[INFO] fetching crate fasta 0.1.3... [INFO] testing fasta-0.1.3 against master#562dee4820c458d823175268e41601d4c060588a for pr-154210-1 [INFO] extracting crate fasta 0.1.3 into /workspace/builds/worker-1-tc1/source [INFO] started tweaking crates.io crate fasta 0.1.3 [INFO] finished tweaking crates.io crate fasta 0.1.3 [INFO] tweaked toml for crates.io crate fasta 0.1.3 written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate fasta 0.1.3 on toolchain 562dee4820c458d823175268e41601d4c060588a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 17 packages to latest compatible versions [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 54044f9e0c88a5b4c330aac1030d1f5fc5b1d09ba9c0039fbd0fbf25769d92ce [INFO] running `Command { std: "docker" "start" "-a" "54044f9e0c88a5b4c330aac1030d1f5fc5b1d09ba9c0039fbd0fbf25769d92ce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "54044f9e0c88a5b4c330aac1030d1f5fc5b1d09ba9c0039fbd0fbf25769d92ce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "54044f9e0c88a5b4c330aac1030d1f5fc5b1d09ba9c0039fbd0fbf25769d92ce", kill_on_drop: false }` [INFO] [stdout] 54044f9e0c88a5b4c330aac1030d1f5fc5b1d09ba9c0039fbd0fbf25769d92ce [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 58722d8ddf5efc109a4af0ce94eabe23a7b28c82517ff0b7e959074cb54f0b2a [INFO] running `Command { std: "docker" "start" "-a" "58722d8ddf5efc109a4af0ce94eabe23a7b28c82517ff0b7e959074cb54f0b2a", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.106 [INFO] [stderr] Compiling quote v1.0.45 [INFO] [stderr] Compiling memchr v2.8.0 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling fasta v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 4.93s [INFO] running `Command { std: "docker" "inspect" "58722d8ddf5efc109a4af0ce94eabe23a7b28c82517ff0b7e959074cb54f0b2a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "58722d8ddf5efc109a4af0ce94eabe23a7b28c82517ff0b7e959074cb54f0b2a", kill_on_drop: false }` [INFO] [stdout] 58722d8ddf5efc109a4af0ce94eabe23a7b28c82517ff0b7e959074cb54f0b2a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3f1fd4d0e511867e1fb8ec868d02b7fb818b60851eac962052cb8b037ee3b0f3 [INFO] running `Command { std: "docker" "start" "-a" "3f1fd4d0e511867e1fb8ec868d02b7fb818b60851eac962052cb8b037ee3b0f3", kill_on_drop: false }` [INFO] [stderr] Compiling fasta v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.52s [INFO] running `Command { std: "docker" "inspect" "3f1fd4d0e511867e1fb8ec868d02b7fb818b60851eac962052cb8b037ee3b0f3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3f1fd4d0e511867e1fb8ec868d02b7fb818b60851eac962052cb8b037ee3b0f3", kill_on_drop: false }` [INFO] [stdout] 3f1fd4d0e511867e1fb8ec868d02b7fb818b60851eac962052cb8b037ee3b0f3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+562dee4820c458d823175268e41601d4c060588a" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 7715572f707ddc9243bc5a94de82b3b1a09e461efe32598c02a9ba36f44c103d [INFO] running `Command { std: "docker" "start" "-a" "7715572f707ddc9243bc5a94de82b3b1a09e461efe32598c02a9ba36f44c103d", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.05s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/fasta-f3060edb37360bf1) [INFO] [stdout] [INFO] [stdout] running 10 tests [INFO] [stdout] test helpers::tests::seq_id_long_descr ... ok [INFO] [stdout] test helpers::tests::seq_id_short_descr ... ok [INFO] [stdout] test index::tests::index_building ... ok [INFO] [stdout] test map::tests::fasta_map_from_fasta ... ok [INFO] [stdout] test pieces::tests::accessions_from_fasta_long ... ok [INFO] [stdout] test pieces::tests::lengths_from_fasta ... ok [INFO] [stdout] test pieces::tests::accessions_from_fasta_short ... ok [INFO] [stdout] test index::tests::indexed_reading ... ok [INFO] [stdout] test index::tests::individual_entry_from_index ... ok [INFO] [stdout] test pieces::tests::get_single_fasta_entry ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests fasta [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test src/read.rs - read::FastaReader (line 63) ... ok [INFO] [stdout] test src/index.rs - index::FastaIndex (line 25) ... FAILED [INFO] [stdout] test src/pieces.rs - pieces::FastaLengths (line 68) ... FAILED [INFO] [stdout] test src/pieces.rs - pieces::FastaAccessions (line 24) ... FAILED [INFO] [stdout] test src/pieces.rs - pieces::FastaEntry (line 124) ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- src/index.rs - index::FastaIndex (line 25) stdout ---- [INFO] [stdout] Test executable failed (exit status: 101). [INFO] [stdout] [INFO] [stdout] stderr: [INFO] [stdout] [INFO] [stdout] thread 'main' (146) panicked at src/index.rs:11:52: [INFO] [stdout] Failed