[INFO] cloning repository https://github.com/YuanfengZhang/rastair
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/YuanfengZhang/rastair" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FYuanfengZhang%2Frastair", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FYuanfengZhang%2Frastair'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] e755a0c539d0b79f4f706ec6bf88b88edda1c990
[INFO] testing YuanfengZhang/rastair against try#0abe69e6c16114311cc2700e972492e64d69c28f for pr-154065-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FYuanfengZhang%2Frastair" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/YuanfengZhang/rastair
[INFO] finished tweaking git repo https://github.com/YuanfengZhang/rastair
[INFO] tweaked toml for git repo https://github.com/YuanfengZhang/rastair written to /workspace/builds/worker-2-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/YuanfengZhang/rastair on toolchain 0abe69e6c16114311cc2700e972492e64d69c28f
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/YuanfengZhang/rastair already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] dd6de9f1b947d0d339b243d9efab6d24af7d856f374f7c53cf18a6db4ee4e4e8
[INFO] running `Command { std: "docker" "start" "-a" "dd6de9f1b947d0d339b243d9efab6d24af7d856f374f7c53cf18a6db4ee4e4e8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "dd6de9f1b947d0d339b243d9efab6d24af7d856f374f7c53cf18a6db4ee4e4e8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dd6de9f1b947d0d339b243d9efab6d24af7d856f374f7c53cf18a6db4ee4e4e8", kill_on_drop: false }`
[INFO] [stdout] dd6de9f1b947d0d339b243d9efab6d24af7d856f374f7c53cf18a6db4ee4e4e8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 46c1ee8666ebe129bbd941b84ace36d054de6f596deea590d1854a2aa64ea911
[INFO] running `Command { std: "docker" "start" "-a" "46c1ee8666ebe129bbd941b84ace36d054de6f596deea590d1854a2aa64ea911", kill_on_drop: false }`
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[INFO] [stderr]    Compiling serde_derive v1.0.188
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[INFO] [stderr]    Compiling strum_macros v0.25.2
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling regex v1.9.4
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling enum-map-derive v0.6.0
[INFO] [stderr]    Compiling clap_derive v4.5.13
[INFO] [stderr]    Compiling enum-map v1.1.1
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling bgzip v0.3.1
[INFO] [stderr]    Compiling bio-types v1.0.1
[INFO] [stderr]    Compiling clap v4.5.17
[INFO] [stderr]    Compiling clio v0.3.5
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling multimap v0.8.3
[INFO] [stderr]    Compiling csv v1.2.2
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling bio v2.0.3
[INFO] [stderr]    Compiling rust-htslib v0.46.0
[INFO] [stderr]    Compiling rastair v0.9.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `error`
[INFO] [stdout]  --> src/operations/count_variants/mod.rs:4:18
[INFO] [stdout]   |
[INFO] [stdout] 4 | use log::{debug, error};
[INFO] [stdout]   |                  ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/utils/extensions.rs:82:35
[INFO] [stdout]    |
[INFO] [stdout] 82 |     fn from_region_string(region: &str) -> Result<FetchDefinition>;
[INFO] [stdout]    |                                   ^^^^            ^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                                   |
[INFO] [stdout]    |                                   the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 82 |     fn from_region_string(region: &str) -> Result<FetchDefinition<'_>>;
[INFO] [stdout]    |                                                                  ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/utils/extensions.rs:87:35
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn from_region_string(region: &str) -> Result<FetchDefinition>
[INFO] [stdout]    |                                   ^^^^            ^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                                   |
[INFO] [stdout]    |                                   the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn from_region_string(region: &str) -> Result<FetchDefinition<'_>>
[INFO] [stdout]    |                                                                  ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `arg` and `command`
[INFO] [stdout]  --> src/main.rs:2:12
[INFO] [stdout]   |
[INFO] [stdout] 2 | use clap::{arg, command, value_parser, Parser, Subcommand};
[INFO] [stdout]   |            ^^^  ^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 25s
[INFO] running `Command { std: "docker" "inspect" "46c1ee8666ebe129bbd941b84ace36d054de6f596deea590d1854a2aa64ea911", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "46c1ee8666ebe129bbd941b84ace36d054de6f596deea590d1854a2aa64ea911", kill_on_drop: false }`
[INFO] [stdout] 46c1ee8666ebe129bbd941b84ace36d054de6f596deea590d1854a2aa64ea911
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2751e5e4afab0f77bc79e121d3351a33bf0de72f7ee72f00c19b023227913220
[INFO] running `Command { std: "docker" "start" "-a" "2751e5e4afab0f77bc79e121d3351a33bf0de72f7ee72f00c19b023227913220", kill_on_drop: false }`
