[INFO] cloning repository https://github.com/ARU-life-sciences/hmm_tblout
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ARU-life-sciences/hmm_tblout" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FARU-life-sciences%2Fhmm_tblout", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FARU-life-sciences%2Fhmm_tblout'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] bd40a6d4da0c7f2a6e9a2e04603bc7753cf0cd4e
[INFO] testing ARU-life-sciences/hmm_tblout against try#0abe69e6c16114311cc2700e972492e64d69c28f for pr-154065
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FARU-life-sciences%2Fhmm_tblout" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/ARU-life-sciences/hmm_tblout
[INFO] finished tweaking git repo https://github.com/ARU-life-sciences/hmm_tblout
[INFO] tweaked toml for git repo https://github.com/ARU-life-sciences/hmm_tblout written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/ARU-life-sciences/hmm_tblout on toolchain 0abe69e6c16114311cc2700e972492e64d69c28f
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/ARU-life-sciences/hmm_tblout already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 5e07f725398d8bdc5dbfb81482b161e2e71920c9a4df635efe01030372330a82
[INFO] running `Command { std: "docker" "start" "-a" "5e07f725398d8bdc5dbfb81482b161e2e71920c9a4df635efe01030372330a82", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5e07f725398d8bdc5dbfb81482b161e2e71920c9a4df635efe01030372330a82", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5e07f725398d8bdc5dbfb81482b161e2e71920c9a4df635efe01030372330a82", kill_on_drop: false }`
[INFO] [stdout] 5e07f725398d8bdc5dbfb81482b161e2e71920c9a4df635efe01030372330a82
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3e908b83c4b8f778a79789aab1b8fcfa35e98a692cb3550ba383e9199e8bfa9d
[INFO] running `Command { std: "docker" "start" "-a" "3e908b83c4b8f778a79789aab1b8fcfa35e98a692cb3550ba383e9199e8bfa9d", kill_on_drop: false }`
[INFO] [stderr]    Compiling hmm_tblout v0.4.23 (/opt/rustwide/workdir)
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]    --> src/reader.rs:476:20
[INFO] [stdout]     |
[INFO] [stdout] 476 |     pub fn records(&mut self) -> RecordsIter<R> {
[INFO] [stdout]     |                    ^^^^^^^^^     ^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]     |                    |
[INFO] [stdout]     |                    the lifetime is elided here
[INFO] [stdout]     |
[INFO] [stdout]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]     |
[INFO] [stdout] 476 |     pub fn records(&mut self) -> RecordsIter<'_, R> {
[INFO] [stdout]     |                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.22s
[INFO] running `Command { std: "docker" "inspect" "3e908b83c4b8f778a79789aab1b8fcfa35e98a692cb3550ba383e9199e8bfa9d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3e908b83c4b8f778a79789aab1b8fcfa35e98a692cb3550ba383e9199e8bfa9d", kill_on_drop: false }`
[INFO] [stdout] 3e908b83c4b8f778a79789aab1b8fcfa35e98a692cb3550ba383e9199e8bfa9d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3addc482da371795fe26109f226e911bc17dfb1ede2315ab126ebd65579155f6
[INFO] running `Command { std: "docker" "start" "-a" "3addc482da371795fe26109f226e911bc17dfb1ede2315ab126ebd65579155f6", kill_on_drop: false }`
[INFO] [stderr]    Compiling hmm_tblout v0.4.23 (/opt/rustwide/workdir)
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]    --> src/reader.rs:476:20
[INFO] [stdout]     |
[INFO] [stdout] 476 |     pub fn records(&mut self) -> RecordsIter<R> {
[INFO] [stdout]     |                    ^^^^^^^^^     ^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]     |                    |
[INFO] [stdout]     |                    the lifetime is elided here
[INFO] [stdout]     |
[INFO] [stdout]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]     |
[INFO] [stdout] 476 |     pub fn records(&mut self) -> RecordsIter<'_, R> {
[INFO] [stdout]     |                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `NHMMSCAN_FILE` is never used
[INFO] [stdout]    --> src/lib.rs:140:11
[INFO] [stdout]     |
[INFO] [stdout] 140 |     const NHMMSCAN_FILE: &str = "# target name        accession  query name           accession  hmmfrom hmm to alifrom  ali to env...
[INFO] [stdout]     |           ^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `HMMSCAN_FILE` is never used
[INFO] [stdout]    --> src/lib.rs:161:11
[INFO] [stdout]     |
[INFO] [stdout] 161 |     const HMMSCAN_FILE: &str = "#                                                               --- full sequence ---- --- best 1 d...
[INFO] [stdout]     |           ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `HMMSEARCH_FILE` is never used
[INFO] [stdout]    --> src/lib.rs:189:11
[INFO] [stdout]     |
[INFO] [stdout] 189 |     const HMMSEARCH_FILE: &str = "#                                                               --- full sequence ---- --- best 1...
