[INFO] cloning repository https://github.com/hikari20XX/SeqSeeker
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/hikari20XX/SeqSeeker" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhikari20XX%2FSeqSeeker", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhikari20XX%2FSeqSeeker'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 6df97a74a70cce6df4afc5741b292a5e5a75db13
[INFO] checking hikari20XX/SeqSeeker against e4d5758286bf2cf6f415802f2cf861747a7c6c8c for pr-152972
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhikari20XX%2FSeqSeeker" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/hikari20XX/SeqSeeker
[INFO] finished tweaking git repo https://github.com/hikari20XX/SeqSeeker
[INFO] tweaked toml for git repo https://github.com/hikari20XX/SeqSeeker written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/hikari20XX/SeqSeeker on toolchain e4d5758286bf2cf6f415802f2cf861747a7c6c8c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e4d5758286bf2cf6f415802f2cf861747a7c6c8c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/hikari20XX/SeqSeeker already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e4d5758286bf2cf6f415802f2cf861747a7c6c8c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking hikari20XX/SeqSeeker against e4d5758286bf2cf6f415802f2cf861747a7c6c8c for pr-152972
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhikari20XX%2FSeqSeeker" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/hikari20XX/SeqSeeker
[INFO] finished tweaking git repo https://github.com/hikari20XX/SeqSeeker
[INFO] tweaked toml for git repo https://github.com/hikari20XX/SeqSeeker written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/hikari20XX/SeqSeeker on toolchain e4d5758286bf2cf6f415802f2cf861747a7c6c8c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e4d5758286bf2cf6f415802f2cf861747a7c6c8c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/hikari20XX/SeqSeeker already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e4d5758286bf2cf6f415802f2cf861747a7c6c8c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded quote v1.0.41
[INFO] [stderr]   Downloaded statrs v0.16.1
[INFO] [stderr]   Downloaded simba v0.6.0
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] [stderr]   Downloaded windows-targets v0.53.4
[INFO] [stderr]   Downloaded ufmt-macros v0.3.0
[INFO] [stderr]   Downloaded nalgebra-macros v0.1.0
[INFO] [stderr]   Downloaded stability v0.2.1
[INFO] [stderr]   Downloaded signal-hook-mio v0.2.4
[INFO] [stderr]   Downloaded ufmt-write v0.1.0
[INFO] [stderr]   Downloaded byteordered v0.6.0
[INFO] [stderr]   Downloaded lexical-core v0.8.5
[INFO] [stderr]   Downloaded bit-vec v0.7.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.29.0
[INFO] [stderr]   Downloaded libdeflater v0.13.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.32.0
[INFO] [stderr]   Downloaded noodles-gff v0.33.0
[INFO] [stderr]   Downloaded noodles-csi v0.35.0
[INFO] [stderr]   Downloaded index_list v0.2.17
[INFO] [stderr]   Downloaded noodles-csi v0.37.0
[INFO] [stderr]   Downloaded lexical-parse-integer v0.8.6
[INFO] [stderr]   Downloaded noodles-bgzf v0.30.0
[INFO] [stderr]   Downloaded lexical-write-integer v0.8.5
[INFO] [stderr]   Downloaded noodles-bam v0.62.0
[INFO] [stderr]   Downloaded attohttpc v0.25.0
[INFO] [stderr]   Downloaded rust-lapper v1.2.0
[INFO] [stderr]   Downloaded compact_str v0.7.1
[INFO] [stderr]   Downloaded flate2 v1.1.4
[INFO] [stderr]   Downloaded noodles-sam v0.62.0
[INFO] [stderr]   Downloaded lexical-write-float v0.8.5
[INFO] [stderr]   Downloaded lexical-util v0.8.5
[INFO] [stderr]   Downloaded noodles-sam v0.59.0
[INFO] [stderr]   Downloaded crossterm v0.27.0
[INFO] [stderr]   Downloaded ufmt v0.2.0
[INFO] [stderr]   Downloaded regex v1.11.3
[INFO] [stderr]   Downloaded lexical-parse-float v0.8.5
[INFO] [stderr]   Downloaded libdeflate-sys v0.13.0
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] [stderr]   Downloaded bstr v1.12.0
[INFO] [stderr]   Downloaded ratatui v0.26.3
[INFO] [stderr]   Downloaded regex-automata v0.4.11
[INFO] [stderr]   Downloaded libc v0.2.176
[INFO] [stderr]   Downloaded bigtools v0.5.6