[INFO] [stderr]    Compiling predicates-core v1.0.6
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling float-cmp v0.9.0
[INFO] [stderr]    Compiling normalize-line-endings v0.3.0
[INFO] [stderr]    Compiling assert_cmd v2.0.14
[INFO] [stderr]    Compiling termtree v0.4.1
[INFO] [stdout] warning: unused import: `error`
[INFO] [stdout]  --> src/operations/count_variants/mod.rs:4:18
[INFO] [stdout]   |
[INFO] [stdout] 4 | use log::{debug, error};
[INFO] [stdout]   |                  ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling difflib v0.4.0
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/utils/extensions.rs:82:35
[INFO] [stdout]    |
[INFO] [stdout] 82 |     fn from_region_string(region: &str) -> Result<FetchDefinition>;
[INFO] [stdout]    |                                   ^^^^            ^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                                   |
[INFO] [stdout]    |                                   the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 82 |     fn from_region_string(region: &str) -> Result<FetchDefinition<'_>>;
[INFO] [stdout]    |                                                                  ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/utils/extensions.rs:87:35
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn from_region_string(region: &str) -> Result<FetchDefinition>
[INFO] [stdout]    |                                   ^^^^            ^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                                   |
[INFO] [stdout]    |                                   the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn from_region_string(region: &str) -> Result<FetchDefinition<'_>>
[INFO] [stdout]    |                                                                  ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling wait-timeout v0.2.0
[INFO] [stdout] warning: unused imports: `arg` and `command`
[INFO] [stdout]  --> src/main.rs:2:12
[INFO] [stdout]   |
[INFO] [stdout] 2 | use clap::{arg, command, value_parser, Parser, Subcommand};
[INFO] [stdout]   |            ^^^  ^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling predicates-tree v1.0.9
[INFO] [stderr]    Compiling predicates v3.1.0
[INFO] [stderr]    Compiling bstr v1.8.0
[INFO] [stderr]    Compiling rastair v0.9.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `error`
[INFO] [stdout]  --> src/operations/count_variants/mod.rs:4:18
[INFO] [stdout]   |
[INFO] [stdout] 4 | use log::{debug, error};
[INFO] [stdout]   |                  ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `arg` and `command`
[INFO] [stdout]  --> src/main.rs:2:12
[INFO] [stdout]   |
[INFO] [stdout] 2 | use clap::{arg, command, value_parser, Parser, Subcommand};
[INFO] [stdout]   |            ^^^  ^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/utils/extensions.rs:82:35
[INFO] [stdout]    |
[INFO] [stdout] 82 |     fn from_region_string(region: &str) -> Result<FetchDefinition>;
[INFO] [stdout]    |                                   ^^^^            ^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                                   |
[INFO] [stdout]    |                                   the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 82 |     fn from_region_string(region: &str) -> Result<FetchDefinition<'_>>;
[INFO] [stdout]    |                                                                  ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/utils/extensions.rs:87:35
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn from_region_string(region: &str) -> Result<FetchDefinition>
[INFO] [stdout]    |                                   ^^^^            ^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                                   |
[INFO] [stdout]    |                                   the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn from_region_string(region: &str) -> Result<FetchDefinition<'_>>
[INFO] [stdout]    |                                                                  ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 6.85s
[INFO] running `Command { std: "docker" "inspect" "2751e5e4afab0f77bc79e121d3351a33bf0de72f7ee72f00c19b023227913220", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2751e5e4afab0f77bc79e121d3351a33bf0de72f7ee72f00c19b023227913220", kill_on_drop: false }`
[INFO] [stdout] 2751e5e4afab0f77bc79e121d3351a33bf0de72f7ee72f00c19b023227913220
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 56d8a31e55b750a562c0f8efc4844e31b115e98b1f2e42bfc9ebaa2d394371bd
[INFO] running `Command { std: "docker" "start" "-a" "56d8a31e55b750a562c0f8efc4844e31b115e98b1f2e42bfc9ebaa2d394371bd", kill_on_drop: false }`
[INFO] [stderr] warning: unused import: `error`
[INFO] [stderr]  --> src/operations/count_variants/mod.rs:4:18
[INFO] [stderr]   |
[INFO] [stderr] 4 | use log::{debug, error};
[INFO] [stderr]   |                  ^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stderr]   --> src/utils/extensions.rs:82:35
[INFO] [stderr]    |
[INFO] [stderr] 82 |     fn from_region_string(region: &str) -> Result<FetchDefinition>;
[INFO] [stderr]    |                                   ^^^^            ^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stderr]    |                                   |