[INFO] [stdout]     |           ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]    --> src/reader.rs:476:20
[INFO] [stdout]     |
[INFO] [stdout] 476 |     pub fn records(&mut self) -> RecordsIter<R> {
[INFO] [stdout]     |                    ^^^^^^^^^     ^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]     |                    |
[INFO] [stdout]     |                    the lifetime is elided here
[INFO] [stdout]     |
[INFO] [stdout]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]     |
[INFO] [stdout] 476 |     pub fn records(&mut self) -> RecordsIter<'_, R> {
[INFO] [stdout]     |                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.36s
[INFO] running `Command { std: "docker" "inspect" "3addc482da371795fe26109f226e911bc17dfb1ede2315ab126ebd65579155f6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3addc482da371795fe26109f226e911bc17dfb1ede2315ab126ebd65579155f6", kill_on_drop: false }`
[INFO] [stdout] 3addc482da371795fe26109f226e911bc17dfb1ede2315ab126ebd65579155f6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 0f78c07d5e7c3384d4b7bc7c3f5fd153067241b9cc8f86eeb7ba6839e25d6759
[INFO] running `Command { std: "docker" "start" "-a" "0f78c07d5e7c3384d4b7bc7c3f5fd153067241b9cc8f86eeb7ba6839e25d6759", kill_on_drop: false }`
[INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stderr]    --> src/reader.rs:476:20
[INFO] [stderr]     |
[INFO] [stderr] 476 |     pub fn records(&mut self) -> RecordsIter<R> {
[INFO] [stderr]     |                    ^^^^^^^^^     ^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stderr]     |                    |
[INFO] [stderr]     |                    the lifetime is elided here
[INFO] [stderr]     |
[INFO] [stderr]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stderr]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stderr] help: use `'_` for type paths
[INFO] [stderr]     |
[INFO] [stderr] 476 |     pub fn records(&mut self) -> RecordsIter<'_, R> {
[INFO] [stderr]     |                                              +++
[INFO] [stderr] 
[INFO] [stderr] warning: `hmm_tblout` (lib) generated 1 warning (run `cargo fix --lib -p hmm_tblout` to apply 1 suggestion)
[INFO] [stderr] warning: constant `NHMMSCAN_FILE` is never used
[INFO] [stderr]    --> src/lib.rs:140:11
[INFO] [stderr]     |
[INFO] [stderr] 140 |     const NHMMSCAN_FILE: &str = "# target name        accession  query name           accession  hmmfrom hmm to alifrom  ali to env...
[INFO] [stderr]     |           ^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: constant `HMMSCAN_FILE` is never used
[INFO] [stderr]    --> src/lib.rs:161:11
[INFO] [stderr]     |
[INFO] [stderr] 161 |     const HMMSCAN_FILE: &str = "#                                                               --- full sequence ---- --- best 1 d...
[INFO] [stderr]     |           ^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: constant `HMMSEARCH_FILE` is never used
[INFO] [stderr]    --> src/lib.rs:189:11
[INFO] [stderr]     |
[INFO] [stderr] 189 |     const HMMSEARCH_FILE: &str = "#                                                               --- full sequence ---- --- best 1...
[INFO] [stderr]     |           ^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: `hmm_tblout` (lib test) generated 4 warnings (1 duplicate)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.01s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/hmm_tblout-8a0efce9e16691c1)
[INFO] [stdout] 
[INFO] [stdout] running 10 tests
[INFO] [stdout] test tests::test_cmscan ... ok
[INFO] [stdout] test tests::test_header ... ok
[INFO] [stdout] test tests::test_jackhmmer_meta ... ok
[INFO] [stdout] test tests::test_meta ... ok
[INFO] [stdout] test tests::test_phmmer_records ... ok
[INFO] [stdout] test tests::test_jackhmmer_records ... ok
[INFO] [stdout] test tests::test_whole_file ... ok
[INFO] [stdout] test tests::in_same_as_out ... FAILED
[INFO] [stdout] test tests::in_same_as_out_n ... FAILED
[INFO] [stdout] test tests::test_phmmer_write ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- tests::in_same_as_out stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'tests::in_same_as_out' (17) panicked at src/lib.rs:327:9:
[INFO] [stdout] assertion `left == right` failed
[INFO] [stdout]   left: "#                                                               --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----\n# target name        accession  query name           accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target\n#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------\nHBB_HUMAN            -          MYG_ESCGI            -            2.3e-11   30.3   0.1   2.5e-11   30.2   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          MYG_HORSE            -            5.1e-12   32.3   0.1   6.1e-12   32.1   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          MYG_PROGU            -            9.3e-13   34.6     0   1.1e-12   34.4     0   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          MYG_SAISC            -            7.4e-13   35.1     0     8e-13     35     0   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBB_LARRI            -                0e0  222.2   0.1       0e0    222   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBB1_VAREX           -                0e0  210.6   0.2       0e0  210.5   0.2   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBB2_XENTR           -                0e0  163.9   0.1       0e0  163.7   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBBL_RANCA           -                0e0    180   0.1       0e0  179.9   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBB2_TRICR           -                0e0    143     0       0e0  142.8     0   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\n#\n# Program:         phmmer\n# Version:         3.2 (June 2018)\n# Pipeline mode:   SEARCH\n# Query file:      /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa\n# Target file:     /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Options:         phmmer -o globins45.fa.phmmer_matches.out --tblout globins45.fa.phmmer_matches.tblout /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Current dir:     /tmp/cwl\n# Date:            Tue Jul 17 13:01:19 2018\n# [ok]"
