[INFO] fetching crate rsfgsea 0.3.4...
[INFO] testing rsfgsea-0.3.4 against try#28f95933dc0727396c07b48d0a8cb5211b7fb472 for pr-154065-2
[INFO] extracting crate rsfgsea 0.3.4 into /workspace/builds/worker-0-tc2/source
[INFO] started tweaking crates.io crate rsfgsea 0.3.4
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate rsfgsea 0.3.4
[INFO] tweaked toml for crates.io crate rsfgsea 0.3.4 written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate rsfgsea 0.3.4 on toolchain 28f95933dc0727396c07b48d0a8cb5211b7fb472
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+28f95933dc0727396c07b48d0a8cb5211b7fb472" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate rsfgsea 0.3.4 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+28f95933dc0727396c07b48d0a8cb5211b7fb472" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe
[INFO] running `Command { std: "docker" "start" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe" "/opt/rustwide/cargo-home/bin/cargo" "+28f95933dc0727396c07b48d0a8cb5211b7fb472" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe" "/opt/rustwide/cargo-home/bin/cargo" "+28f95933dc0727396c07b48d0a8cb5211b7fb472" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
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[INFO] [stderr]    Compiling rsfgsea v0.3.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 41s
[INFO] running `Command { std: "docker" "inspect" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe" "/opt/rustwide/cargo-home/bin/cargo" "+28f95933dc0727396c07b48d0a8cb5211b7fb472" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling bitflags v2.10.0
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[INFO] [stderr]    Compiling imageproc v0.26.1
[INFO] [stderr]    Compiling rsfgsea v0.3.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 48.03s
[INFO] running `Command { std: "docker" "inspect" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe" "/opt/rustwide/cargo-home/bin/cargo" "+28f95933dc0727396c07b48d0a8cb5211b7fb472" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.43s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/rsfgsea-c8f938ff6f9efe9f)
[INFO] [stdout] 
[INFO] [stdout] running 17 tests
[INFO] [stdout] test bindings::tests::parse_interface_mode_accepts_supported_values ... ok
[INFO] [stdout] test bindings::tests::resolve_execution_plan_for_cpu_preserves_requested_mode ... ok
[INFO] [stdout] test bindings::tests::resolve_execution_plan_for_gpu_exposes_wrapper_and_explicit_modes ... ok
[INFO] [stdout] test bindings::tests::resolve_execution_plan_rejects_nperm_for_multilevel_gpu ... ok
[INFO] [stdout] test esruler_compat::compare_raw_tests::compare_raw_i64_overflow_falls_back_to_i128 ... ok
[INFO] [stdout] test esruler_compat::compare_raw_tests::compare_raw_fast_path_small_values ... ok
[INFO] [stdout] test esruler_compat::compare_raw_tests::compare_raw_subtraction_overflow_falls_back ... ok
[INFO] [stdout] test esruler_compat::compare_raw_tests::numerator_uses_i128_for_large_values ... ok
[INFO] [stdout] test rng_compat::tests::lecuyer_rounding_sample_kind_matches_r_reference ... ok
[INFO] [stdout] test rng_compat::tests::rounding_sample_kind_matches_r_reference ... ok
[INFO] [stdout] test rng_compat::tests::lecuyer_sample_int_no_replace_matches_r_reference ... ok
[INFO] [stdout] test rng_compat::tests::r_seed_sequence_matches_sample_int_onee9_reference ... ok
[INFO] [stdout] test plot::tests::build_table_plot_data_keeps_requested_order_and_metrics ... ok
[INFO] [stdout] test rng_compat::tests::mt_sample_int_no_replace_matches_small_r_reference ... ok
[INFO] [stdout] test plot::tests::build_plot_data_tracks_hits_and_curve ... ok
[INFO] [stdout] test rng_compat::tests::r_seed_sequence_matches_fgsea_multilevel_group_order_then_seed ... ok
[INFO] [stdout] test rng_compat::tests::mt_sample_int_no_replace_matches_r_reference ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 17 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/rsfgsea-9f1e8d0343e1fd05)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/bin/plot_enrichment.rs (/opt/rustwide/target/debug/deps/rsfgsea_plot_enrichment-bff5f3cda1722526)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/bin/plot_gsea_table.rs (/opt/rustwide/target/debug/deps/rsfgsea_plot_gsea_table-6a17016bf8a2b00e)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/cli_integration.rs (/opt/rustwide/target/debug/deps/cli_integration-92de55e72e89e525)
