[INFO] fetching crate seqwish 0.1.3... [INFO] checking seqwish-0.1.3 against master#8a703520e80d87d4423c01f9d4fbc9e5f6533a02 for pr-154205-1 [INFO] extracting crate seqwish 0.1.3 into /workspace/builds/worker-4-tc1/source [INFO] removed /workspace/builds/worker-4-tc1/source/.cargo/config.toml [INFO] started tweaking crates.io crate seqwish 0.1.3 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate seqwish 0.1.3 [INFO] tweaked toml for crates.io crate seqwish 0.1.3 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate seqwish 0.1.3 on toolchain 8a703520e80d87d4423c01f9d4fbc9e5f6533a02 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8a703520e80d87d4423c01f9d4fbc9e5f6533a02" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate seqwish 0.1.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8a703520e80d87d4423c01f9d4fbc9e5f6533a02" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded nanorand v0.6.1 [INFO] [stderr] Downloaded sucds v0.8.3 [INFO] [stderr] Downloaded block-pseudorand v0.1.2 [INFO] [stderr] Downloaded arbitrary-chunks v0.4.1 [INFO] [stderr] Downloaded iitree-rs v0.1.1 [INFO] [stderr] Downloaded chiapos-chacha8 v0.1.0 [INFO] [stderr] Downloaded uf_rush v0.1.1 [INFO] [stderr] Downloaded rdst v0.20.14 [INFO] [stderr] Downloaded partition v0.1.2 [INFO] [stderr] Downloaded fm-index v0.3.0 [INFO] [stderr] Downloaded cc v1.2.44 [INFO] [stderr] Downloaded vers-vecs v1.8.1 [INFO] [stderr] Downloaded cbindgen v0.27.0 [INFO] [stderr] Downloaded voracious_radix_sort v1.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+8a703520e80d87d4423c01f9d4fbc9e5f6533a02" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4fe39948d70f6b46d30faab68411e78f553e6c4e8f0158d401d2b60fabc6eb8a [INFO] running `Command { std: "docker" "start" "-a" "4fe39948d70f6b46d30faab68411e78f553e6c4e8f0158d401d2b60fabc6eb8a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4fe39948d70f6b46d30faab68411e78f553e6c4e8f0158d401d2b60fabc6eb8a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4fe39948d70f6b46d30faab68411e78f553e6c4e8f0158d401d2b60fabc6eb8a", kill_on_drop: false }` [INFO] [stdout] 4fe39948d70f6b46d30faab68411e78f553e6c4e8f0158d401d2b60fabc6eb8a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+8a703520e80d87d4423c01f9d4fbc9e5f6533a02" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ec2b96bf506fc3ee92840f4432e3142823568c49ea72241ae14acdc5b4e8a21b [INFO] running `Command { std: "docker" "start" "-a" "ec2b96bf506fc3ee92840f4432e3142823568c49ea72241ae14acdc5b4e8a21b", kill_on_drop: false }` [INFO] [stderr] Compiling quote v1.0.41 [INFO] [stderr] Compiling libc v0.2.177 [INFO] [stderr] Compiling utf8parse v0.2.2 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling colorchoice v1.0.4 [INFO] [stderr] Compiling hashbrown v0.16.0 [INFO] [stderr] Compiling anstyle v1.0.13 [INFO] [stderr] Compiling is_terminal_polyfill v1.70.2 [INFO] [stderr] Compiling anstyle-parse v0.2.7 [INFO] [stderr] Compiling anstyle-query v1.1.4 [INFO] [stderr] Compiling getrandom v0.3.4 [INFO] [stderr] Compiling rustix v1.1.2 [INFO] [stderr] Compiling clap_lex v0.7.6 [INFO] [stderr] Compiling winnow v0.7.13 [INFO] [stderr] Compiling anstream v0.6.21 [INFO] [stderr] Compiling linux-raw-sys v0.11.0 [INFO] [stderr] Compiling bitflags v2.10.0 [INFO] [stderr] Compiling serde_json v1.0.145 [INFO] [stderr] Compiling fastrand v2.3.0 [INFO] [stderr] Compiling clap_builder v4.5.51 [INFO] [stderr] Compiling syn v2.0.108 [INFO] [stderr] Compiling indexmap v2.12.0 [INFO] [stderr] Compiling ryu v1.0.20 [INFO] [stderr] Compiling cbindgen v0.27.0 [INFO] [stderr] Compiling itoa v1.0.15 [INFO] [stderr] Compiling once_cell v1.21.3 [INFO] [stderr] Compiling log v0.4.28 [INFO] [stderr] Compiling