[INFO] [stdout]  right: "#                                                               --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----\n# target name        accession  query name           accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target\n#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------\nHBB_HUMAN            -          MYG_ESCGI            -            2.3e-11   30.3   0.1   2.5e-11   30.2   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          MYG_HORSE            -            5.1e-12   32.3   0.1   6.1e-12   32.1   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          MYG_PROGU            -            9.3e-13   34.6   0.0   1.1e-12   34.4   0.0   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          MYG_SAISC            -            7.4e-13   35.1   0.0     8e-13   35.0   0.0   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBB_LARRI            -            1.5e-70  222.2   0.1   1.6e-70  222.0   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBB1_VAREX           -              7e-67  210.6   0.2   7.7e-67  210.5   0.2   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBB2_XENTR           -            1.2e-52  163.9   0.1   1.4e-52  163.7   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBBL_RANCA           -            1.5e-57  180.0   0.1   1.7e-57  179.9   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\nHBB_HUMAN            -          HBB2_TRICR           -            3.4e-46  143.0   0.0   3.7e-46  142.8   0.0   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\n#\n# Program:         phmmer\n# Version:         3.2 (June 2018)\n# Pipeline mode:   SEARCH\n# Query file:      /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa\n# Target file:     /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Option settings: phmmer -o globins45.fa.phmmer_matches.out --tblout globins45.fa.phmmer_matches.tblout /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN \n# Current dir:     /tmp/cwl\n# Date:            Tue Jul 17 13:01:19 2018\n# [ok]"
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x620d0d40e85a - std[ec4e911328de40a6]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x620d0d40e85a - std[ec4e911328de40a6]::backtrace_rs::backtrace::trace_unsynchronized::<std[ec4e911328de40a6]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x620d0d40e85a - std[ec4e911328de40a6]::sys::backtrace::_print_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:74:9
[INFO] [stdout]    3:     0x620d0d40e85a - <<std[ec4e911328de40a6]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[a96a4c5c53f902a3]::fmt::Display>::fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:44:26
[INFO] [stdout]    4:     0x620d0d423b8a - <core[a96a4c5c53f902a3]::fmt::rt::Argument>::fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/fmt/rt.rs:152:76
[INFO] [stdout]    5:     0x620d0d423b8a - core[a96a4c5c53f902a3]::fmt::write
[INFO] [stdout]    6:     0x620d0d413162 - std[ec4e911328de40a6]::io::default_write_fmt::<alloc[c960326de6de28e6]::vec::Vec<u8>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x620d0d413162 - <alloc[c960326de6de28e6]::vec::Vec<u8> as std[ec4e911328de40a6]::io::Write>::write_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/io/mod.rs:1994:13
[INFO] [stdout]    8:     0x620d0d3eda3f - <std[ec4e911328de40a6]::sys::backtrace::BacktraceLock>::print
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:47:9
[INFO] [stdout]    9:     0x620d0d3eda3f - std[ec4e911328de40a6]::panicking::default_hook::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:292:27
[INFO] [stdout]   10:     0x620d0d406e19 - std[ec4e911328de40a6]::panicking::default_hook
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:316:9
[INFO] [stdout]   11:     0x620d0d3a3f9c - <alloc[c960326de6de28e6]::boxed::Box<dyn for<'a, 'b> core[a96a4c5c53f902a3]::ops::function::Fn<(&'a std[ec4e911328de40a6]::panic::PanicHookInfo<'b>,), Output = ()> + core[a96a4c5c53f902a3]::marker::Sync + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::Fn<(&std[ec4e911328de40a6]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2254:9
[INFO] [stdout]   12:     0x620d0d3a3f9c - test[30c43f9fd66fea90]::test_main_with_exit_callback::<test[30c43f9fd66fea90]::test_main::{closure#0}>::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:145:21
[INFO] [stdout]   13:     0x620d0d406fd2 - <alloc[c960326de6de28e6]::boxed::Box<dyn for<'a, 'b> core[a96a4c5c53f902a3]::ops::function::Fn<(&'a std[ec4e911328de40a6]::panic::PanicHookInfo<'b>,), Output = ()> + core[a96a4c5c53f902a3]::marker::Sync + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::Fn<(&std[ec4e911328de40a6]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2254:9
[INFO] [stdout]   14:     0x620d0d406fd2 - std[ec4e911328de40a6]::panicking::panic_with_hook
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:833:13
[INFO] [stdout]   15:     0x620d0d3edaf8 - std[ec4e911328de40a6]::panicking::panic_handler::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:698:13
