[INFO] cloning repository https://github.com/fulcrumgenomics/fgumi
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/fulcrumgenomics/fgumi" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffulcrumgenomics%2Ffgumi", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffulcrumgenomics%2Ffgumi'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] bed85499d77512d1e0b8c2ac0106eeec031e49fd
[INFO] testing fulcrumgenomics/fgumi against master#1f7f8ea0721a3b1eb73e6c6d25cccb371434b320 for pr-154065-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffulcrumgenomics%2Ffgumi" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-7-tc1/source/.cargo/config.toml
[INFO] removed /workspace/builds/worker-7-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/fulcrumgenomics/fgumi
[INFO] finished tweaking git repo https://github.com/fulcrumgenomics/fgumi
[INFO] tweaked toml for git repo https://github.com/fulcrumgenomics/fgumi written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/fulcrumgenomics/fgumi on toolchain 1f7f8ea0721a3b1eb73e6c6d25cccb371434b320
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/fulcrumgenomics/fgumi already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded plotters-backend v0.3.7
[INFO] [stderr]   Downloaded mimalloc v0.1.48
[INFO] [stderr]   Downloaded rand_xorshift v0.4.0
[INFO] [stderr]   Downloaded mintex v0.1.4
[INFO] [stderr]   Downloaded thousands v0.2.0
[INFO] [stderr]   Downloaded cpufeatures v0.3.0
[INFO] [stderr]   Downloaded itoa v0.4.8
[INFO] [stderr]   Downloaded murmur3 v0.5.2
[INFO] [stderr]   Downloaded built v0.8.0
[INFO] [stderr]   Downloaded rustc-demangle v0.1.27
[INFO] [stderr]   Downloaded strum v0.24.1
[INFO] [stderr]   Downloaded noodles-bgzf v0.46.0
[INFO] [stderr]   Downloaded matrixmultiply v0.3.10
[INFO] [stderr]   Downloaded half v2.7.1
[INFO] [stderr]   Downloaded dhat v0.3.3
[INFO] [stderr]   Downloaded statrs v0.18.0
[INFO] [stderr]   Downloaded objc2-core-foundation v0.3.1
[INFO] [stderr]   Downloaded plotters v0.3.7
[INFO] [stderr]   Downloaded objc2-io-kit v0.3.1
[INFO] [stderr]   Downloaded addr2line v0.25.1
[INFO] [stderr]   Downloaded bstr v0.2.17
[INFO] [stderr]   Downloaded object v0.37.3
[INFO] [stderr]   Downloaded libmimalloc-sys v0.1.44
[INFO] [stderr]   Downloaded bstr v1.12.1
[INFO] [stderr]   Downloaded nalgebra v0.33.2
[INFO] [stderr]   Downloaded bytesize v2.3.1
[INFO] [stderr]   Downloaded jiff v0.2.23
[INFO] [stderr]   Downloaded backtrace v0.3.76
[INFO] [stderr]   Downloaded lexical-write-integer v1.0.6
[INFO] [stderr]   Downloaded bit-vec v0.8.0
[INFO] [stderr]   Downloaded rand_distr v0.6.0
[INFO] [stderr]   Downloaded noodles-bam v0.86.0
[INFO] [stderr]   Downloaded num-rational v0.4.2
[INFO] [stderr]   Downloaded proptest v1.10.0
[INFO] [stderr]   Downloaded csv v1.1.6
[INFO] [stderr]   Downloaded sysinfo v0.38.3
[INFO] [stderr]   Downloaded wide v1.1.1
[INFO] [stderr]   Downloaded libgit2-sys v0.18.3+1.9.2
[INFO] [stderr]   Downloaded lexical-parse-float v1.0.6
[INFO] [stderr]   Downloaded lexical-parse-integer v1.0.6
[INFO] [stderr]   Downloaded zlib-rs v0.6.3
[INFO] [stderr]   Downloaded libdeflate-sys v1.25.2
[INFO] [stderr]   Downloaded gimli v0.32.3
[INFO] [stderr]   Downloaded tinytemplate v1.2.1
[INFO] [stderr]   Downloaded scoped_threadpool v0.1.9
[INFO] [stderr]   Downloaded criterion v0.8.2
[INFO] [stderr]   Downloaded git2 v0.20.4
[INFO] [stderr]   Downloaded libm v0.2.16
[INFO] [stderr]   Downloaded ntapi v0.4.3
[INFO] [stderr]   Downloaded lexical-write-float v1.0.6
[INFO] [stderr]   Downloaded noodles-vcf v0.84.0
[INFO] [stderr]   Downloaded winnow v0.7.15
[INFO] [stderr]   Downloaded jiff-static v0.2.23
[INFO] [stderr]   Downloaded wide v0.7.33
[INFO] [stderr]   Downloaded safe_arch v1.0.0
[INFO] [stderr]   Downloaded lexical-util v1.0.7
[INFO] [stderr]   Downloaded noodles-sam v0.82.0
[INFO] [stderr]   Downloaded rusty-fork v0.3.1
[INFO] [stderr]   Downloaded criterion-plot v0.8.2
[INFO] [stderr]   Downloaded seq_io v0.3.4
[INFO] [stderr]   Downloaded getrandom v0.4.2
[INFO] [stderr]   Downloaded toml_edit v0.25.4+spec-1.1.0
[INFO] [stderr]   Downloaded rstest v0.26.1