[INFO] [stderr]    |                                   the lifetime is elided here
[INFO] [stderr]    |
[INFO] [stderr]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stderr]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stderr] help: use `'_` for type paths
[INFO] [stderr]    |
[INFO] [stderr] 82 |     fn from_region_string(region: &str) -> Result<FetchDefinition<'_>>;
[INFO] [stderr]    |                                                                  ++++
[INFO] [stderr] 
[INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stderr]   --> src/utils/extensions.rs:87:35
[INFO] [stderr]    |
[INFO] [stderr] 87 |     fn from_region_string(region: &str) -> Result<FetchDefinition>
[INFO] [stderr]    |                                   ^^^^            ^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stderr]    |                                   |
[INFO] [stderr]    |                                   the lifetime is elided here
[INFO] [stderr]    |
[INFO] [stderr]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stderr] help: use `'_` for type paths
[INFO] [stderr]    |
[INFO] [stderr] 87 |     fn from_region_string(region: &str) -> Result<FetchDefinition<'_>>
[INFO] [stderr]    |                                                                  ++++
[INFO] [stderr] 
[INFO] [stderr] warning: `rastair` (lib) generated 3 warnings (run `cargo fix --lib -p rastair` to apply 3 suggestions)
[INFO] [stderr] warning: unused imports: `arg` and `command`
[INFO] [stderr]  --> src/main.rs:2:12
[INFO] [stderr]   |
[INFO] [stderr] 2 | use clap::{arg, command, value_parser, Parser, Subcommand};
[INFO] [stderr]   |            ^^^  ^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `rastair` (bin "rastair") generated 1 warning (run `cargo fix --bin "rastair" -p rastair` to apply 1 suggestion)
[INFO] [stderr] warning: `rastair` (bin "rastair" test) generated 1 warning (1 duplicate)
[INFO] [stderr] warning: `rastair` (lib test) generated 3 warnings (3 duplicates)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.34s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/rastair-0e9541cf76f1cdab)
[INFO] [stdout] 
[INFO] [stdout] running 27 tests
[INFO] [stdout] test operations::count_reads::tests::can_create_config ... ok
[INFO] [stdout] test operations::count_variants::tests::calculate_beta_homozygous_alt ... ok
[INFO] [stdout] test operations::count_variants::tests::test_find_most_abundant_base_with_exclusions ... ok
[INFO] [stdout] test operations::count_variants::tests::calculate_beta_homozygous_ref ... ok
[INFO] [stdout] test operations::count_variants::tests::calculate_beta_heterozygous_non_converted ... ok
[INFO] [stdout] test operations::count_variants::tests::test_find_most_abundant_base_with_exclusions_tie ... ok
[INFO] [stdout] test operations::count_reads::tests::can_create_counter ... FAILED
[INFO] [stdout] test operations::count_variants::tests::calculate_beta_heterozygous_c_to_t ... ok
[INFO] [stdout] test operations::count_variants::variant_counter::tests::can_create_config ... ok
[INFO] [stdout] test operations::tests::can_create_from_string ... ok
[INFO] [stdout] test operations::count_variants::variant_counter::tests::can_filter_alignments ... ok
[INFO] [stdout] test operations::tests::tolerates_zero ... ok
[INFO] [stdout] test operations::count_variants::tests::calculate_beta_heterozygous_g_to_a ... ok
[INFO] [stdout] test sequence_segment::tests::can_check_end ... ok
[INFO] [stdout] test sequence_segment::tests::can_create_segment_iterator ... ok
[INFO] [stdout] test operations::count_variants::variant_counter::tests::can_filter_with_masking_2 ... ok
[INFO] [stdout] test utils::extensions::tests::fail_on_incorrect_string ... ok
[INFO] [stdout] test sequence_segment::tests::can_find_cpgs ... ok
[INFO] [stdout] test sequence_segment::tests::can_iterate ... ok
[INFO] [stdout] test utils::extensions::tests::orientation_easy ... ok
[INFO] [stdout] test utils::extensions::tests::orientation_ambiguous ... ok
[INFO] [stdout] test utils::extensions::tests::orientation_strict ... ok
[INFO] [stdout] test operations::count_variants::variant_counter::tests::can_filter_with_masking_1 ... ok
[INFO] [stdout] test sequence_segment::tests::can_find_split_cpgs ... ok
[INFO] [stdout] test utils::extensions::tests::region_from_string ... ok
[INFO] [stdout] test sequence_segment::tests::can_find_mixed_case ... ok
[INFO] [stdout] test operations::tests::fails_with_letters ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- operations::count_reads::tests::can_create_counter stdout ----
[INFO] [stdout] Error: Failed to read fasta from "test_data/test.fasta"
[INFO] [stdout] 
[INFO] [stdout] Caused by:
[INFO] [stdout]     No such file or directory (os error 2)
[INFO] [stdout] 
[INFO] [stdout] Stack backtrace:
[INFO] [stdout]    0: <csv::error::Error as anyhow::context::ext::StdError>::ext_context::<alloc::string::String>
[INFO] [stdout]              at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/anyhow-1.0.89/src/backtrace.rs:27:14