[INFO] [stdout]   16:     0x620d0d3e5499 - std[ec4e911328de40a6]::sys::backtrace::__rust_end_short_backtrace::<std[ec4e911328de40a6]::panicking::panic_handler::{closure#0}, !>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:182:18
[INFO] [stdout]   17:     0x620d0d3ee80d - __rustc[aa69f48705c57ca8]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:689:5
[INFO] [stdout]   18:     0x620d0d42431c - core[a96a4c5c53f902a3]::panicking::panic_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:80:14
[INFO] [stdout]   19:     0x620d0d4241d3 - core[a96a4c5c53f902a3]::panicking::assert_failed_inner
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:439:17
[INFO] [stdout]   20:     0x620d0d38c873 - core[a96a4c5c53f902a3]::panicking::assert_failed::<alloc[c960326de6de28e6]::string::String, &str>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:394:5
[INFO] [stdout]   21:     0x620d0d3919c7 - hmm_tblout[34c9b8be904bc1b8]::tests::in_same_as_out
[INFO] [stdout]                                at /opt/rustwide/workdir/src/lib.rs:327:9
[INFO] [stdout]   22:     0x620d0d38fc37 - hmm_tblout[34c9b8be904bc1b8]::tests::in_same_as_out::{closure#0}
[INFO] [stdout]                                at /opt/rustwide/workdir/src/lib.rs:309:24
[INFO] [stdout]   23:     0x620d0d38c306 - <hmm_tblout[34c9b8be904bc1b8]::tests::in_same_as_out::{closure#0} as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x620d0d39807b - <fn() -> core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   25:     0x620d0d39807b - test[30c43f9fd66fea90]::__rust_begin_short_backtrace::<core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>, fn() -> core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:663:18
[INFO] [stdout]   26:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test_in_process::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:686:74
[INFO] [stdout]   27:     0x620d0d3a4a6b - <core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   28:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panicking::catch_unwind::do_call::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>, core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stdout]   29:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panicking::catch_unwind::<core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>, core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stdout]   30:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panic::catch_unwind::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>, core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stdout]   31:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test_in_process
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:686:27
[INFO] [stdout]   32:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:607:43
[INFO] [stdout]   33:     0x620d0d3a0184 - test[30c43f9fd66fea90]::run_test::{closure#1}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:637:41
[INFO] [stdout]   34:     0x620d0d3a0184 - std[ec4e911328de40a6]::sys::backtrace::__rust_begin_short_backtrace::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:166:18
[INFO] [stdout]   35:     0x620d0d3a7672 - std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/thread/lifecycle.rs:91:13
[INFO] [stdout]   36:     0x620d0d3a7672 - <core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   37:     0x620d0d3a7672 - std[ec4e911328de40a6]::panicking::catch_unwind::do_call::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stdout]   38:     0x620d0d3a7672 - std[ec4e911328de40a6]::panicking::catch_unwind::<(), core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stdout]   39:     0x620d0d3a7672 - std[ec4e911328de40a6]::panic::catch_unwind::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stdout]   40:     0x620d0d3a7672 - std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/thread/lifecycle.rs:89:26
[INFO] [stdout]   41:     0x620d0d3a7672 - <std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1} as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   42:     0x620d0d40e16f - <alloc[c960326de6de28e6]::boxed::Box<dyn core[a96a4c5c53f902a3]::ops::function::FnOnce<(), Output = ()> + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2240:9
[INFO] [stdout]   43:     0x620d0d40e16f - <std[ec4e911328de40a6]::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/thread/unix.rs:118:17
[INFO] [stdout]   44:     0x795642748aa4 - <unknown>
[INFO] [stdout]   45:     0x7956427d5a64 - clone
[INFO] [stdout]   46:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] ---- tests::in_same_as_out_n stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'tests::in_same_as_out_n' (18) panicked at src/lib.rs:353:9:
[INFO] [stdout] assertion `left == right` failed
[INFO] [stdout]   left: "# target name        accession  query name           accession  hmmfrom hmm to  alifrom   ali to  envfrom   env to   sq len strand   E-value  score  bias  description of target\n#------------------- ---------- -------------------- ---------- ------- -------  -------  -------  -------  -------  ------- ------ --------- ------ ----- ---------------------\nSUPER_1              -          TR                   -                1     315 10988331 10987997 10988331 10987995 52766903   -      6.5e-34  124.1   1.2 -                    \nSUPER_3              -          TR                   -              139     204 17951382 17951472 17951359 17951492 49366223   +       7.4e-1   15.6     3 -                    \nSUPER_4              -          TR                   -               29     130 20542008 20542119 20541989 20542141 47284787   +        1.1e0   15.1   5.7 -                    \nSUPER_4              -          TR                   -               29     126 32993383 32993283 32993398 