radium v0.7.0 [INFO] [stderr] Checking crossbeam-queue v0.3.12 [INFO] [stderr] Checking crossbeam-channel v0.5.15 [INFO] [stderr] Compiling portable-atomic v1.11.1 [INFO] [stderr] Checking tap v1.0.1 [INFO] [stderr] Checking crossbeam v0.8.4 [INFO] [stderr] Checking wyz v0.5.1 [INFO] [stderr] Checking parking_lot_core v0.9.12 [INFO] [stderr] Compiling tempfile v3.23.0 [INFO] [stderr] Compiling clap v4.5.51 [INFO] [stderr] Checking memmap2 v0.9.9 [INFO] [stderr] Checking arbitrary-chunks v0.4.1 [INFO] [stderr] Checking partition v0.1.2 [INFO] [stderr] Checking funty v2.0.0 [INFO] [stderr] Checking iitree-rs v0.1.1 [INFO] [stderr] Checking rdst v0.20.14 [INFO] [stderr] Checking parking_lot v0.12.5 [INFO] [stderr] Checking sucds v0.8.3 [INFO] [stderr] Checking flate2 v1.1.5 [INFO] [stderr] Checking bitvec v1.0.1 [INFO] [stderr] Checking uf_rush v0.1.1 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling clap_derive v4.5.49 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling serde_spanned v0.6.9 [INFO] [stderr] Compiling toml_datetime v0.6.11 [INFO] [stderr] Checking vers-vecs v1.8.1 [INFO] [stderr] Compiling toml_edit v0.22.27 [INFO] [stderr] Checking fm-index v0.3.0 [INFO] [stderr] Compiling toml v0.8.23 [INFO] [stderr] Compiling seqwish v0.1.3 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/transclosure.rs:201:5 [INFO] [stdout] | [INFO] [stdout] 201 | node_iitree.add(match_start_in_s, match_end_in_s, match_pos_in_q); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: `#[warn(unused_must_use)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 201 | let _ = node_iitree.add(match_start_in_s, match_end_in_s, match_pos_in_q); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/transclosure.rs:202:5 [INFO] [stdout] | [INFO] [stdout] 202 | path_iitree.add(match_start_in_q, match_end_in_q, match_pos_in_s); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 202 | let _ = path_iitree.add(match_start_in_q, match_end_in_q, match_pos_in_s); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Write` [INFO] [stdout] --> src/main.rs:7:32 [INFO] [stdout] | [INFO] [stdout] 7 | use std::io::{self, BufWriter, Write}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/transclosure.rs:201:5 [INFO] [stdout] | [INFO] [stdout] 201 | node_iitree.add(match_start_in_s, match_end_in_s, match_pos_in_q); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: `#[warn(unused_must_use)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 201 | let _ = node_iitree.add(match_start_in_s, match_end_in_s, match_pos_in_q); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/transclosure.rs:202:5 [INFO] [stdout] | [INFO] [stdout] 202 | path_iitree.add(match_start_in_q, match_end_in_q, match_pos_in_s); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 202 | let _ = path_iitree.add(match_start_in_q, match_end_in_q, match_pos_in_s); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Write` [INFO] [stdout] --> src/main.rs:7:32 [INFO] [stdout] | [INFO] [stdout] 7 | use std::io::{self, BufWriter, Write}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `cigar_to_string` is never used [INFO] [stdout] --> src/cigar.rs:47:8 [INFO] [stdout] | [INFO] [stdout] 47 | pub fn cigar_to_string(cigar: &[CigarOp]) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `reverse_complement` is never used [INFO] [stdout] --> src/dna.rs:46:8 [INFO] [stdout] | [INFO] [stdout] 46 | pub fn reverse_complement(seq: &[u8]) -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `reverse_complement_in_place` is never used [INFO] [stdout] --> src/dna.rs:54:8 [INFO] [stdout] | [INFO] [stdout] 54 | pub fn reverse_complement_in_place(seq: &mut [u8]) { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `DisjointSets` is