[INFO] [stderr]   Downloaded noodles-csi v0.34.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8
[INFO] running `Command { std: "docker" "start" "0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8" "/opt/rustwide/cargo-home/bin/cargo" "+e4d5758286bf2cf6f415802f2cf861747a7c6c8c" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8" "/opt/rustwide/cargo-home/bin/cargo" "+e4d5758286bf2cf6f415802f2cf861747a7c6c8c" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.101
[INFO] [stderr]    Compiling unicode-ident v1.0.19
[INFO] [stderr]    Compiling quote v1.0.41
[INFO] [stderr]     Checking cfg-if v1.0.3
[INFO] [stderr]    Compiling libc v0.2.176
[INFO] [stderr]     Checking bytes v1.10.1
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking simd-adler32 v0.3.7
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]     Checking hashbrown v0.16.0
[INFO] [stderr]     Checking smallvec v1.15.1
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr]     Checking crc32fast v1.5.0
[INFO] [stderr]     Checking log v0.4.28
[INFO] [stderr]     Checking lexical-util v0.8.5
[INFO] [stderr]     Checking bstr v1.12.0
[INFO] [stderr]    Compiling zerocopy v0.8.27
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]     Checking bitflags v2.9.4
[INFO] [stderr]     Checking either v1.15.0
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]     Checking anstyle-parse v0.2.7
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.1
[INFO] [stderr]    Compiling signal-hook v0.3.18
[INFO] [stderr]     Checking anstyle v1.0.13
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking lexical-write-integer v0.8.5
[INFO] [stderr]     Checking lexical-parse-integer v0.8.6
[INFO] [stderr]     Checking anstyle-query v1.1.4
[INFO] [stderr]     Checking flate2 v1.1.4
[INFO] [stderr]     Checking noodles-core v0.15.0
[INFO] [stderr]     Checking futures-core v0.3.31
[INFO] [stderr]     Checking colorchoice v1.0.4
[INFO] [stderr]     Checking futures-sink v0.3.31
[INFO] [stderr]     Checking bytemuck v1.24.0
[INFO] [stderr]     Checking lexical-parse-float v0.8.5
[INFO] [stderr]     Checking anstream v0.6.21
[INFO] [stderr]     Checking lexical-write-float v0.8.5
[INFO] [stderr]    Compiling libdeflate-sys v0.13.0
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]     Checking futures-channel v0.3.31
[INFO] [stderr]     Checking indexmap v2.11.4
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]    Compiling rustix v1.1.2
[INFO] [stderr]     Checking regex-syntax v0.8.6
[INFO] [stderr]    Compiling rustls v0.21.12
[INFO] [stderr]     Checking noodles-bgzf v0.29.0
[INFO] [stderr]    Compiling syn v2.0.106
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking lexical-core v0.8.5
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking form_urlencoded v1.2.2
[INFO] [stderr]     Checking crossbeam-epoch v0.9.18
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]     Checking clap_lex v0.7.5
[INFO] [stderr]    Compiling rayon-core v1.13.0
[INFO] [stderr]     Checking strsim v0.11.1
[INFO] [stderr]     Checking linux-raw-sys v0.11.0
[INFO] [stderr]    Compiling anyhow v1.0.100
[INFO] [stderr]     Checking getrandom v0.2.16
[INFO] [stderr]     Checking signal-hook-registry v1.4.6
[INFO] [stderr]     Checking num_cpus v1.17.0
[INFO] [stderr]     Checking mio v0.8.11
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking http v0.2.12
[INFO] [stderr]     Checking noodles-csi v0.34.0
[INFO] [stderr]     Checking clap_builder v4.5.48
[INFO] [stderr]     Checking signal-hook-mio v0.2.4
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]     Checking rustls-native-certs v0.6.3
[INFO] [stderr]     Checking crossbeam-deque v0.8.6
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking noodles-bgzf v0.30.0
[INFO] [stderr]     Checking noodles-bgzf v0.32.0
[INFO] [stderr]     Checking itertools v0.13.0
[INFO] [stderr]     Checking regex-automata v0.4.11
[INFO] [stderr]     Checking castaway v0.2.4
[INFO] [stderr]     Checking bit-vec v0.7.0
[INFO] [stderr]     Checking fastrand v2.3.0
[INFO] [stderr]     Checking unicode-segmentation v1.12.0
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]     Checking winnow v0.7.14