32993263 47284787   -        2.2e0   14.1     1 -                    \nSUPER_4              -          TR                   -               23     126 14861076 14861174 14861063 14861195 47284787   +        2.4e0   13.9   3.4 -                    \nSUPER_5              -          TR                   -               21     126 27641355 27641256 27641369 27641229 46997258   -        2.5e0   13.8   6.5 -                    \nSUPER_8              -          TR                   -              158     191 33162494 33162454 33162514 33162446 33878543   -        3.1e0   13.6     2 -                    \nSUPER_5              -          TR                   -              107     162 46228956 46228885 46228975 46228876 46997258   -        3.1e0   13.6     0 -                    \nSUPER_1              -          TR                   -               68     173 15697438 15697327 15697464 15697325 52766903   -        4.4e0   13.1   0.7 -                    \nSUPER_3              -          TR                   -               24     128 36147201 36147098 36147221 36147078 49366223   -        4.5e0     13   1.9 -                    \nSUPER_1              -          TR                   -                1      84 36988055 36987966 36988055 36987944 52766903   -        4.7e0     13   2.1 -                    \nSUPER_6              -          TR                   -               38     122 20863320 20863225 20863338 20863202 43664244   -          5e0   12.9   2.2 -                    \nSUPER_8              -          TR                   -                1      79 32349659 32349576 32349659 32349556 33878543   -        5.9e0   12.6   2.5 -                    \nSUPER_2              -          TR                   -               22     128 38320620 38320502 38320631 38320480 52745556   -        6.5e0   12.5     0 -                    \nSUPER_1              -          TR                   -                2      55  1602497  1602446  1602498  1602420 52766903   -        8.6e0   12.1   7.2 -                    \nSUPER_2              -          TR                   -                2     100 26735237 26735139 26735238 26735122 52745556   -          9e0     12   1.4 -                    \n#\n# Program:         nhmmer\n# Version:         3.4 (Aug 2023)\n# Pipeline mode:   SEARCH\n# Query file:      TR.hmm\n# Target file:     /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Options:         /software/team301/hmmer-3.4/src/nhmmer --tblout Misopates_orontium.tbl --dna --cpu 10 TR.hmm /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Current dir:     /lustre/scratch123/tol/teams/blaxter/users/mb39/ARU/tr_detection\n# Date:            Fri May  3 10:07:36 2024\n# [ok]"
[INFO] [stdout]  right: "# target name        accession  query name           accession  hmmfrom hmm to  alifrom   ali to  envfrom   env to   sq len strand   E-value  score  bias  description of target\n#------------------- ---------- -------------------- ---------- ------- -------  -------  -------  -------  -------  ------- ------ --------- ------ ----- ---------------------\nSUPER_1              -          TR                   -                1     315 10988331 10987997 10988331 10987995 52766903    -     6.5e-34  124.1   1.2  -\nSUPER_3              -          TR                   -              139     204 17951382 17951472 17951359 17951492 49366223    +        0.74   15.6   3.0  -\nSUPER_4              -          TR                   -               29     130 20542008 20542119 20541989 20542141 47284787    +         1.1   15.1   5.7  -\nSUPER_4              -          TR                   -               29     126 32993383 32993283 32993398 32993263 47284787    -         2.2   14.1   1.0  -\nSUPER_4              -          TR                   -               23     126 14861076 14861174 14861063 14861195 47284787    +         2.4   13.9   3.4  -\nSUPER_5              -          TR                   -               21     126 27641355 27641256 27641369 27641229 46997258    -         2.5   13.8   6.5  -\nSUPER_8              -          TR                   -              158     191 33162494 33162454 33162514 33162446 33878543    -         3.1   13.6   2.0  -\nSUPER_5              -          TR                   -              107     162 46228956 46228885 46228975 46228876 46997258    -         3.1   13.6   0.0  -\nSUPER_1              -          TR                   -               68     173 15697438 15697327 15697464 15697325 52766903    -         4.4   13.1   0.7  -\nSUPER_3              -          TR                   -               24     128 36147201 36147098 36147221 36147078 49366223    -         4.5   13.0   1.9  -\nSUPER_1              -          TR                   -                1      84 36988055 36987966 36988055 36987944 52766903    -         4.7   13.0   2.1  -\nSUPER_6              -          TR                   -               38     122 20863320 20863225 20863338 20863202 43664244    -           5   12.9   2.2  -\nSUPER_8              -          TR                   -                1      79 32349659 32349576 32349659 32349556 33878543    -         5.9   12.6   2.5  -\nSUPER_2              -          TR                   -               22     128 38320620 38320502 38320631 38320480 52745556    -         6.5   12.5   0.0  -\nSUPER_1              -          TR                   -                2      55  1602497  1602446  1602498  1602420 52766903    -         8.6   12.1   7.2  -\nSUPER_2              -          TR                   -                2     100 26735237 26735139 26735238 26735122 52745556    -           9   12.0   1.4  -\n#\n# Program:         nhmmer\n# Version:         3.4 (Aug 2023)\n# Pipeline mode:   SEARCH\n# Query file:      TR.hmm\n# Target file:     /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Option settings: /software/team301/hmmer-3.4/src/nhmmer --tblout Misopates_orontium.tbl --dna --cpu 10 TR.hmm /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Current dir:     /lustre/scratch123/tol/teams/blaxter/users/mb39/ARU/tr_detection\n# Date:            Fri May  3 10:07:36 2024\n# [ok]"