never constructed [INFO] [stdout] --> src/dset64.rs:13:12 [INFO] [stdout] | [INFO] [stdout] 13 | pub struct DisjointSets { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `PARENT_MASK` is never used [INFO] [stdout] --> src/dset64.rs:19:7 [INFO] [stdout] | [INFO] [stdout] 19 | const PARENT_MASK: u128 = u64::MAX as u128; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `RANK_MASK` is never used [INFO] [stdout] --> src/dset64.rs:20:7 [INFO] [stdout] | [INFO] [stdout] 20 | const RANK_MASK: u128 = (u64::MAX as u128) << 64; [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple associated items are never used [INFO] [stdout] --> src/dset64.rs:25:12 [INFO] [stdout] | [INFO] [stdout] 22 | impl DisjointSets { [INFO] [stdout] | ----------------- associated items in this implementation [INFO] [stdout] ... [INFO] [stdout] 25 | pub fn new(size: usize) -> Self { [INFO] [stdout] | ^^^ [INFO] [stdout] ... [INFO] [stdout] 40 | pub fn find(&self, mut id: usize) -> usize { [INFO] [stdout] | ^^^^ [INFO] [stdout] ... [INFO] [stdout] 63 | pub fn same(&self, mut id1: usize, mut id2: usize) -> bool { [INFO] [stdout] | ^^^^ [INFO] [stdout] ... [INFO] [stdout] 80 | pub fn unite(&self, mut id1: usize, mut id2: usize) -> usize { [INFO] [stdout] | ^^^^^ [INFO] [stdout] ... [INFO] [stdout] 129 | pub fn size(&self) -> usize { [INFO] [stdout] | ^^^^ [INFO] [stdout] ... [INFO] [stdout] 135 | fn rank(&self, id: usize) -> u64 { [INFO] [stdout] | ^^^^ [INFO] [stdout] ... [INFO] [stdout] 141 | fn parent(&self, id: usize) -> usize { [INFO] [stdout] | ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `size` is never used [INFO] [stdout] --> src/dset64_asm.rs:122:12 [INFO] [stdout] | [INFO] [stdout] 22 | impl DisjointSetsAsm { [INFO] [stdout] | -------------------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 122 | pub fn size(&self) -> usize { [INFO] [stdout] | ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `DisjointSetsUnsafe` is never constructed [INFO] [stdout] --> src/dset64_unsafe.rs:8:12 [INFO] [stdout] | [INFO] [stdout] 8 | pub struct DisjointSetsUnsafe { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `PARENT_MASK` is never used [INFO] [stdout] --> src/dset64_unsafe.rs:13:7 [INFO] [stdout] | [INFO] [stdout] 13 | const PARENT_MASK: u128 = u64::MAX as u128; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `RANK_MASK` is never used [INFO] [stdout] --> src/dset64_unsafe.rs:14:7 [INFO] [stdout] | [INFO] [stdout] 14 | const RANK_MASK: u128 = (u64::MAX as u128) << 64; [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated items `new`, `find`, `unite`, `size`, `rank_unchecked`, and `parent_unchecked` are never used [INFO] [stdout] --> src/dset64_unsafe.rs:21:12 [INFO] [stdout] | [INFO] [stdout] 19 | impl DisjointSetsUnsafe { [INFO] [stdout] | ----------------------- associated items in this implementation [INFO] [stdout] 20 | /// Create a new disjoint set with `size` elements [INFO] [stdout] 21 | pub fn new(size: usize) -> Self { [INFO] [stdout] | ^^^ [INFO] [stdout] ... [INFO] [stdout] 47 | pub fn find(&self, mut id: usize) -> usize { [INFO] [stdout] | ^^^^ [INFO] [stdout] ... [INFO] [stdout] 71 | pub fn unite(&self, mut id1: usize, mut id2: usize) -> usize { [INFO] [stdout] | ^^^^^ [INFO] [stdout] ... [INFO] [stdout] 118 | pub fn size(&self) -> usize { [INFO] [stdout] | ^^^^ [INFO] [stdout] ... [INFO] [stdout] 123 | fn rank_unchecked(&self, id: usize) -> u64 { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 131 | fn parent_unchecked(&self, id: usize) -> usize { [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `len` and `is_empty` are never used [INFO] [stdout] --> src/intervaltree.rs:45:8 [INFO] [stdout] | [INFO] [stdout] 