e573028b11be", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.183 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Compiling safemem v0.3.3 [INFO] [stderr] Compiling console v0.16.3 [INFO] [stderr] Compiling bytecount v0.6.7 [INFO] [stderr] Compiling unit-prefix v0.5.2 [INFO] [stderr] Compiling buffer-redux v1.0.0 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling noodles-bgzf v0.46.0 [INFO] [stderr] Compiling indicatif v0.18.4 [INFO] [stderr] Compiling noodles-csi v0.55.0 [INFO] [stderr] Compiling noodles-sam v0.83.0 [INFO] [stderr] Compiling cc v1.0.88 [INFO] [stderr] Compiling zstd-sys v2.0.15+zstd.1.5.7 [INFO] [stderr] Compiling liblzma-sys v0.3.13 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling noodles-bam v0.87.0 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling noodles v0.108.0 [INFO] [stderr] Compiling libradicl v0.13.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling liblzma v0.3.6 [INFO] [stderr] Compiling zstd v0.13.3 [INFO] [stderr] Compiling needletail v0.6.3 [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 25.29s [INFO] running `Command { std: "docker" "inspect" "3e50cda5783ff04ba81f1963de665ea1ff32bbfb6e38b2f25fb5e573028b11be", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3e50cda5783ff04ba81f1963de665ea1ff32bbfb6e38b2f25fb5e573028b11be", kill_on_drop: false }` [INFO] [stdout] 3e50cda5783ff04ba81f1963de665ea1ff32bbfb6e38b2f25fb5e573028b11be [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] f22d2b95ffba0fd6afd213aeca57871cf3fc9cc488f5f5312fb6378348166713 [INFO] running `Command { std: "docker" "start" "-a" "f22d2b95ffba0fd6afd213aeca57871cf3fc9cc488f5f5312fb6378348166713", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/libradicl-ce99023eb30459f6) [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test chunk::tests::can_write_af_chunk ... ok [INFO] [stdout] test rad_types::tests::can_parse_array_tag_desc ... ok [INFO] [stdout] test header::tests::preludes_equal_with_different_chunks ... ok [INFO] [stdout] test header::tests::can_write_prelude ... ok [INFO] [stdout] test collation::tests::collation_manifest_roundtrip ... ok [INFO] [stdout] test chunk::tests::can_write_af_file ... ok [INFO] [stdout] test collation::tests::barcode_role_display_and_parse ... ok [INFO] [stdout] test rad_types::tests::can_parse_tag_values_from_section ... ok [INFO] [stdout] test rad_types::tests::map_tags_roundtrip ... ok [INFO] [stdout] test rad_types::tests::tag_value_rad_type_roundtrip ... ok [INFO] [stdout] test record::tests::can_write_af_record ... ok [INFO] [stdout] test record::tests::can_write_multi_barcode_record ... ok [INFO] [stdout] test record::tests::multi_barcode_collation_key_is_last_barcode ... ok [INFO] [stdout] test rad_types::tests::from_tag_values_roundtrip ... ok [INFO] [stdout] test rad_types::tests::can_parse_simple_tag_desc ... ok [INFO] [stdout] test record::tests::multi_barcode_header_grouping_key_includes_sample ... ok [INFO] [stdout] test tests::test_barcode_lookup_map ... ok [INFO] [stdout] test unmapped::tests::collated_multi_roundtrip ... ok [INFO] [stdout] test unmapped::tests::collated_single_roundtrip ... ok [INFO] [stdout] test unmapped::tests::empty_file ... ok [INFO] [stdout] test unmapped::tests::multi_barcode_roundtrip ... ok [INFO] [stdout] test unmapped::tests::single_barcode_roundtrip ... ok [INFO] [stdout] test writers::tests::chunk_buf_roundtrip ... ok [INFO] [stdout] test writers::tests::rad_file_writer_roundtrip ... ok [INFO] [stdout] test writers::tests::write_chunk_bytes_backpatch ... ok [INFO] [stdout] test writers::tests::concurrent_chunk_writer_roundtrip ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Doc-tests libradicl [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test src/writers.rs - writers (line 30) - compile ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] all doctests ran in 0.72s; merged doctests compilation took 0.70s [INFO] running `Command { std: "docker" "inspect" "f22d2b95ffba0fd6afd213aeca57871cf3fc9cc488f5f5312fb6378348166713", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f22d2b95ffba0fd6afd213aeca57871cf3fc9cc488f5f5312fb6378348166713", kill_on_drop: false }` [INFO] [stdout] f22d2b95ffba0fd6afd213aeca57871cf3fc9cc488f5f5312fb6378348166713