[INFO] [stdout]    1: <core::result::Result<bio::io::fasta::IndexedReader<std::fs::File>, csv::error::Error> as anyhow::Context<bio::io::fasta::IndexedReader<std::fs::File>, csv::error::Error>>::with_context::<alloc::string::String, <bio::io::fasta::IndexedReader<std::fs::File>>::from_file<&str>::{closure#1}>
[INFO] [stdout]              at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/anyhow-1.0.89/src/context.rs:65:37
[INFO] [stdout]    2: <bio::io::fasta::IndexedReader<std::fs::File>>::from_file::<&str>
[INFO] [stdout]              at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bio-2.0.3/src/io/fasta.rs:420:14
[INFO] [stdout]    3: rastair::operations::count_reads::tests::can_create_counter
[INFO] [stdout]              at ./src/operations/count_reads/mod.rs:936:22
[INFO] [stdout]    4: rastair::operations::count_reads::tests::can_create_counter::{closure#0}
[INFO] [stdout]              at ./src/operations/count_reads/mod.rs:929:32
[INFO] [stdout]    5: <rastair::operations::count_reads::tests::can_create_counter::{closure#0} as core::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]    6: <fn() -> core::result::Result<(), alloc::string::String> as core::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]    7: test::__rust_begin_short_backtrace::<core::result::Result<(), alloc::string::String>, fn() -> core::result::Result<(), alloc::string::String>>
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:663:18
[INFO] [stdout]    8: test::run_test_in_process::{closure#0}
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:686:74
[INFO] [stdout]    9: <core::panic::unwind_safe::AssertUnwindSafe<test::run_test_in_process::{closure#0}> as core::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   10: std::panicking::catch_unwind::do_call::<core::panic::unwind_safe::AssertUnwindSafe<test::run_test_in_process::{closure#0}>, core::result::Result<(), alloc::string::String>>
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stdout]   11: std::panicking::catch_unwind::<core::result::Result<(), alloc::string::String>, core::panic::unwind_safe::AssertUnwindSafe<test::run_test_in_process::{closure#0}>>
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stdout]   12: std::panic::catch_unwind::<core::panic::unwind_safe::AssertUnwindSafe<test::run_test_in_process::{closure#0}>, core::result::Result<(), alloc::string::String>>
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stdout]   13: test::run_test_in_process
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:686:27
[INFO] [stdout]   14: test::run_test::{closure#0}
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:607:43
[INFO] [stdout]   15: test::run_test::{closure#1}
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/test/src/lib.rs:637:41
[INFO] [stdout]   16: std::sys::backtrace::__rust_begin_short_backtrace::<test::run_test::{closure#1}, ()>
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:166:18
[INFO] [stdout]   17: std::thread::lifecycle::spawn_unchecked::<test::run_test::{closure#1}, ()>::{closure#1}::{closure#0}
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/thread/lifecycle.rs:91:13
[INFO] [stdout]   18: <core::panic::unwind_safe::AssertUnwindSafe<std::thread::lifecycle::spawn_unchecked<test::run_test::{closure#1}, ()>::{closure#1}::{closure#0}> as core::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   19: std::panicking::catch_unwind::do_call::<core::panic::unwind_safe::AssertUnwindSafe<std::thread::lifecycle::spawn_unchecked<test::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stdout]   20: std::panicking::catch_unwind::<(), core::panic::unwind_safe::AssertUnwindSafe<std::thread::lifecycle::spawn_unchecked<test::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>>
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stdout]   21: std::panic::catch_unwind::<core::panic::unwind_safe::AssertUnwindSafe<std::thread::lifecycle::spawn_unchecked<test::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stdout]   22: std::thread::lifecycle::spawn_unchecked::<test::run_test::{closure#1}, ()>::{closure#1}
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/thread/lifecycle.rs:89:26
[INFO] [stdout]   23: <std::thread::lifecycle::spawn_unchecked<test::run_test::{closure#1}, ()>::{closure#1} as core::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24: <alloc::boxed::Box<dyn core::ops::function::FnOnce<(), Output = ()> + core::marker::Send> as core::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/alloc/src/boxed.rs:2240:9
[INFO] [stdout]   25: <std::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]              at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/thread/unix.rs:118:17
[INFO] [stdout]   26: <unknown>
[INFO] [stdout]   27: clone
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     operations::count_reads::tests::can_create_counter
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 26 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.32s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "56d8a31e55b750a562c0f8efc4844e31b115e98b1f2e42bfc9ebaa2d394371bd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "56d8a31e55b750a562c0f8efc4844e31b115e98b1f2e42bfc9ebaa2d394371bd", kill_on_drop: false }`
[INFO] [stdout] 56d8a31e55b750a562c0f8efc4844e31b115e98b1f2e42bfc9ebaa2d394371bd