to dump json.: Os { code: 30, kind: ReadOnlyFilesystem, message: "Read-only file system" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x651a9055f36a - std[31e582c13f4e914f]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x651a9055f36a - std[31e582c13f4e914f]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x651a9055f36a - std[31e582c13f4e914f]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x651a9055f36a - <::print::DisplayBacktrace as core[fa0eadad68403074]::fmt::Display>::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x651a90571a5a - ::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x651a90571a5a - core[fa0eadad68403074]::fmt::write [INFO] [stdout] 6: 0x651a90562cb2 - std[31e582c13f4e914f]::io::default_write_fmt:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x651a90562cb2 - ::write_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x651a9054a6ef - ::print [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:47:9 [INFO] [stdout] 9: 0x651a9054a6ef - std[31e582c13f4e914f]::panicking::default_hook::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:292:27 [INFO] [stdout] 10: 0x651a9055af61 - std[31e582c13f4e914f]::panicking::default_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:319:9 [INFO] [stdout] 11: 0x651a9055b11b - std[31e582c13f4e914f]::panicking::panic_with_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:825:13 [INFO] [stdout] 12: 0x651a9054a7a8 - std[31e582c13f4e914f]::panicking::panic_handler::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:698:13 [INFO] [stdout] 13: 0x651a9053fb49 - std[31e582c13f4e914f]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:182:18 [INFO] [stdout] 14: 0x651a9054b08d - __rustc[fc8e3a9f23f26cb]::rust_begin_unwind [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:689:5 [INFO] [stdout] 15: 0x651a905721ec - core[fa0eadad68403074]::panicking::panic_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panicking.rs:80:14 [INFO] [stdout] 16: 0x651a90571f62 - core[fa0eadad68403074]::result::unwrap_failed [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/result.rs:1867:5 [INFO] [stdout] 17: 0x651a904dadd0 - >::expect [INFO] [stdout] 18: 0x651a904daee4 - rust_out[6ca516bbe19c3985]::main::_doctest_main_src_index_rs_25_0 [INFO] [stdout] 19: 0x651a904dad66 - rust_out[6ca516bbe19c3985]::main [INFO] [stdout] 20: 0x651a904db2b3 - >::call_once [INFO] [stdout] 21: 0x651a904daba6 - std[31e582c13f4e914f]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] 22: 0x651a904dace9 - std[31e582c13f4e914f]::rt::lang_start::<()>::{closure#0} [INFO] [stdout] 23: 0x651a9055a6e4 - <&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:287:21 [INFO] [stdout] 24: 0x651a9055a6e4 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::<&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe, i32> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 25: 0x651a9055a6e4 - std[31e582c13f4e914f]::panicking::catch_unwind:: + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 26: 0x651a9055a6e4 - std[31e582c13f4e914f]::panic::catch_unwind::<&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe, i32> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 27: 0x651a9055a6e4 - std[31e582c13f4e914f]::rt::lang_start_internal::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/rt.rs:175:24 [INFO] [stdout] 28: 0x651a9055a6e4 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 29: 0x651a9055a6e4 - std[31e582c13f4e914f]::panicking::catch_unwind:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 30: 0x651a9055a6e4 - std[31e582c13f4e914f]::panic::catch_unwind:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x651a9055a6e4 - std[31e582c13f4e914f]::rt::lang_start_internal [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/rt.rs:171:5 [INFO] [stdout] 32: 0x651a904dab51 - std[31e582c13f4e914f]::rt::lang_start::<()> [INFO] [stdout] 33: 0x651a904db315 - main [INFO] [stdout] 34: 0x71c8981eb1ca - [INFO] [stdout] 35: 0x71c8981eb28b - __libc_start_main [INFO] [stdout] 36: 0x651a904da8a5 - _start [INFO] [stdout] 37: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] ---- src/pieces.rs - pieces::FastaLengths (line 68) stdout ---- [INFO] [stdout] Test executable failed (exit status: 101). [INFO] [stdout] [INFO] [stdout] stderr: [INFO] [stdout] [INFO] [stdout] thread 'main' (147) panicked at src/pieces.rs:11:59: [INFO] [stdout] JSON dump failed: Os { code: 30, kind: ReadOnlyFilesystem, message: "Read-only file system" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5e890d801bea - std[31e582c13f4e914f]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5e890d801bea - std[31e582c13f4e914f]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5e890d801bea - std[31e582c13f4e914f]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x5e890d801bea - <::print::DisplayBacktrace as core[fa0eadad68403074]::fmt::Display>::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x5e890d812cfa - ::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x5e890d812cfa - core[fa0eadad68403074]::fmt::write [INFO] [stdout] 6: 0x5e890d8056e2 - std[31e582c13f4e914f]::io::default_write_fmt:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5e890d8056e2 - ::write_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x5e890d7ed2bf - ::print [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:47:9 [INFO] [stdout] 9: 0x5e890d7ed2bf - std[31e582c13f4e914f]::panicking::default_hook::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:292:27 [INFO] [stdout] 10: 0x5e890d7fdb31 - std[31e582c13f4e914f]::panicking::default_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:319:9 [INFO] [stdout] 11: 0x5e890d7fdceb - std[31e582c13f4e914f]::panicking::panic_with_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:825:13 [INFO] [stdout] 12: 0x5e890d7ed378 - std[31e582c13f4e914f]::panicking::panic_handler::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:698:13 [INFO] [stdout] 13: 0x5e890d7e2839 - std[31e582c13f4e914f]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:182:18 [INFO] [stdout] 14: 0x5e890d7edc5d - __rustc[fc8e3a9f23f26cb]::rust_begin_unwind [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:689:5 [INFO] [stdout] 15: 0x5e890d81344c - core[fa0eadad68403074]::panicking::panic_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panicking.rs:80:14 [INFO] [stdout] 16: 0x5e890d8131c2 - core[fa0eadad68403074]::result::unwrap_failed [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/result.rs:1867:5 [INFO] [stdout] 17: 0x5e890d79eed0 - >::expect [INFO] [stdout] 18: 0x5e890d79efb9 - rust_out[6ca516bbe19c3985]::main::_doctest_main_src_pieces_rs_68_0 [INFO] [stdout] 19: 0x5e890d79ee66 - rust_out[6ca516bbe19c3985]::main [INFO] [stdout] 20: 0x5e890d79f003 - >::call_once [INFO] [stdout] 21: 0x5e890d79ee26 - std[31e582c13f4e914f]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] 22: 0x5e890d79ee39 - std[31e582c13f4e914f]::rt::lang_start::<()>::{closure#0} [INFO] [stdout] 23: 0x5e890d7fd2b4 - <&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:287:21 [INFO] [stdout] 24: 0x5e890d7fd2b4 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::<&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe, i32> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 25: 0x5e890d7fd2b4 - std[31e582c13f4e914f]::panicking::catch_unwind:: + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 26: 0x5e890d7fd2b4 - std[31e582c13f4e914f]::panic::catch_unwind::<&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe, i32> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 27: 0x5e890d7fd2b4 - std[31e582c13f4e914f]::rt::lang_start_internal::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/rt.rs:175:24 [INFO] [stdout] 28: 0x5e890d7fd2b4 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 29: 0x5e890d7fd2b4 - std[31e582c13f4e914f]::panicking::catch_unwind:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 30: 0x5e890d7fd2b4 - std[31e582c13f4e914f]::panic::catch_unwind:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x5e890d7fd2b4 - std[31e582c13f4e914f]::rt::lang_start_internal [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/rt.rs:171:5 [INFO] [stdout] 32: 0x5e890d79ee01 - std[31e582c13f4e914f]::rt::lang_start::<()> [INFO] [stdout] 33: 0x5e890d79f065 - main [INFO] [stdout] 34: 0x7fac821341ca - [INFO] [stdout] 35: 0x7fac8213428b - __libc_start_main [INFO] [stdout] 36: 0x5e890d79ed05 - _start [INFO] [stdout] 37: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] ---- src/pieces.rs - pieces::FastaAccessions (line 24) stdout ---- [INFO] [stdout] Test executable failed (exit status: 101). [INFO] [stdout] [INFO] [stdout] stderr: [INFO] [stdout] [INFO] [stdout] thread 'main' (151) panicked at src/pieces.rs:11:61: [INFO] [stdout] Dumping tsv failed: Os { code: 30, kind: ReadOnlyFilesystem, message: "Read-only file system" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x577240769cca - std[31e582c13f4e914f]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x577240769cca - std[31e582c13f4e914f]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x577240769cca - std[31e582c13f4e914f]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x577240769cca - <::print::DisplayBacktrace as core[fa0eadad68403074]::fmt::Display>::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x57724077b07a - ::fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x57724077b07a - core[fa0eadad68403074]::fmt::write [INFO] [stdout] 6: 0x57724076d722 - std[31e582c13f4e914f]::io::default_write_fmt:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x57724076d722 - ::write_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x577240755b2f - ::print [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:47:9 [INFO] [stdout] 9: 0x577240755b2f - std[31e582c13f4e914f]::panicking::default_hook::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:292:27 [INFO] [stdout] 10: 0x577240766221 - std[31e582c13f4e914f]::panicking::default_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:319:9 [INFO] [stdout] 11: 0x5772407663db - std[31e582c13f4e914f]::panicking::panic_with_hook [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:825:13 [INFO] [stdout] 12: 0x577240755be8 - std[31e582c13f4e914f]::panicking::panic_handler::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:698:13 [INFO] [stdout] 13: 0x57724074b1a9 - std[31e582c13f4e914f]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/sys/backtrace.rs:182:18 [INFO] [stdout] 14: 0x5772407563cd - __rustc[fc8e3a9f23f26cb]::rust_begin_unwind [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:689:5 [INFO] [stdout] 15: 0x57724077b7cc - core[fa0eadad68403074]::panicking::panic_fmt [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/panicking.rs:80:14 [INFO] [stdout] 16: 0x57724077b542 - core[fa0eadad68403074]::result::unwrap_failed [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/result.rs:1867:5 [INFO] [stdout] 17: 0x577240710c80 - >::expect [INFO] [stdout] 18: 0x577240710d6b - rust_out[6ca516bbe19c3985]::main::_doctest_main_src_pieces_rs_24_0 [INFO] [stdout] 19: 0x577240710c16 - rust_out[6ca516bbe19c3985]::main [INFO] [stdout] 20: 0x577240710db3 - >::call_once [INFO] [stdout] 21: 0x577240710bd6 - std[31e582c13f4e914f]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] 22: 0x577240710be9 - std[31e582c13f4e914f]::rt::lang_start::<()>::{closure#0} [INFO] [stdout] 23: 0x5772407659a4 - <&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe as core[fa0eadad68403074]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/core/src/ops/function.rs:287:21 [INFO] [stdout] 24: 0x5772407659a4 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call::<&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe, i32> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 25: 0x5772407659a4 - std[31e582c13f4e914f]::panicking::catch_unwind:: + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 26: 0x5772407659a4 - std[31e582c13f4e914f]::panic::catch_unwind::<&dyn core[fa0eadad68403074]::ops::function::Fn<(), Output = i32> + core[fa0eadad68403074]::marker::Sync + core[fa0eadad68403074]::panic::unwind_safe::RefUnwindSafe, i32> [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 27: 0x5772407659a4 - std[31e582c13f4e914f]::rt::lang_start_internal::{closure#0} [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/rt.rs:175:24 [INFO] [stdout] 28: 0x5772407659a4 - std[31e582c13f4e914f]::panicking::catch_unwind::do_call:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:581:40 [INFO] [stdout] 29: 0x5772407659a4 - std[31e582c13f4e914f]::panicking::catch_unwind:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panicking.rs:544:19 [INFO] [stdout] 30: 0x5772407659a4 - std[31e582c13f4e914f]::panic::catch_unwind:: [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x5772407659a4 - std[31e582c13f4e914f]::rt::lang_start_internal [INFO] [stdout] at /rustc/562dee4820c458d823175268e41601d4c060588a/library/std/src/rt.rs:171:5 [INFO] [stdout] 32: 0x577240710bb1 - std[31e582c13f4e914f]::rt::lang_start::<()> [INFO] [stdout] 33: 0x577240710e15 - main [INFO] [stdout] 34: 0x783704c9d1ca - [INFO] [stdout] 35: 0x783704c9d28b - __libc_start_main [INFO] [stdout] 36: 0x577240710ab5 - _start [INFO] [stdout] 37: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] src/index.rs - index::FastaIndex (line 25) [INFO] [stdout] src/pieces.rs - pieces::FastaAccessions (line 24) [INFO] [stdout] src/pieces.rs - pieces::FastaLengths (line 68) [INFO] [stderr] error: doctest failed, to rerun pass `--doc` [INFO] [stdout] [INFO] [stdout] test result: FAILED. 2 passed; 3 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.50s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "7715572f707ddc9243bc5a94de82b3b1a09e461efe32598c02a9ba36f44c103d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7715572f707ddc9243bc5a94de82b3b1a09e461efe32598c02a9ba36f44c103d", kill_on_drop: false }` [INFO] [stdout] 7715572f707ddc9243bc5a94de82b3b1a09e461efe32598c02a9ba36f44c103d