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x620d0d40e85a - std[ec4e911328de40a6]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x620d0d40e85a - std[ec4e911328de40a6]::backtrace_rs::backtrace::trace_unsynchronized::<std[ec4e911328de40a6]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x620d0d40e85a - std[ec4e911328de40a6]::sys::backtrace::_print_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:74:9
[INFO] [stdout]    3:     0x620d0d40e85a - <<std[ec4e911328de40a6]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[a96a4c5c53f902a3]::fmt::Display>::fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:44:26
[INFO] [stdout]    4:     0x620d0d423b8a - <core[a96a4c5c53f902a3]::fmt::rt::Argument>::fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/fmt/rt.rs:152:76
[INFO] [stdout]    5:     0x620d0d423b8a - core[a96a4c5c53f902a3]::fmt::write
[INFO] [stdout]    6:     0x620d0d413162 - std[ec4e911328de40a6]::io::default_write_fmt::<alloc[c960326de6de28e6]::vec::Vec<u8>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x620d0d413162 - <alloc[c960326de6de28e6]::vec::Vec<u8> as std[ec4e911328de40a6]::io::Write>::write_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/io/mod.rs:1994:13
[INFO] [stdout]    8:     0x620d0d3eda3f - <std[ec4e911328de40a6]::sys::backtrace::BacktraceLock>::print
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:47:9
[INFO] [stdout]    9:     0x620d0d3eda3f - std[ec4e911328de40a6]::panicking::default_hook::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:292:27
[INFO] [stdout]   10:     0x620d0d406e19 - std[ec4e911328de40a6]::panicking::default_hook
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:316:9
[INFO] [stdout]   11:     0x620d0d3a3f9c - <alloc[c960326de6de28e6]::boxed::Box<dyn for<'a, 'b> core[a96a4c5c53f902a3]::ops::function::Fn<(&'a std[ec4e911328de40a6]::panic::PanicHookInfo<'b>,), Output = ()> + core[a96a4c5c53f902a3]::marker::Sync + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::Fn<(&std[ec4e911328de40a6]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2254:9
[INFO] [stdout]   12:     0x620d0d3a3f9c - test[30c43f9fd66fea90]::test_main_with_exit_callback::<test[30c43f9fd66fea90]::test_main::{closure#0}>::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:145:21
[INFO] [stdout]   13:     0x620d0d406fd2 - <alloc[c960326de6de28e6]::boxed::Box<dyn for<'a, 'b> core[a96a4c5c53f902a3]::ops::function::Fn<(&'a std[ec4e911328de40a6]::panic::PanicHookInfo<'b>,), Output = ()> + core[a96a4c5c53f902a3]::marker::Sync + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::Fn<(&std[ec4e911328de40a6]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2254:9
[INFO] [stdout]   14:     0x620d0d406fd2 - std[ec4e911328de40a6]::panicking::panic_with_hook
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:833:13
[INFO] [stdout]   15:     0x620d0d3edaf8 - std[ec4e911328de40a6]::panicking::panic_handler::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:698:13
[INFO] [stdout]   16:     0x620d0d3e5499 - std[ec4e911328de40a6]::sys::backtrace::__rust_end_short_backtrace::<std[ec4e911328de40a6]::panicking::panic_handler::{closure#0}, !>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:182:18
[INFO] [stdout]   17:     0x620d0d3ee80d - __rustc[aa69f48705c57ca8]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:689:5
[INFO] [stdout]   18:     0x620d0d42431c - core[a96a4c5c53f902a3]::panicking::panic_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:80:14
[INFO] [stdout]   19:     0x620d0d4241d3 - core[a96a4c5c53f902a3]::panicking::assert_failed_inner
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:439:17
[INFO] [stdout]   20:     0x620d0d38c873 - core[a96a4c5c53f902a3]::panicking::assert_failed::<alloc[c960326de6de28e6]::string::String, &str>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:394:5
[INFO] [stdout]   21:     0x620d0d392978 - hmm_tblout[34c9b8be904bc1b8]::tests::in_same_as_out_n
[INFO] [stdout]                                at /opt/rustwide/workdir/src/lib.rs:353:9
[INFO] [stdout]   22:     0x620d0d38fc97 - hmm_tblout[34c9b8be904bc1b8]::tests::in_same_as_out_n::{closure#0}
[INFO] [stdout]                                at /opt/rustwide/workdir/src/lib.rs:335:26
[INFO] [stdout]   23:     0x620d0d38c386 - <hmm_tblout[34c9b8be904bc1b8]::tests::in_same_as_out_n::{closure#0} as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x620d0d39807b - <fn() -> core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   25:     0x620d0d39807b - test[30c43f9fd66fea90]::__rust_begin_short_backtrace::<core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>, fn() -> core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:663:18
[INFO] [stdout]   26:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test_in_process::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:686:74
[INFO] [stdout]   27:     0x620d0d3a4a6b - <core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   28:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panicking::catch_unwind::do_call::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>, core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stdout]   29:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panicking::catch_unwind::<core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>, core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stdout]   30:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panic::catch_unwind::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>, core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stdout]   31:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test_in_process
