[INFO] cloning repository https://github.com/informationsea/sequencetoolkit
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/informationsea/sequencetoolkit" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 9cb4d8c1296395af550005a385efd7d521aa15f3
[INFO] checking informationsea/sequencetoolkit against master#7ad4e69ad585d8ff214f7b42d01f1959eda08f40 for pr-152543
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/informationsea/sequencetoolkit
[INFO] finished tweaking git repo https://github.com/informationsea/sequencetoolkit
[INFO] tweaked toml for git repo https://github.com/informationsea/sequencetoolkit written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/informationsea/sequencetoolkit on toolchain 7ad4e69ad585d8ff214f7b42d01f1959eda08f40
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7ad4e69ad585d8ff214f7b42d01f1959eda08f40" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/informationsea/sequencetoolkit already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7ad4e69ad585d8ff214f7b42d01f1959eda08f40" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded itoa v0.4.8
[INFO] [stderr]   Downloaded ryu v1.0.22
[INFO] [stderr]   Downloaded vcf v0.6.1
[INFO] [stderr]   Downloaded xlsxwriter v0.6.1
[INFO] [stderr]   Downloaded pretty_env_logger v0.5.0
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded temp-file v0.1.9
[INFO] [stderr]   Downloaded quote v0.6.13
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded rustc-demangle v0.1.27
[INFO] [stderr]   Downloaded autocompress v0.6.0
[INFO] [stderr]   Downloaded rmp v0.8.15
[INFO] [stderr]   Downloaded proc-macro2 v0.4.30
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded rmp-serde v1.3.1
[INFO] [stderr]   Downloaded statrs v0.16.1
[INFO] [stderr]   Downloaded syn v0.15.44
[INFO] [stderr]   Downloaded clap_builder v4.5.55
[INFO] [stderr]   Downloaded rust-htslib v0.44.1
[INFO] [stderr]   Downloaded ndarray v0.15.6
[INFO] [stderr]   Downloaded bindgen v0.69.5
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] [stderr]   Downloaded unicode-xid v0.1.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded getset v0.1.6
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded zerocopy-derive v0.8.35
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded clap v4.5.55
[INFO] [stderr]   Downloaded bgzip v0.3.1
[INFO] [stderr]   Downloaded nalgebra-macros v0.1.0
[INFO] [stderr]   Downloaded simba v0.6.0
[INFO] [stderr]   Downloaded env_logger v0.10.2
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded bio v3.0.0
[INFO] [stderr]   Downloaded zerocopy v0.8.35
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded libz-sys v1.1.23
[INFO] [stderr]   Downloaded itertools v0.9.0
[INFO] [stderr]   Downloaded multimap v0.9.1
[INFO] [stderr]   Downloaded strum v0.25.0
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded libxlsxwriter-sys v1.1.7
[INFO] [stderr]   Downloaded curl-sys v0.4.85+curl-8.18.0
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded openssl-src v300.5.5+3.5.5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:61361fe0aef631f17e9d025a70c5a647956f8c671dd02950a60ad3f5cc5526d7" "/opt/rustwide/cargo-home/bin/cargo" "+7ad4e69ad585d8ff214f7b42d01f1959eda08f40" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 833055292df17c552e03bb62c3c4295c3b77b6c2ac5508fc2e1900fc8e2d005e
[INFO] running `Command { std: "docker" "start" "-a" "833055292df17c552e03bb62c3c4295c3b77b6c2ac5508fc2e1900fc8e2d005e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "833055292df17c552e03bb62c3c4295c3b77b6c2ac5508fc2e1900fc8e2d005e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "833055292df17c552e03bb62c3c4295c3b77b6c2ac5508fc2e1900fc8e2d005e", kill_on_drop: false }`
[INFO] [stdout] 833055292df17c552e03bb62c3c4295c3b77b6c2ac5508fc2e1900fc8e2d005e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:61361fe0aef631f17e9d025a70c5a647956f8c671dd02950a60ad3f5cc5526d7" "/opt/rustwide/cargo-home/bin/cargo" "+7ad4e69ad585d8ff214f7b42d01f1959eda08f40" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] db11476ba75abe89fdc907394763d391839b20b94397095905fc7001be297060
