[INFO] fetching crate libnail 0.5.0... [INFO] testing libnail-0.5.0 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate libnail 0.5.0 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate libnail 0.5.0 [INFO] finished tweaking crates.io crate libnail 0.5.0 [INFO] tweaked toml for crates.io crate libnail 0.5.0 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate libnail 0.5.0 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate libnail 0.5.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rand_pcg v0.3.1 [INFO] [stderr] Downloaded scoped_threadpool v0.1.9 [INFO] [stderr] Downloaded avif-serialize v0.8.8 [INFO] [stderr] Downloaded zune-core v0.5.1 [INFO] [stderr] Downloaded ctor v0.4.3 [INFO] [stderr] Downloaded ctor-proc-macro v0.0.6 [INFO] [stderr] Downloaded assert2-macros v0.3.16 [INFO] [stderr] Downloaded ravif v0.13.0 [INFO] [stderr] Downloaded seq_io v0.3.4 [INFO] [stderr] Downloaded diff v0.1.13 [INFO] [stderr] Downloaded av1-grain v0.2.5 [INFO] [stderr] Downloaded bitstream-io v4.9.0 [INFO] [stderr] Downloaded cc v1.2.57 [INFO] [stderr] Downloaded tiff v0.11.3 [INFO] [stderr] Downloaded libfuzzer-sys v0.4.12 [INFO] [stderr] Downloaded zune-jpeg v0.5.14 [INFO] [stderr] Downloaded zerocopy-derive v0.8.47 [INFO] [stderr] Downloaded assert2 v0.3.16 [INFO] [stderr] Downloaded moxcms v0.8.1 [INFO] [stderr] Downloaded zerocopy v0.8.47 [INFO] [stderr] Downloaded gif v0.14.1 [INFO] [stderr] Downloaded core2 v0.4.0 [INFO] [stderr] Downloaded image v0.25.10 [INFO] [stderr] Downloaded built v0.8.0 [INFO] [stderr] Downloaded rgb v0.8.53 [INFO] [stderr] Downloaded datasize v0.2.15 [INFO] [stderr] Downloaded as-slice v0.2.1 [INFO] [stderr] Downloaded dtor-proc-macro v0.0.5 [INFO] [stderr] Downloaded dtor v0.0.6 [INFO] [stderr] Downloaded datasize_derive v0.2.15 [INFO] [stderr] Downloaded aligned v0.4.3 [INFO] [stderr] Downloaded y4m v0.8.0 [INFO] [stderr] Downloaded pastey v0.1.1 [INFO] [stderr] Downloaded av-scenechange v0.14.1 [INFO] [stderr] Downloaded buffer-redux v1.0.2 [INFO] [stderr] Downloaded pxfm v0.1.28 [INFO] [stderr] Downloaded rav1e v0.8.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 72b48cde08426e5348dd063779a5e577f6003f09f30f38db6d27513a4bcd34d6 [INFO] running `Command { std: "docker" "start" "-a" "72b48cde08426e5348dd063779a5e577f6003f09f30f38db6d27513a4bcd34d6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "72b48cde08426e5348dd063779a5e577f6003f09f30f38db6d27513a4bcd34d6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "72b48cde08426e5348dd063779a5e577f6003f09f30f38db6d27513a4bcd34d6", kill_on_drop: false }` [INFO] [stdout] 72b48cde08426e5348dd063779a5e577f6003f09f30f38db6d27513a4bcd34d6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ecc273e196bb3c0fe307050b2953079dbf8f22a51631a171af6e77e5f74154ae [INFO] running `Command { std: "docker" "start" "-a" "ecc273e196bb3c0fe307050b2953079dbf8f22a51631a171af6e77e5f74154ae", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.183 [INFO] [stderr] Compiling siphasher v1.0.2 [INFO] [stderr] Compiling zerocopy v0.8.47 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling scoped_threadpool v0.1.9 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling anyhow v1.0.102 [INFO] [stderr] Compiling regex-automata v0.4.14 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling phf_shared v0.11.3 [INFO] [stderr] Compiling phf_generator v0.11.3 [INFO] [stderr] Compiling getrandom v0.2.17 [INFO] [stderr] Compiling rand_pcg v0.3.1 [INFO] [stderr] Compiling regex v1.12.3 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling phf_macros v0.11.3 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling phf v0.11.3 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling datasize_derive v0.2.15 [INFO] [stderr] Compiling datasize v0.2.15 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling seq_io v0.3.4 [INFO] [stderr] Compiling libnail v0.5.