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test cli_simple_mode_writes_results ... ok
[INFO] [stdout] test plot_cli_dpi_controls_pixel_dimensions ... ok
[INFO] [stdout] test cli_gpu_rejects_non_fgsea_mode_before_adapter_init ... ok
[INFO] [stdout] test plot_cli_writes_png ... ok
[INFO] [stdout] test plot_cli_transparent_background_writes_rgba_png ... ok
[INFO] [stdout] test plot_table_cli_writes_png ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 2.32s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/fgsea_upstream_analogs.rs (/opt/rustwide/target/debug/deps/fgsea_upstream_analogs-05c6d65fb7989602)
[INFO] [stdout] 
[INFO] [stdout] running 22 tests
[INFO] [stdout] test calc_gsea_stat_handles_zero_gene_level_stats_consistently ... ok
[INFO] [stdout] test calc_gsea_stat_returns_zero_for_balanced_case ... ok
[INFO] [stdout] test gmt_reader_loads_pathways ... ok
[INFO] [stdout] test calc_gsea_stat_examples_match_upstream_fgsea_cases ... ok
[INFO] [stdout] test gmt_reader_rejects_malformed_lines ... ok
[INFO] [stdout] test ranked_list_preserves_input_order_within_tied_scores ... ok
[INFO] [stdout] test gmt_reader_reports_the_actual_malformed_line_number ... ok
[INFO] [stdout] test ranked_list_reader_rejects_duplicate_and_non_finite_scores ... ok
[INFO] [stdout] test rust_api_accepts_missing_seed ... ok
[INFO] [stdout] test simple_and_multilevel_return_empty_for_zero_pathways ... ok
[INFO] [stdout] test leading_edge_is_consistent_under_sign_flip_and_positive_score_type ... ok
[INFO] [stdout] test full_universe_gene_set_is_skipped ... ok
[INFO] [stdout] test calc_gsea_stat_leading_edge_matches_upstream_examples ... ok
[INFO] [stdout] test tied_scores_are_deterministic_and_respect_input_order ... ok
[INFO] [stdout] test single_pathway_simple_matches_batched_result_for_that_pathway ... ok
[INFO] [stdout] test score_type_specific_zero_es_cases_do_not_break ... ok
[INFO] [stdout] test fgsea_wrapper_routes_to_simple_when_nperm_is_provided ... ok
[INFO] [stdout] test duplicate_genes_in_gene_sets_are_deduplicated ... ok
[INFO] [stdout] test pathways_with_missing_genes_match_filtered_gene_sets ... ok
[INFO] [stdout] test multilevel_results_are_reproducible_for_fixed_seed ... ok
[INFO] [stdout] test simple_results_are_reproducible_for_fixed_seed ... ok
[INFO] [stdout] test simple_results_match_upstream_reference_when_chunked ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 22 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.35s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/gpu_cpu_tests.rs (/opt/rustwide/target/debug/deps/gpu_cpu_tests-2cf11529d76985ea)
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test calculate_es_stays_within_expected_range ... ok
[INFO] [stdout] test calculate_es_matches_reference_for_top_enriched_pathway ... ok
[INFO] [stdout] test calculate_es_respects_score_type_direction ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/gpu_fgsea_simple_test.rs (/opt/rustwide/target/debug/deps/gpu_fgsea_simple_test-bab0589a7cdf9c07)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/r_validation.rs (/opt/rustwide/target/debug/deps/r_validation-eaa3217bb952d69d)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test tests::test_cross_validation_with_r_fgsea ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/real_data_validation.rs (/opt/rustwide/target/debug/deps/real_data_validation-cd9bf35964020709)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test tests::real_muscle_precision_guard_checks_representative_outputs ... ok
[INFO] [stdout] test tests::test_muscle_data_comparison ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.35s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests rsfgsea
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe", kill_on_drop: false }`
[INFO] [stdout] f4d6071c2a5fc70a9543c2ce1a72b8bb64b17ee5493580b6d5057db3d02a55fe