[INFO] running `Command { std: "docker" "start" "-a" "db11476ba75abe89fdc907394763d391839b20b94397095905fc7001be297060", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.180
[INFO] [stderr]    Compiling find-msvc-tools v0.1.8
[INFO] [stderr]     Checking memchr v2.7.6
[INFO] [stderr]    Compiling zerocopy v0.8.35
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling proc-macro2 v1.0.106
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking simd-adler32 v0.3.8
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]     Checking regex-syntax v0.8.8
[INFO] [stderr]     Checking bytes v1.11.0
[INFO] [stderr]    Compiling rustversion v1.0.22
[INFO] [stderr]     Checking clap_lex v0.7.7
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]     Checking clap_builder v4.5.55
[INFO] [stderr]     Checking bytemuck v1.24.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]     Checking flate2 v1.1.8
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]     Checking tokio v1.49.0
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking ryu v1.0.22
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]    Compiling quote v1.0.44
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking indexmap v2.13.0
[INFO] [stderr]     Checking csv-core v0.1.13
[INFO] [stderr]    Compiling syn v2.0.114
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]    Compiling rustix v0.38.44
[INFO] [stderr]     Checking getrandom v0.2.17
[INFO] [stderr]    Compiling prettyplease v0.2.37
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]    Compiling cc v1.2.54
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking ordered-float v5.1.0
[INFO] [stderr]     Checking itertools v0.12.1
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling linux-raw-sys v0.4.15
[INFO] [stderr]     Checking regex-automata v0.4.13
[INFO] [stderr]     Checking csv v1.4.0
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling cmake v0.1.57
[INFO] [stderr]    Compiling openssl-src v300.5.5+3.5.5
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]     Checking rand_core v0.9.5
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling home v0.5.12
[INFO] [stderr]    Compiling log v0.4.29
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling derefable v0.1.0
[INFO] [stderr]     Checking percent-encoding v2.3.2
[INFO] [stderr]    Compiling lexical-core v0.7.6
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]     Checking form_urlencoded v1.2.2
[INFO] [stderr]    Compiling nom v5.1.3
[INFO] [stderr]     Checking arrayvec v0.5.2
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]    Compiling libz-sys v1.1.23
[INFO] [stderr]    Compiling openssl-sys v0.9.111
[INFO] [stderr]    Compiling curl-sys v0.4.85+curl-8.18.0
[INFO] [stderr] error: could not compile `simba` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/7ad4e69ad585d8ff214f7b42d01f1959eda08f40/bin/rustc --crate-name simba --edition=2018 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/simba-0.6.0/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="std"' --cfg 'feature="wide"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("cordic", "decimal", "default", "fixed", "libm", "libm_force", "packed_simd", "partial_fixed_point_support", "rand", "serde", "serde_serialize", "std", "wide"))' -C metadata=d338cf793689ea4f -C extra-filename=-218429dbf0fac2e0 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern approx=/opt/rustwide/target/debug/deps/libapprox-a45fabaa4284413c.rmeta --extern num_complex=/opt/rustwide/target/debug/deps/libnum_complex-d229972552afeea8.rmeta --extern num_traits=/opt/rustwide/target/debug/deps/libnum_traits-b0ab957f0a86187b.rmeta --extern paste=/opt/rustwide/target/debug/deps/libpaste-c5e5e8a2bd161c29.so --extern wide=/opt/rustwide/target/debug/deps/libwide-4e00eb95c519d01f.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "db11476ba75abe89fdc907394763d391839b20b94397095905fc7001be297060", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "db11476ba75abe89fdc907394763d391839b20b94397095905fc7001be297060", kill_on_drop: false }`
[INFO] [stdout] db11476ba75abe89fdc907394763d391839b20b94397095905fc7001be297060