[INFO] cloning repository https://github.com/38/pyd4
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/38/pyd4" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] ae36c59429e1ac7bc38bf4a4e6f3f2942bf58526
[INFO] checking 38/pyd4 against try#54cf65b8d066c082e536455049b95943cf30378f for pr-151920
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/38/pyd4
[INFO] finished tweaking git repo https://github.com/38/pyd4
[INFO] tweaked toml for git repo https://github.com/38/pyd4 written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/38/pyd4 on toolchain 54cf65b8d066c082e536455049b95943cf30378f
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+54cf65b8d066c082e536455049b95943cf30378f" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/38/pyd4 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+54cf65b8d066c082e536455049b95943cf30378f" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:61361fe0aef631f17e9d025a70c5a647956f8c671dd02950a60ad3f5cc5526d7" "/opt/rustwide/cargo-home/bin/cargo" "+54cf65b8d066c082e536455049b95943cf30378f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f6200b815a4af002fb7841704a2bb808a0bb28fdc994146a808b500d069ac95d
[INFO] running `Command { std: "docker" "start" "-a" "f6200b815a4af002fb7841704a2bb808a0bb28fdc994146a808b500d069ac95d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f6200b815a4af002fb7841704a2bb808a0bb28fdc994146a808b500d069ac95d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f6200b815a4af002fb7841704a2bb808a0bb28fdc994146a808b500d069ac95d", kill_on_drop: false }`
[INFO] [stdout] f6200b815a4af002fb7841704a2bb808a0bb28fdc994146a808b500d069ac95d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:61361fe0aef631f17e9d025a70c5a647956f8c671dd02950a60ad3f5cc5526d7" "/opt/rustwide/cargo-home/bin/cargo" "+54cf65b8d066c082e536455049b95943cf30378f" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 6831a8472918e706a5ba417106417f03b08ff81b829f7305097cb176d27f2ff6
[INFO] running `Command { std: "docker" "start" "-a" "6831a8472918e706a5ba417106417f03b08ff81b829f7305097cb176d27f2ff6", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.99
[INFO] [stderr]    Compiling proc-macro2 v1.0.28
[INFO] [stderr]    Compiling syn v1.0.74
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling crossbeam-utils v0.8.5
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling proc-macro-hack v0.5.19
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]    Compiling memoffset v0.6.4
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling unicode-width v0.1.8
[INFO] [stderr]    Compiling termcolor v1.1.2
[INFO] [stderr]    Compiling libloading v0.7.0
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling bindgen v0.55.1
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.5
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling serde v1.0.127
[INFO] [stderr]    Compiling crc32fast v1.2.1
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling rayon-core v1.9.1
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling rayon v1.5.1
[INFO] [stderr]    Compiling clang-sys v1.2.0
[INFO] [stderr]     Checking instant v0.1.10
[INFO] [stderr]    Compiling serde_json v1.0.66
[INFO] [stderr]    Compiling serde_derive v1.0.127
[INFO] [stderr]    Compiling inventory v0.1.10
[INFO] [stderr]     Checking crossbeam-channel v0.5.1
[INFO] [stderr]     Checking ppv-lite86 v0.2.10
[INFO] [stderr]    Compiling unindent v0.1.7
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]     Checking getrandom v0.1.16
[INFO] [stderr]     Checking crossbeam-deque v0.8.1
[INFO] [stderr]     Checking num_cpus v1.13.0
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]     Checking smallvec v1.6.1
[INFO] [stderr]     Checking flate2 v1.0.20
[INFO] [stderr]     Checking memmap v0.7.0
[INFO] [stderr]     Checking rand_core v0.5.1