11 | pub trait IntervalTree: Send + Sync [INFO] [stdout] | ------------ methods in this trait [INFO] [stdout] ... [INFO] [stdout] 45 | fn len(&self) -> usize; [INFO] [stdout] | ^^^ [INFO] [stdout] ... [INFO] [stdout] 48 | fn is_empty(&self) -> bool { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function `new_memory_with_capacity` is never used [INFO] [stdout] --> src/intervaltree.rs:421:12 [INFO] [stdout] | [INFO] [stdout] 405 | / impl AdaptiveTree [INFO] [stdout] 406 | | where [INFO] [stdout] 407 | | K: Ord + Copy + Default + Send + Sync + 'static, [INFO] [stdout] 408 | | V: Copy + Default + Send + Sync + 'static, [INFO] [stdout] | |______________________________________________- associated function in this implementation [INFO] [stdout] ... [INFO] [stdout] 421 | pub fn new_memory_with_capacity(capacity: usize) -> io::Result { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function `with_capacity` is never used [INFO] [stdout] --> src/intervaltree.rs:155:16 [INFO] [stdout] | [INFO] [stdout] 142 | / impl InMemoryTree [INFO] [stdout] 143 | | where [INFO] [stdout] 144 | | K: Ord + Copy, [INFO] [stdout] 145 | | V: Copy, [INFO] [stdout] | |________________- associated function in this implementation [INFO] [stdout] ... [INFO] [stdout] 155 | pub fn with_capacity(capacity: usize) -> Self { [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `is_empty` is never used [INFO] [stdout] --> src/links.rs:99:12 [INFO] [stdout] | [INFO] [stdout] 73 | impl LinkSet { [INFO] [stdout] | ------------ method in this implementation [INFO] [stdout] ... [INFO] [stdout] 99 | pub fn is_empty(&self) -> bool { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `to_string` is never used [INFO] [stdout] --> src/paf.rs:71:12 [INFO] [stdout] | [INFO] [stdout] 21 | impl PafRow { [INFO] [stdout] | ----------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 71 | pub fn to_string(&self) -> String { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `parse_paf_spec` is never used [INFO] [stdout] --> src/paf.rs:98:8 [INFO] [stdout] | [INFO] [stdout] 98 | pub fn parse_paf_spec(spec: &str) -> Vec<(String, u64)> { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `AlnPosT` is never constructed [INFO] [stdout] --> src/pos.rs:9:12 [INFO] [stdout] | [INFO] [stdout] 9 | pub struct AlnPosT { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `rev_pos_t` is never used [INFO] [stdout] --> src/pos.rs:103:8 [INFO] [stdout] | [INFO] [stdout] 103 | pub fn rev_pos_t(pos: PosT) -> PosT { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `pos_to_string` is never used [INFO] [stdout] --> src/pos.rs:108:8 [INFO] [stdout] | [INFO] [stdout] 108 | pub fn pos_to_string(pos: PosT) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `subseq_by_name`, `subseq_by_id`, `subseq_absolute`, `seq_by_name`, and `pos_in_all_seqs` are never used [INFO] [stdout] --> src/seqindex.rs:468:12 [INFO] [stdout] | [INFO] [stdout] 96 | impl SeqIndex { [INFO] [stdout] | ------------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 468 | pub fn subseq_by_name(&self, name: &str, pos: u64, count: u64) -> Option { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 474 | pub fn subseq_by_id(&self, seq_id: usize, pos: u64, count: u64) -> Option { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 486 | pub fn subseq_absolute(&self, pos: u64, count: u64) -> Option { [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 499 | pub fn seq_by_name(&self, name: &str) -> Option { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 506 | pub fn pos_in_all_seqs(&self, name: &str, pos: u64, is_rev: bool) -> Option { [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `SxsAlignment` is never constructed [INFO] [stdout] --> src/sxs.rs:5:12 [INFO] [stdout] | [INFO] [stdout] 5 | pub struct SxsAlignment { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated items `new`, `from_lines`, `is_good`, `is_reverse`, and `to_string` are never used [INFO] [stdout] --> src/sxs.rs:22:12 [INFO] [stdout] | [INFO] [stdout] 20 | impl SxsAlignment { [INFO] [stdout] | ----------------- associated items in this implementation [INFO] [stdout] 21 | /// Create a new empty SXS alignment [INFO] [stdout] 22 | pub fn new() -> Self { [INFO] [stdout] | ^^^ [INFO] [stdout] ... [INFO] [stdout] 46 | pub fn from_lines(lines: &[&str]) -> Option { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 108 | pub fn is_good(&self) -> bool { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 113 | pub fn is_reverse(&self) -> bool { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 119 | pub fn to_string(&self) -> String { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `remove` is never used [INFO] [stdout] --> src/tempfile.rs:106:8 [INFO] [stdout] | [INFO] [stdout] 106 | pub fn remove(filename: &Path) { [INFO] [stdout] | ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `get_dir` is never used [INFO] [stdout] --> src/tempfile.rs:119:8 [INFO] [stdout] | [INFO] [stdout] 119 | pub fn get_dir() -> PathBuf { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `time_since_epoch_ms` is never used [INFO] [stdout] --> src/time.rs:4:8 [INFO] [stdout] | [INFO] [stdout] 4 | pub fn time_since_epoch_ms() -> u64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `wang_hash_64` is never used [INFO] [stdout] --> src/transclosure.rs:28:8 [INFO] [stdout] | [INFO] [stdout] 28 | pub fn wang_hash_64(mut key: u64) -> u64 { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `length` is never used [INFO] [stdout] --> src/transclosure.rs:65:12 [INFO] [stdout] | [INFO] [stdout] 60 | impl Match { [INFO] [stdout] | ---------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 65 | pub fn length(&self) -> u64 { [INFO] [stdout] | ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `file_exists` is never used [INFO] [stdout] --> src/utils.rs:4:8 [INFO] [stdout] | [INFO] [stdout] 4 | pub fn file_exists(filename: &str) -> bool { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `handy_parameter` is never used [INFO] [stdout] --> src/utils.rs:18:8 [INFO] [stdout] | [INFO] [stdout] 18 | pub fn handy_parameter(value: &str, default_value: f64) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/transclosure.rs:201:5 [INFO] [stdout] | [INFO] [stdout] 201 | node_iitree.add(match_start_in_s, match_end_in_s, match_pos_in_q); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: `#[warn(unused_must_use)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 201 | let _ = node_iitree.add(match_start_in_s, match_end_in_s, match_pos_in_q); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/transclosure.rs:202:5 [INFO] [stdout] | [INFO] [stdout] 202 | path_iitree.add(match_start_in_q, match_end_in_q, match_pos_in_s); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 202 | let _ = path_iitree.add(match_start_in_q, match_end_in_q, match_pos_in_s); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `size` is never used [INFO] [stdout] --> src/dset64.rs:129:12 [INFO] [stdout] | [INFO] [stdout] 22 | impl DisjointSets { [INFO] [stdout] | ----------------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 129 | pub fn size(&self) -> usize { [INFO] [stdout] | ^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `size` is never used [INFO] [stdout] --> src/dset64_asm.rs:122:12 [INFO] [stdout] | [INFO] [stdout] 22 | impl DisjointSetsAsm { [INFO] [stdout] | -------------------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 