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:686:27
[INFO] [stdout]   32:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:607:43
[INFO] [stdout]   33:     0x620d0d3a0184 - test[30c43f9fd66fea90]::run_test::{closure#1}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:637:41
[INFO] [stdout]   34:     0x620d0d3a0184 - std[ec4e911328de40a6]::sys::backtrace::__rust_begin_short_backtrace::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:166:18
[INFO] [stdout]   35:     0x620d0d3a7672 - std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/thread/lifecycle.rs:91:13
[INFO] [stdout]   36:     0x620d0d3a7672 - <core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   37:     0x620d0d3a7672 - std[ec4e911328de40a6]::panicking::catch_unwind::do_call::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stdout]   38:     0x620d0d3a7672 - std[ec4e911328de40a6]::panicking::catch_unwind::<(), core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stdout]   39:     0x620d0d3a7672 - std[ec4e911328de40a6]::panic::catch_unwind::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stdout]   40:     0x620d0d3a7672 - std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/thread/lifecycle.rs:89:26
[INFO] [stdout]   41:     0x620d0d3a7672 - <std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1} as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   42:     0x620d0d40e16f - <alloc[c960326de6de28e6]::boxed::Box<dyn core[a96a4c5c53f902a3]::ops::function::FnOnce<(), Output = ()> + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2240:9
[INFO] [stdout]   43:     0x620d0d40e16f - <std[ec4e911328de40a6]::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/thread/unix.rs:118:17
[INFO] [stdout]   44:     0x795642748aa4 - <unknown>
[INFO] [stdout]   45:     0x7956427d5a64 - clone
[INFO] [stdout]   46:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] ---- tests::test_phmmer_write stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'tests::test_phmmer_write' (25) panicked at src/lib.rs:300:9:
[INFO] [stdout] assertion `left == right` failed
[INFO] [stdout]   left: "HBB_HUMAN            -          MYG_ESCGI            -            2.3e-11   30.3   0.1   2.5e-11   30.2   0.1   1.0   1   0   0   1   1   1   1 Human beta hemoglobin.\n"
[INFO] [stdout]  right: "HBB_HUMAN       -          MYG_ESCGI       -            2.30e-11  30.30  0.10   2.50e-11  30.20  0.10  1.00   1   0   0   1   1   1   1 Human beta hemoglobin.\n"
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x620d0d40e85a - std[ec4e911328de40a6]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x620d0d40e85a - std[ec4e911328de40a6]::backtrace_rs::backtrace::trace_unsynchronized::<std[ec4e911328de40a6]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x620d0d40e85a - std[ec4e911328de40a6]::sys::backtrace::_print_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:74:9
[INFO] [stdout]    3:     0x620d0d40e85a - <<std[ec4e911328de40a6]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[a96a4c5c53f902a3]::fmt::Display>::fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:44:26
[INFO] [stdout]    4:     0x620d0d423b8a - <core[a96a4c5c53f902a3]::fmt::rt::Argument>::fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/fmt/rt.rs:152:76
[INFO] [stdout]    5:     0x620d0d423b8a - core[a96a4c5c53f902a3]::fmt::write
[INFO] [stdout]    6:     0x620d0d413162 - std[ec4e911328de40a6]::io::default_write_fmt::<alloc[c960326de6de28e6]::vec::Vec<u8>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x620d0d413162 - <alloc[c960326de6de28e6]::vec::Vec<u8> as std[ec4e911328de40a6]::io::Write>::write_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/io/mod.rs:1994:13
[INFO] [stdout]    8:     0x620d0d3eda3f - <std[ec4e911328de40a6]::sys::backtrace::BacktraceLock>::print
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:47:9
[INFO] [stdout]    9:     0x620d0d3eda3f - std[ec4e911328de40a6]::panicking::default_hook::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:292:27
[INFO] [stdout]   10:     0x620d0d406e19 - std[ec4e911328de40a6]::panicking::default_hook
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:316:9
[INFO] [stdout]   11:     0x620d0d3a3f9c - <alloc[c960326de6de28e6]::boxed::Box<dyn for<'a, 'b> core[a96a4c5c53f902a3]::ops::function::Fn<(&'a std[ec4e911328de40a6]::panic::PanicHookInfo<'b>,), Output = ()> + core[a96a4c5c53f902a3]::marker::Sync + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::Fn<(&std[ec4e911328de40a6]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2254:9
[INFO] [stdout]   12:     0x620d0d3a3f9c - test[30c43f9fd66fea90]::test_main_with_exit_callback::<test[30c43f9fd66fea90]::test_main::{closure#0}>::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:145:21
[INFO] [stdout]   13:     0x620d0d406fd2 - <alloc[c960326de6de28e6]::boxed::Box<dyn for<'a, 'b> core[a96a4c5c53f902a3]::ops::function::Fn<(&'a std[ec4e911328de40a6]::panic::PanicHookInfo<'b>,), Output = ()> + core[a96a4c5c53f902a3]::marker::Sync + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::Fn<(&std[ec4e911328de40a6]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2254:9
[INFO] [stdout]   14:     0x620d0d406fd2 - std[ec4e911328de40a6]::panicking::panic_with_hook
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:833:13