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 8.44s [INFO] running `Command { std: "docker" "inspect" "ecc273e196bb3c0fe307050b2953079dbf8f22a51631a171af6e77e5f74154ae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ecc273e196bb3c0fe307050b2953079dbf8f22a51631a171af6e77e5f74154ae", kill_on_drop: false }` [INFO] [stdout] ecc273e196bb3c0fe307050b2953079dbf8f22a51631a171af6e77e5f74154ae [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4217a2f340254bd4c6b4ae99622626d731f76228ee03f154ffb47a62d6f54104 [INFO] running `Command { std: "docker" "start" "-a" "4217a2f340254bd4c6b4ae99622626d731f76228ee03f154ffb47a62d6f54104", kill_on_drop: false }` [INFO] [stderr] Compiling semver v1.0.27 [INFO] [stderr] Compiling object v0.37.3 [INFO] [stderr] Compiling adler2 v2.0.1 [INFO] [stderr] Compiling gimli v0.32.3 [INFO] [stderr] Compiling dtor-proc-macro v0.0.5 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling rustc-demangle v0.1.27 [INFO] [stderr] Compiling diff v0.1.13 [INFO] [stderr] Compiling ctor-proc-macro v0.0.6 [INFO] [stderr] Compiling termcolor v1.4.1 [INFO] [stderr] Compiling colored v3.1.1 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling rustc_version v0.4.1 [INFO] [stderr] Compiling dtor v0.0.6 [INFO] [stderr] Compiling ctor v0.4.3 [INFO] [stderr] Compiling assert2-macros v0.3.16 [INFO] [stderr] Compiling addr2line v0.25.1 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling phf_macros v0.11.3 [INFO] [stderr] Compiling backtrace v0.3.76 [INFO] [stderr] Compiling assert2 v0.3.16 [INFO] [stderr] Compiling phf v0.11.3 [INFO] [stderr] Compiling color-backtrace v0.7.2 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling seq_io v0.3.4 [INFO] [stderr] Compiling libnail v0.5.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unnecessary parentheses around closure body [INFO] [stdout] --> src/align/structs/dp_matrix.rs:1340:34 [INFO] [stdout] | [INFO] [stdout] 1340 | .flat_map(|(&a, &b)| ((a + 1)..b)) [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 1340 - .flat_map(|(&a, &b)| ((a + 1)..b)) [INFO] [stdout] 1340 + .flat_map(|(&a, &b)| (a + 1)..b ) [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unreachable expression [INFO] [stdout] --> src/structs/profile.rs:1383:9 [INFO] [stdout] | [INFO] [stdout] 1373 | todo!("fix this"); [INFO] [stdout] | ----------------- any code following this expression is unreachable [INFO] [stdout] ... [INFO] [stdout] 1383 | Ok(()) [INFO] [stdout] | ^^^^^^ unreachable expression [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unreachable_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `prf` [INFO] [stdout] --> src/structs/profile.rs:1365:13 [INFO] [stdout] | [INFO] [stdout] 1365 | let prf = Profile::from_blosum_62_and_seq(&seq)?; [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_prf` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `composition_corrrect` [INFO] [stdout] --> src/structs/profile.rs:1367:13 [INFO] [stdout] | [INFO] [stdout] 1367 | let composition_corrrect = [ [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_composition_corrrect` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `BOUNDS_D_1` is never used [INFO] [stdout] --> src/align/structs/cloud.rs:1441:15 [INFO] [stdout] | [INFO] [stdout] 1441 | pub const BOUNDS_D_1: [ArraySeqMajorBound; 5] = [ [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `BOUNDS_D_2` is never used [INFO] [stdout] --> src/align/structs/cloud.rs:1463:15 [INFO] [stdout] | [INFO] [stdout] 1463 | pub const BOUNDS_D_2: [ArraySeqMajorBound; 5] = [ [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `BOUNDS_D_MERGE` is never used [INFO] [stdout] --> src/align/structs/cloud.rs:1485:15 [INFO] [stdout] | [INFO] [stdout] 1485 | pub const BOUNDS_D_MERGE: [ArraySeqMajorBound; 17] = [ [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 15.43s [INFO] running `Command { std: "docker" "inspect" "4217a2f340254bd4c6b4ae99622626d731f76228ee03f154ffb47a62d6f54104", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4217a2f340254bd4c6b4ae99622626d731f76228ee03f154ffb47a62d6f54104", kill_on_drop: false }` [INFO] [stdout] 4217a2f340254bd4c6b4ae99622626d731f76228ee03f154ffb47a62d6f54104 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 0a305cc9b4412d7dfc03a6ada1575b21acd7470cd285b79eae1b17441c1b6d24 [INFO] running `Command { std: "docker" "start" "-a" "0a305cc9b4412d7dfc03a6ada1575b21acd7470cd285b79eae1b17441c1b6d24", kill_on_drop: false }` [INFO] [stderr] warning: unnecessary parentheses around closure body [INFO] [stderr] --> src/align/structs/dp_matrix.rs:1340:34 [INFO] [stderr] | [INFO] [stderr] 1340 | .flat_map(|(&a, &b)| ((a + 1)..b)) [INFO] [stderr] | ^ ^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] 1340 - .flat_map(|(&a, &b)| ((a + 1)..b)) [INFO] [stderr] 1340 + .flat_map(|(&a, &b)| (a + 1)..b ) [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unreachable expression [INFO] [stderr] --> src/structs/profile.rs:1383:9 [INFO] [stderr] | [INFO] [stderr] 1373 | todo!("fix this"); [INFO] [stderr] | ----------------- any code following this expression is unreachable [INFO] [stderr] ... [INFO] [stderr] 1383 | Ok(()) [INFO] [stderr] | ^^^^^^ unreachable expression [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unreachable_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `prf` [INFO] [stderr] --> src/structs/profile.rs:1365:13 [INFO] [stderr] | [INFO] [stderr] 1365 | let prf = Profile::from_blosum_62_and_seq(&seq)?; [INFO] [stderr] | ^^^ help: if this is intentional, prefix it with an underscore: `_prf` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `composition_corrrect` [INFO] [stderr] --> src/structs/profile.rs:1367:13 [INFO] [stderr] | [INFO] [stderr] 1367 | let composition_corrrect = [ [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_composition_corrrect` [INFO] [stderr] [INFO] [stderr] warning: constant `BOUNDS_D_1` is never used [INFO] [stderr] --> src/align/structs/cloud.rs:1441:15 [INFO] [stderr] | [INFO] [stderr] 1441 | pub const BOUNDS_D_1: [ArraySeqMajorBound; 5] = [ [INFO] [stderr] | ^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: constant `BOUNDS_D_2` is never used [INFO] [stderr] --> src/align/structs/cloud.rs:1463:15 [INFO] [stderr] | [INFO] [stderr] 1463 | pub const BOUNDS_D_2: [ArraySeqMajorBound; 5] = [ [INFO] [stderr] | ^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: constant `BOUNDS_D_MERGE` is never used [INFO] [stderr] --> src/align/structs/cloud.rs:1485:15 [INFO] [stderr] | [INFO] [stderr] 1485 | pub const BOUNDS_D_MERGE: [ArraySeqMajorBound; 17] = [ [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `libnail` (lib test) generated 7 warnings (run `cargo fix --lib -p libnail --tests` to apply 3 suggestions) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.15s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/libnail-66ddd478ccfc0d58) [INFO] [stdout] [INFO] [stdout] running 22 tests [INFO] [stdout] test align::scoring::test::test_bits_ops ... ok [INFO] [stdout] test align::structs::cloud::tests::test_advance_forward ... ok [INFO] [stdout] test align::structs::cloud::tests::test_advance_reverse ... ok [INFO] [stdout] test align::structs::cloud::tests::test_anti_diagonal_intersects ... ok [INFO] [stdout] test align::scoring::test::test_nats_ops ... ok [INFO] [stdout] test align::structs::cloud::tests::test_fill_square ... ok [INFO] [stdout] test align::structs::cloud::tests::test_bound_iter ... ok [INFO] [stdout] test align::structs::cloud::tests::test_cloud_relationship ... ok [INFO] [stdout] test align::structs::cloud::tests::test_square_corners ... ok [INFO] [stdout] test align::structs::cloud::tests::test_trim_wings ... ok [INFO] [stdout] test align::structs::cloud::tests::test_merge ... ok [INFO] [stdout] test align::structs::dp_matrix::tests::test_ad_matrix_quadratic ... ok [INFO] [stdout] test align::structs::dp_matrix::tests::test_ad_matrix_sparse_cloud ... ok [INFO] [stdout] test align::structs::dp_matrix::tests::test_ad_matrix_linear ... ok [INFO] [stdout] test align::structs::dp_matrix::tests::test_ad_matrix_sparse_square ... ok [INFO] [stdout] test align::structs::dp_matrix::tests::test_dp_matrix_sparse ... ok [INFO] [stdout] test align::structs::dp_matrix::tests::test_dp_matrix_flat ... ok [INFO] [stdout] test align::scoring::test::test_nats_bits_ops ... ok [INFO] [stdout] test align::scoring::test::test_nats_bits_conversion ... ok [INFO] [stderr] The application panicked (crashed). [INFO] [stderr] Message: not yet implemented: fix this [INFO] [stderr] Location: src/structs/profile.rs:1373 [INFO] [stderr] [INFO] [stderr] Run with COLORBT_SHOW_HIDDEN=1 environment variable to disable frame filtering. [INFO] [stdout] test structs::sequence::tests::test_random_amino ... ok [INFO] [stderr] ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ BACKTRACE ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ [INFO] [stderr] 1: color_backtrace[31e69fd9e1d7459e]::capture_backtrace [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/color-backtrace-0.7.2/src/lib.rs:230 [INFO] [stderr] 228 │ [INFO] [stderr] 229 │ #[cfg(all(feature = "use-backtrace-crate", not(feature = "use-btparse-crate")))] [INFO] [stderr] 230 > return Ok(Box::new(backtrace::Backtrace::new())); [INFO] [stderr] 231 │ [INFO] [stderr] 232 │ #[cfg(all(not(feature = "use-backtrace-crate"), feature = "use-btparse-crate"))] [INFO] [stderr] 2: ::print_panic_info::> [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/color-backtrace-0.7.2/src/lib.rs:885 [INFO] [stderr] 883 │ [INFO] [stderr] 884 │ if self.current_verbosity() >= Verbosity::Medium { [INFO] [stderr] 885 > match capture_backtrace() { [INFO] [stderr] 886 │ Ok(trace) => self.print_trace(&*trace, out)?, [INFO] [stderr] 887 │ Err(e) => { [INFO] [stderr] 3: ::into_panic_handler::>::{closure#0} [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/color-backtrace-0.7.2/src/lib.rs:752 [INFO] [stderr] 750 │ Box::new(move |pi| { [INFO] [stderr] 751 │ let mut lock = out_stream_mutex.lock().unwrap(); [INFO] [stderr] 752 > if let Err(e) = self.print_panic_info(pi, &mut *lock) { [INFO] [stderr] 753 │ // Panicking while handling a panic would send us into a deadlock, [INFO] [stderr] 754 │ // so we just print the error to stderr instead. [INFO] [stderr] 4: core[fa0eadad68403074]::ops::function::Fn<(&'a std[31e582c13f4e914f]::panic::PanicHookInfo<'b>,), Output = ()> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::Fn<(&std[31e582c13f4e914f]::panic::PanicHookInfo,)>>::call [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2254 [INFO] [stderr] 5: test[7530e63dc052480e]::test_main_with_exit_callback::::{closure#0} [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:145 [INFO] [stderr] 6: core[fa0eadad68403074]::ops::function::Fn<(&'a std[31e582c13f4e914f]::panic::PanicHookInfo<'b>,), Output = ()> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::Fn<(&std[31e582c13f4e914f]::panic::PanicHookInfo,)>>::call [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2254 [INFO] [stderr] 7: std[31e582c13f4e914f]::panicking::panic_with_hook [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:833 [INFO] [stderr] 8: std[31e582c13f4e914f]::panicking::panic_handler::{closure#0} [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:691 [INFO] [stderr] 9: std[31e582c13f4e914f]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:182 [INFO] [stderr] 10: __rustc[fc8e3a9f23f26cb]::rust_begin_unwind [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:689 [INFO] [stderr] 11: core[fa0eadad68403074]::panicking::panic_fmt [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panicking.rs:80 [INFO] [stderr] 12: libnail[3b8a51482029276d]::structs::profile::tests::test_hmm_from_blosum62 [INFO] [stderr] at /opt/rustwide/workdir/src/structs/profile.rs:1373 [INFO] [stderr] 1371 │ ]; [INFO] [stderr] 1372 │ [INFO] [stderr] 1373 > todo!