122 | pub fn size(&self) -> usize { [INFO] [stdout] | ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `size` is never used [INFO] [stdout] --> src/dset64_unsafe.rs:118:12 [INFO] [stdout] | [INFO] [stdout] 19 | impl DisjointSetsUnsafe { [INFO] [stdout] | ----------------------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 118 | pub fn size(&self) -> usize { [INFO] [stdout] | ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `is_empty` is never used [INFO] [stdout] --> src/intervaltree.rs:48:8 [INFO] [stdout] | [INFO] [stdout] 11 | pub trait IntervalTree: Send + Sync [INFO] [stdout] | ------------ method in this trait [INFO] [stdout] ... [INFO] [stdout] 48 | fn is_empty(&self) -> bool { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function `new_memory_with_capacity` is never used [INFO] [stdout] --> src/intervaltree.rs:421:12 [INFO] [stdout] | [INFO] [stdout] 405 | / impl AdaptiveTree [INFO] [stdout] 406 | | where [INFO] [stdout] 407 | | K: Ord + Copy + Default + Send + Sync + 'static, [INFO] [stdout] 408 | | V: Copy + Default + Send + Sync + 'static, [INFO] [stdout] | |______________________________________________- associated function in this implementation [INFO] [stdout] ... [INFO] [stdout] 421 | pub fn new_memory_with_capacity(capacity: usize) -> io::Result { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function `with_capacity` is never used [INFO] [stdout] --> src/intervaltree.rs:155:16 [INFO] [stdout] | [INFO] [stdout] 142 | / impl InMemoryTree [INFO] [stdout] 143 | | where [INFO] [stdout] 144 | | K: Ord + Copy, [INFO] [stdout] 145 | | V: Copy, [INFO] [stdout] | |________________- associated function in this implementation [INFO] [stdout] ... [INFO] [stdout] 155 | pub fn with_capacity(capacity: usize) -> Self { [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `is_empty` is never used [INFO] [stdout] --> src/links.rs:99:12 [INFO] [stdout] | [INFO] [stdout] 73 | impl LinkSet { [INFO] [stdout] | ------------ method in this implementation [INFO] [stdout] ... [INFO] [stdout] 99 | pub fn is_empty(&self) -> bool { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `subseq_by_name` and `pos_in_all_seqs` are never used [INFO] [stdout] --> src/seqindex.rs:468:12 [INFO] [stdout] | [INFO] [stdout] 96 | impl SeqIndex { [INFO] [stdout] | ------------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 468 | pub fn subseq_by_name(&self, name: &str, pos: u64, count: u64) -> Option { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 506 | pub fn pos_in_all_seqs(&self, name: &str, pos: u64, is_rev: bool) -> Option { [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/transclosure.rs:201:5 [INFO] [stdout] | [INFO] [stdout] 201 | node_iitree.add(match_start_in_s, match_end_in_s, match_pos_in_q); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: `#[warn(unused_must_use)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 201 | let _ = node_iitree.add(match_start_in_s, match_end_in_s, match_pos_in_q); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/transclosure.rs:202:5 [INFO] [stdout] | [INFO] [stdout] 202 | path_iitree.add(match_start_in_q, match_end_in_q, match_pos_in_s); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 202 | let _ = path_iitree.add(match_start_in_q, match_end_in_q, match_pos_in_s); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 20.13s [INFO] running `Command { std: "docker" "inspect" "ec2b96bf506fc3ee92840f4432e3142823568c49ea72241ae14acdc5b4e8a21b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ec2b96bf506fc3ee92840f4432e3142823568c49ea72241ae14acdc5b4e8a21b", kill_on_drop: false }` [INFO] [stdout] ec2b96bf506fc3ee92840f4432e3142823568c49ea72241ae14acdc5b4e8a21b