[INFO] [stderr]    Compiling serde_json v1.0.145
[INFO] [stderr]     Checking once_cell v1.21.3
[INFO] [stderr]     Checking ufmt-write v0.1.0
[INFO] [stderr]     Checking toml_write v0.1.2
[INFO] [stderr]     Checking noodles-csi v0.37.0
[INFO] [stderr]     Checking noodles-csi v0.35.0
[INFO] [stderr]     Checking compact_str v0.7.1
[INFO] [stderr]     Checking noodles-sam v0.59.0
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking crossterm v0.27.0
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]     Checking itertools v0.12.1
[INFO] [stderr]     Checking byteordered v0.6.0
[INFO] [stderr]     Checking jiff v0.2.15
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking cassowary v0.3.0
[INFO] [stderr]     Checking tempfile v3.23.0
[INFO] [stderr]     Checking unicode-truncate v1.1.0
[INFO] [stderr]     Checking index_list v0.2.17
[INFO] [stderr]     Checking noodles-sam v0.62.0
[INFO] [stderr]     Checking rayon v1.11.0
[INFO] [stderr]     Checking noodles-bam v0.62.0
[INFO] [stderr]     Checking noodles-gff v0.33.0
[INFO] [stderr]     Checking rust-lapper v1.2.0
[INFO] [stderr]     Checking ordered-float v4.6.0
[INFO] [stderr]     Checking regex v1.11.3
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling ufmt-macros v0.3.0
[INFO] [stderr]     Checking libdeflater v0.13.0
[INFO] [stderr]     Checking env_filter v0.1.3
[INFO] [stderr]     Checking rustls-webpki v0.101.7
[INFO] [stderr]     Checking sct v0.7.1
[INFO] [stderr]     Checking webpki v0.22.4
[INFO] [stderr]     Checking ufmt v0.2.0
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.8.1
[INFO] [stderr]    Compiling zerovec-derive v0.11.2
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling futures-macro v0.3.31
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling tokio-macros v2.5.0
[INFO] [stderr]    Compiling clap_derive v4.5.47
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling stability v0.2.1
[INFO] [stderr]     Checking tokio v1.47.1
[INFO] [stderr]     Checking futures-util v0.3.31
[INFO] [stderr]     Checking env_logger v0.11.8
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking zerofrom v0.1.6
[INFO] [stderr]     Checking yoke v0.8.1
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]     Checking ratatui v0.26.3
[INFO] [stderr]     Checking zerovec v0.11.5
[INFO] [stderr]     Checking zerotrie v0.2.3
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]     Checking clap v4.5.48
[INFO] [stderr]     Checking tinystr v0.8.2
[INFO] [stderr]     Checking potential_utf v0.1.4
[INFO] [stderr]     Checking icu_collections v2.1.1
[INFO] [stderr]     Checking icu_locale_core v2.1.1
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]     Checking toml_datetime v0.6.11
[INFO] [stderr]     Checking serde_spanned v0.6.9
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking icu_provider v2.1.1
[INFO] [stderr]     Checking toml_edit v0.22.27
[INFO] [stderr]     Checking icu_normalizer v2.1.1
[INFO] [stderr]     Checking icu_properties v2.1.2
[INFO] [stderr]     Checking futures-executor v0.3.31
[INFO] [stderr]     Checking futures v0.3.31
[INFO] [stderr]     Checking idna_adapter v1.2.1
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking toml v0.8.23
[INFO] [stderr]     Checking url v2.5.7
[INFO] [stderr]     Checking attohttpc v0.25.0
[INFO] [stderr]     Checking bigtools v0.5.6
[INFO] [stderr]     Checking statrs v0.16.1
[INFO] [stderr]     Checking seqseeker v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr] warning: unused dependency `noodles-gff`
[INFO] [stderr]   --> Cargo.toml:10:1
[INFO] [stderr]    |
[INFO] [stderr] 10 | noodles-gff = "0.33"
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::unused_dependencies` is set to `warn` by default
[INFO] [stderr] help: consider removing the dependency on `noodles-gff`
[INFO] [stderr] warning: `seqseeker` (manifest) generated 1 warning
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 20.33s
[INFO] running `Command { std: "docker" "inspect" "0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8", kill_on_drop: false }`
[INFO] [stdout] 0381727cbc7744774c24c10319024beb313a9ee6d3bd658b0936f59ac02a81d8