[INFO] [stderr]   Downloaded rand_distr v0.4.3
[INFO] [stderr]   Downloaded r-efi v6.0.0
[INFO] [stderr]   Downloaded safe_arch v0.7.4
[INFO] [stderr]   Downloaded simba v0.9.1
[INFO] [stderr]   Downloaded noodles-csi v0.54.0
[INFO] [stderr]   Downloaded ciborium v0.2.2
[INFO] [stderr]   Downloaded chacha20 v0.10.0
[INFO] [stderr]   Downloaded noodles-fasta v0.60.0
[INFO] [stderr]   Downloaded libdeflater v1.25.2
[INFO] [stderr]   Downloaded noodles-core v0.19.0
[INFO] [stderr]   Downloaded noodles-tabix v0.60.0
[INFO] [stderr]   Downloaded anes v0.1.6
[INFO] [stderr]   Downloaded ciborium-ll v0.2.2
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded unarray v0.1.4
[INFO] [stderr]   Downloaded toml_parser v1.0.9+spec-1.1.0
[INFO] [stderr]   Downloaded quote v1.0.45
[INFO] [stderr]   Downloaded enum_dispatch v0.3.13
[INFO] [stderr]   Downloaded lru v0.16.3
[INFO] [stderr]   Downloaded strum_macros v0.24.3
[INFO] [stderr]   Downloaded read-structure v0.2.0
[INFO] [stderr]   Downloaded num-complex v0.4.6
[INFO] [stderr]   Downloaded bgzf v0.3.0
[INFO] [stderr]   Downloaded serde-aux v4.7.0
[INFO] [stderr]   Downloaded fgoxide v0.6.0
[INFO] [stderr]   Downloaded lexical-core v1.0.6
[INFO] [stderr]   Downloaded noodles v0.106.0
[INFO] [stderr]   Downloaded ciborium-io v0.2.2
[INFO] [stderr]   Downloaded oorandom v11.1.5
[INFO] [stderr]   Downloaded toml_datetime v1.0.0+spec-1.1.0
[INFO] [stderr]   Downloaded cty v0.2.2
[INFO] [stderr]   Downloaded ordered-float v2.10.1
[INFO] [stderr]   Downloaded page_size v0.6.0
[INFO] [stderr]   Downloaded libz-sys v1.1.24
[INFO] [stderr]   Downloaded alloca v0.4.0
[INFO] [stderr]   Downloaded cast v0.3.0
[INFO] [stderr]   Downloaded bit-set v0.8.0
[INFO] [stderr]   Downloaded relative-path v1.9.3
[INFO] [stderr]   Downloaded rstest_macros v0.26.1
[INFO] [stderr]   Downloaded wait-timeout v0.2.1
[INFO] [stderr]   Downloaded plotters-svg v0.3.7
[INFO] [stderr]   Downloaded proc-macro-crate v3.5.0
[INFO] [stderr]   Downloaded rustc-hash v1.1.0
[INFO] [stderr]   Downloaded serde-value v0.7.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 0d887d21f585846a20d733868ae7ce163cbdc880bf0a4c2ca6db3af6abea2d10
[INFO] running `Command { std: "docker" "start" "-a" "0d887d21f585846a20d733868ae7ce163cbdc880bf0a4c2ca6db3af6abea2d10", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0d887d21f585846a20d733868ae7ce163cbdc880bf0a4c2ca6db3af6abea2d10", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0d887d21f585846a20d733868ae7ce163cbdc880bf0a4c2ca6db3af6abea2d10", kill_on_drop: false }`
[INFO] [stdout] 0d887d21f585846a20d733868ae7ce163cbdc880bf0a4c2ca6db3af6abea2d10
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 443cc9c4438507247c0204cb4e5ea2aac2efc86fcebcae5a357e646a8081dc43
[INFO] running `Command { std: "docker" "start" "-a" "443cc9c4438507247c0204cb4e5ea2aac2efc86fcebcae5a357e646a8081dc43", kill_on_drop: false }`
[INFO] [stderr]    Compiling quote v1.0.45
[INFO] [stderr]    Compiling libc v0.2.182
[INFO] [stderr]    Compiling find-msvc-tools v0.1.9
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling libm v0.2.16
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]    Compiling stable_deref_trait v1.2.1
[INFO] [stderr]    Compiling simd-adler32 v0.3.8
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling bytes v1.11.1
[INFO] [stderr]    Compiling zlib-rs v0.6.3
[INFO] [stderr]    Compiling allocator-api2 v0.2.21
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]    Compiling foldhash v0.2.0
[INFO] [stderr]    Compiling lexical-util v1.0.7
[INFO] [stderr]    Compiling writeable v0.6.2
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling litemap v0.8.1
[INFO] [stderr]    Compiling icu_properties_data v2.1.2
[INFO] [stderr]    Compiling icu_normalizer_data v2.1.1
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling zerocopy v0.8.40
[INFO] [stderr]    Compiling hashbrown v0.16.1
[INFO] [stderr]    Compiling bitflags v2.11.0
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling lexical-write-integer v1.0.6
[INFO] [stderr]    Compiling lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling smallvec v1.15.1
[INFO] [stderr]    Compiling anyhow v1.0.102