("fix this"); [INFO] [stderr] 1374 │ // hmm.model [INFO] [stderr] 1375 │ // .composition [INFO] [stderr] 13: libnail[3b8a51482029276d]::structs::profile::tests::test_hmm_from_blosum62::{closure#0} [INFO] [stderr] at /opt/rustwide/workdir/src/structs/profile.rs:1352 [INFO] [stderr] 1350 │ [INFO] [stderr] 1351 │ #[test] [INFO] [stderr] 1352 > fn test_hmm_from_blosum62() -> anyhow::Result<()> { [INFO] [stderr] 1353 │ let mut seq = Sequence::from_utf8( [INFO] [stderr] 1354 │ concat!( [INFO] [stderr] 14: >::call_once [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250 [INFO] [stderr] 15: core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250 [INFO] [stderr] 16: test[7530e63dc052480e]::__rust_begin_short_backtrace::, fn() -> core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:663 [INFO] [stderr] 17: test[7530e63dc052480e]::run_test_in_process::{closure#0} [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:686 [INFO] [stderr] 18: as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panic/unwind_safe.rs:275 [INFO] [stderr] 19: std[31e582c13f4e914f]::panicking::catch_unwind::do_call::, core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581 [INFO] [stderr] 20: std[31e582c13f4e914f]::panicking::catch_unwind::, core[fa0eadad68403074]::panic::unwind_safe::AssertUnwindSafe> [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544 [INFO] [stderr] 21: std[31e582c13f4e914f]::panic::catch_unwind::, core[fa0eadad68403074]::result::Result<(), alloc[49b8922c36ca62de]::string::String>> [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359 [INFO] [stderr] 22: test[7530e63dc052480e]::run_test_in_process [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:686 [INFO] [stderr] 23: test[7530e63dc052480e]::run_test::{closure#0} [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:607 [INFO] [stderr] 24: test[7530e63dc052480e]::run_test::{closure#1} [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/test/src/lib.rs:637 [INFO] [stderr] 25: std[31e582c13f4e914f]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:166 [INFO] [stderr] 26: std[31e582c13f4e914f]::thread::lifecycle::spawn_unchecked::::{closure#1}::{closure#0} [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/thread/lifecycle.rs:91 [INFO] [stderr] 27: ::{closure#1}::{closure#0}> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panic/unwind_safe.rs:275 [INFO] [stderr] 28: std[31e582c13f4e914f]::panicking::catch_unwind::do_call::::{closure#1}::{closure#0}>, ()> [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581 [INFO] [stderr] 29: std[31e582c13f4e914f]::panicking::catch_unwind::<(), core[fa0eadad68403074]::panic::unwind_safe::AssertUnwindSafe::{closure#1}::{closure#0}>> [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544 [INFO] [stderr] 30: std[31e582c13f4e914f]::panic::catch_unwind::::{closure#1}::{closure#0}>, ()> [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359 [INFO] [stderr] 31: std[31e582c13f4e914f]::thread::lifecycle::spawn_unchecked::::{closure#1} [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/thread/lifecycle.rs:89 [INFO] [stderr] 32: ::{closure#1} as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:250 [INFO] [stderr] 33: + core[fa0eadad68403074]::marker::Send> as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/alloc/src/boxed.rs:2240 [INFO] [stdout] test structs::profile::tests::test_hmm_from_blosum62 ... FAILED [INFO] [stderr] 34: ::new::thread_start [INFO] [stderr] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/thread/unix.rs:118 [INFO] [stderr] 35: clone [INFO] [stderr] at [INFO] [stdout] test structs::profile::tests::test_calibrate_tau ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] structs::profile::tests::test_hmm_from_blosum62 [INFO] [stdout] [INFO] [stdout] test result: FAILED. 21 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.50s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "0a305cc9b4412d7dfc03a6ada1575b21acd7470cd285b79eae1b17441c1b6d24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0a305cc9b4412d7dfc03a6ada1575b21acd7470cd285b79eae1b17441c1b6d24", kill_on_drop: false }` [INFO] [stdout] 0a305cc9b4412d7dfc03a6ada1575b21acd7470cd285b79eae1b17441c1b6d24