[INFO] [stderr]     Checking lock_api v0.4.4
[INFO] [stderr]     Checking itoa v0.4.7
[INFO] [stderr]    Compiling pyo3 v0.12.4
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]     Checking rand_chacha v0.2.2
[INFO] [stderr]     Checking parking_lot_core v0.8.3
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]     Checking parking_lot v0.11.1
[INFO] [stderr]     Checking rand v0.7.3
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]     Checking paste v0.1.18
[INFO] [stderr]    Compiling cexpr v0.4.0
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]     Checking d4-framefile v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)
[INFO] [stderr]    Compiling pyo3-derive-backend v0.12.4
[INFO] [stderr]    Compiling ctor v0.1.20
[INFO] [stderr]    Compiling inventory-impl v0.1.10
[INFO] [stderr]    Compiling indoc-impl v0.3.6
[INFO] [stderr]    Compiling ghost v0.1.2
[INFO] [stderr]     Checking indoc v0.3.6
[INFO] [stderr]    Compiling pyo3cls v0.12.4
[INFO] [stderr]    Compiling d4-hts v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)
[INFO] [stderr] error: failed to run custom build command for `d4-hts v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-fc385804e2adc63a/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stderr
[INFO] [stderr]   + pushd /opt/rustwide/target/debug/build/d4-hts-8f98ca97f4945f12/out
[INFO] [stderr]   + HTSLIB_VERSION=1.11
[INFO] [stderr]   + rm -rf /opt/rustwide/target/debug/build/d4-hts-8f98ca97f4945f12/out/htslib
[INFO] [stderr]   + git clone -b 1.11 https://github.com/samtools/htslib.git
[INFO] [stderr]   Cloning into 'htslib'...
[INFO] [stderr]   fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (1558) panicked at /opt/rustwide/cargo-home/git/checkouts/d4-format-aae4f10fa7ab24bd/fe86a8f/d4-hts/build.rs:34:5:
[INFO] [stderr]   assertion failed: Command::new("bash").args(&["build_htslib.sh",
[INFO] [stderr]                                           &version]).stdout(std::process::Stdio::null()).spawn().expect("Unable to build htslib").wait().unwrap().success()
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x5b8d8df6997a - std[2b8fb8c27541df22]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x5b8d8df6997a - std[2b8fb8c27541df22]::backtrace_rs::backtrace::trace_unsynchronized::<std[2b8fb8c27541df22]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x5b8d8df6997a - std[2b8fb8c27541df22]::sys::backtrace::_print_fmt
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/sys/backtrace.rs:74:9
[INFO] [stderr]      3:     0x5b8d8df6997a - <<std[2b8fb8c27541df22]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[ce8ad42acf3c47be]::fmt::Display>::fmt
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/sys/backtrace.rs:44:26
[INFO] [stderr]      4:     0x5b8d8df8077a - <core[ce8ad42acf3c47be]::fmt::rt::Argument>::fmt
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/core/src/fmt/rt.rs:152:76
[INFO] [stderr]      5:     0x5b8d8df8077a - core[ce8ad42acf3c47be]::fmt::write
[INFO] [stderr]      6:     0x5b8d8df6fe72 - std[2b8fb8c27541df22]::io::default_write_fmt::<std[2b8fb8c27541df22]::sys::stdio::unix::Stderr>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/io/mod.rs:639:11
[INFO] [stderr]      7:     0x5b8d8df6fe72 - <std[2b8fb8c27541df22]::sys::stdio::unix::Stderr as std[2b8fb8c27541df22]::io::Write>::write_fmt
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/io/mod.rs:1994:13
[INFO] [stderr]      8:     0x5b8d8df4b70f - <std[2b8fb8c27541df22]::sys::backtrace::BacktraceLock>::print
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/sys/backtrace.rs:47:9
[INFO] [stderr]      9:     0x5b8d8df4b70f - std[2b8fb8c27541df22]::panicking::default_hook::{closure#0}
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:292:27
[INFO] [stderr]     10:     0x5b8d8df64291 - std[2b8fb8c27541df22]::panicking::default_hook