[INFO] [stdout]   15:     0x620d0d3edaf8 - std[ec4e911328de40a6]::panicking::panic_handler::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:698:13
[INFO] [stdout]   16:     0x620d0d3e5499 - std[ec4e911328de40a6]::sys::backtrace::__rust_end_short_backtrace::<std[ec4e911328de40a6]::panicking::panic_handler::{closure#0}, !>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:182:18
[INFO] [stdout]   17:     0x620d0d3ee80d - __rustc[aa69f48705c57ca8]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:689:5
[INFO] [stdout]   18:     0x620d0d42431c - core[a96a4c5c53f902a3]::panicking::panic_fmt
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:80:14
[INFO] [stdout]   19:     0x620d0d4241d3 - core[a96a4c5c53f902a3]::panicking::assert_failed_inner
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:439:17
[INFO] [stdout]   20:     0x620d0d38c873 - core[a96a4c5c53f902a3]::panicking::assert_failed::<alloc[c960326de6de28e6]::string::String, &str>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:394:5
[INFO] [stdout]   21:     0x620d0d393302 - hmm_tblout[34c9b8be904bc1b8]::tests::test_phmmer_write
[INFO] [stdout]                                at /opt/rustwide/workdir/src/lib.rs:300:9
[INFO] [stdout]   22:     0x620d0d38fcc7 - hmm_tblout[34c9b8be904bc1b8]::tests::test_phmmer_write::{closure#0}
[INFO] [stdout]                                at /opt/rustwide/workdir/src/lib.rs:285:27
[INFO] [stdout]   23:     0x620d0d38c3c6 - <hmm_tblout[34c9b8be904bc1b8]::tests::test_phmmer_write::{closure#0} as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x620d0d39807b - <fn() -> core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   25:     0x620d0d39807b - test[30c43f9fd66fea90]::__rust_begin_short_backtrace::<core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>, fn() -> core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:663:18
[INFO] [stdout]   26:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test_in_process::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:686:74
[INFO] [stdout]   27:     0x620d0d3a4a6b - <core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   28:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panicking::catch_unwind::do_call::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>, core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stdout]   29:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panicking::catch_unwind::<core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>, core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stdout]   30:     0x620d0d3a4a6b - std[ec4e911328de40a6]::panic::catch_unwind::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<test[30c43f9fd66fea90]::run_test_in_process::{closure#0}>, core[a96a4c5c53f902a3]::result::Result<(), alloc[c960326de6de28e6]::string::String>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stdout]   31:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test_in_process
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:686:27
[INFO] [stdout]   32:     0x620d0d3a4a6b - test[30c43f9fd66fea90]::run_test::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:607:43
[INFO] [stdout]   33:     0x620d0d3a0184 - test[30c43f9fd66fea90]::run_test::{closure#1}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:637:41
[INFO] [stdout]   34:     0x620d0d3a0184 - std[ec4e911328de40a6]::sys::backtrace::__rust_begin_short_backtrace::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:166:18
[INFO] [stdout]   35:     0x620d0d3a7672 - std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/thread/lifecycle.rs:91:13
[INFO] [stdout]   36:     0x620d0d3a7672 - <core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   37:     0x620d0d3a7672 - std[ec4e911328de40a6]::panicking::catch_unwind::do_call::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stdout]   38:     0x620d0d3a7672 - std[ec4e911328de40a6]::panicking::catch_unwind::<(), core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stdout]   39:     0x620d0d3a7672 - std[ec4e911328de40a6]::panic::catch_unwind::<core[a96a4c5c53f902a3]::panic::unwind_safe::AssertUnwindSafe<std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stdout]   40:     0x620d0d3a7672 - std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked::<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/thread/lifecycle.rs:89:26
[INFO] [stdout]   41:     0x620d0d3a7672 - <std[ec4e911328de40a6]::thread::lifecycle::spawn_unchecked<test[30c43f9fd66fea90]::run_test::{closure#1}, ()>::{closure#1} as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   42:     0x620d0d40e16f - <alloc[c960326de6de28e6]::boxed::Box<dyn core[a96a4c5c53f902a3]::ops::function::FnOnce<(), Output = ()> + core[a96a4c5c53f902a3]::marker::Send> as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2240:9
[INFO] [stdout]   43:     0x620d0d40e16f - <std[ec4e911328de40a6]::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]                                at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/thread/unix.rs:118:17
[INFO] [stdout]   44:     0x795642748aa4 - <unknown>
[INFO] [stdout]   45:     0x7956427d5a64 - clone
[INFO] [stdout]   46:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     tests::in_same_as_out
[INFO] [stdout]     tests::in_same_as_out_n
[INFO] [stdout]     tests::test_phmmer_write
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 7 passed; 3 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "0f78c07d5e7c3384d4b7bc7c3f5fd153067241b9cc8f86eeb7ba6839e25d6759", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0f78c07d5e7c3384d4b7bc7c3f5fd153067241b9cc8f86eeb7ba6839e25d6759", kill_on_drop: false }`
[INFO] [stdout] 0f78c07d5e7c3384d4b7bc7c3f5fd153067241b9cc8f86eeb7ba6839e25d6759