[INFO] [stderr]    Compiling rand_core v0.10.0
[INFO] [stderr]    Compiling lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling getrandom v0.4.2
[INFO] [stderr]    Compiling lexical-write-float v1.0.6
[INFO] [stderr]    Compiling zmij v1.0.21
[INFO] [stderr]    Compiling percent-encoding v2.3.2
[INFO] [stderr]    Compiling utf8_iter v1.0.4
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling getrandom v0.2.17
[INFO] [stderr]    Compiling form_urlencoded v1.2.2
[INFO] [stderr]    Compiling indexmap v2.13.0
[INFO] [stderr]    Compiling lexical-core v1.0.6
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling colorchoice v1.0.4
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]    Compiling anstyle v1.0.13
[INFO] [stderr]    Compiling anstyle-query v1.1.5
[INFO] [stderr]    Compiling once_cell v1.21.3
[INFO] [stderr]    Compiling cc v1.2.56
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.2
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling iana-time-zone v0.1.65
[INFO] [stderr]    Compiling itoa v1.0.17
[INFO] [stderr]    Compiling paste v1.0.15
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling anstream v0.6.21
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling csv-core v0.1.13
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling linux-raw-sys v0.12.1
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling ryu v1.0.23
[INFO] [stderr]    Compiling log v0.4.29
[INFO] [stderr]    Compiling rustversion v1.0.22
[INFO] [stderr]    Compiling cpufeatures v0.3.0
[INFO] [stderr]    Compiling rayon-core v1.13.0
[INFO] [stderr]    Compiling itoa v0.4.8
[INFO] [stderr]    Compiling chacha20 v0.10.0
[INFO] [stderr]    Compiling crossbeam-deque v0.8.6
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling parking_lot_core v0.9.12
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling fgumi-dna v0.1.2 (/opt/rustwide/workdir/crates/fgumi-dna)
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling strsim v0.11.1
[INFO] [stderr]    Compiling clap_lex v1.0.0
[INFO] [stderr]    Compiling ordered-float v2.10.1
[INFO] [stderr]    Compiling chrono v0.4.44
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling clap_builder v4.5.60
[INFO] [stderr]    Compiling rand v0.10.0
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling lock_api v0.4.14
[INFO] [stderr]    Compiling jiff v0.2.23
[INFO] [stderr]    Compiling flate2 v1.1.9
[INFO] [stderr]    Compiling strum v0.24.1
[INFO] [stderr]    Compiling rayon v1.11.0
[INFO] [stderr]    Compiling rand_distr v0.6.0
[INFO] [stderr]    Compiling libdeflate-sys v1.25.2
[INFO] [stderr]    Compiling libz-sys v1.1.24
[INFO] [stderr]    Compiling libgit2-sys v0.18.3+1.9.2
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.44
[INFO] [stderr]    Compiling parking_lot v0.12.5
[INFO] [stderr]    Compiling itertools v0.14.0
[INFO] [stderr]    Compiling lru v0.16.3
[INFO] [stderr]    Compiling tempfile v3.26.0
[INFO] [stderr]    Compiling bstr v1.12.1
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling crossbeam-queue v0.3.12
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1f7f8ea0721a3b1eb73e6c6d25cccb371434b320/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/syn-2.0.117/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="fold"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="visit"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("clone-impls", "default", "derive", "extra-traits", "fold", "full", "parsing", "printing", "proc-macro", "test", "visit", "visit-mut"))' -C metadata=a9f0f1bf52f49136 -C extra-filename=-e0faf52aa5e48801 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-d4cb564e807a9cd7.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-aa2c5b8519914b46.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-8c98a1a0e58216a9.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "443cc9c4438507247c0204cb4e5ea2aac2efc86fcebcae5a357e646a8081dc43", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "443cc9c4438507247c0204cb4e5ea2aac2efc86fcebcae5a357e646a8081dc43", kill_on_drop: false }`
[INFO] [stdout] 443cc9c4438507247c0204cb4e5ea2aac2efc86fcebcae5a357e646a8081dc43