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:319:9
[INFO] [stderr]     11:     0x5b8d8df644fb - std[2b8fb8c27541df22]::panicking::panic_with_hook
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:825:13
[INFO] [stderr]     12:     0x5b8d8df4b7fa - std[2b8fb8c27541df22]::panicking::panic_handler::{closure#0}
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:691:13
[INFO] [stderr]     13:     0x5b8d8df40939 - std[2b8fb8c27541df22]::sys::backtrace::__rust_end_short_backtrace::<std[2b8fb8c27541df22]::panicking::panic_handler::{closure#0}, !>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/sys/backtrace.rs:182:18
[INFO] [stderr]     14:     0x5b8d8df4c13d - __rustc[23a7528c93bdc9b2]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:689:5
[INFO] [stderr]     15:     0x5b8d8df80f6c - core[ce8ad42acf3c47be]::panicking::panic_fmt
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/core/src/panicking.rs:80:14
[INFO] [stderr]     16:     0x5b8d8df80f32 - core[ce8ad42acf3c47be]::panicking::panic
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/core/src/panicking.rs:150:5
[INFO] [stderr]     17:     0x5b8d8dbb34ac - build_script_build[828f344b98ab1ee4]::build_own_htslib
[INFO] [stderr]     18:     0x5b8d8dbb3c71 - build_script_build[828f344b98ab1ee4]::main
[INFO] [stderr]     19:     0x5b8d8dbb5683 - <fn() -> core[ce8ad42acf3c47be]::result::Result<(), std[2b8fb8c27541df22]::io::error::Error> as core[ce8ad42acf3c47be]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]     20:     0x5b8d8dbb2806 - std[2b8fb8c27541df22]::sys::backtrace::__rust_begin_short_backtrace::<fn() -> core[ce8ad42acf3c47be]::result::Result<(), std[2b8fb8c27541df22]::io::error::Error>, core[ce8ad42acf3c47be]::result::Result<(), std[2b8fb8c27541df22]::io::error::Error>>
[INFO] [stderr]     21:     0x5b8d8dbb2b39 - std[2b8fb8c27541df22]::rt::lang_start::<core[ce8ad42acf3c47be]::result::Result<(), std[2b8fb8c27541df22]::io::error::Error>>::{closure#0}
[INFO] [stderr]     22:     0x5b8d8df633e6 - <&dyn core[ce8ad42acf3c47be]::ops::function::Fn<(), Output = i32> + core[ce8ad42acf3c47be]::marker::Sync + core[ce8ad42acf3c47be]::panic::unwind_safe::RefUnwindSafe as core[ce8ad42acf3c47be]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     23:     0x5b8d8df633e6 - std[2b8fb8c27541df22]::panicking::catch_unwind::do_call::<&dyn core[ce8ad42acf3c47be]::ops::function::Fn<(), Output = i32> + core[ce8ad42acf3c47be]::marker::Sync + core[ce8ad42acf3c47be]::panic::unwind_safe::RefUnwindSafe, i32>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:581:40
[INFO] [stderr]     24:     0x5b8d8df633e6 - std[2b8fb8c27541df22]::panicking::catch_unwind::<i32, &dyn core[ce8ad42acf3c47be]::ops::function::Fn<(), Output = i32> + core[ce8ad42acf3c47be]::marker::Sync + core[ce8ad42acf3c47be]::panic::unwind_safe::RefUnwindSafe>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:544:19
[INFO] [stderr]     25:     0x5b8d8df633e6 - std[2b8fb8c27541df22]::panic::catch_unwind::<&dyn core[ce8ad42acf3c47be]::ops::function::Fn<(), Output = i32> + core[ce8ad42acf3c47be]::marker::Sync + core[ce8ad42acf3c47be]::panic::unwind_safe::RefUnwindSafe, i32>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panic.rs:359:14
[INFO] [stderr]     26:     0x5b8d8df633e6 - std[2b8fb8c27541df22]::rt::lang_start_internal::{closure#0}
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/rt.rs:175:24
[INFO] [stderr]     27:     0x5b8d8df633e6 - std[2b8fb8c27541df22]::panicking::catch_unwind::do_call::<std[2b8fb8c27541df22]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:581:40
[INFO] [stderr]     28:     0x5b8d8df633e6 - std[2b8fb8c27541df22]::panicking::catch_unwind::<isize, std[2b8fb8c27541df22]::rt::lang_start_internal::{closure#0}>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panicking.rs:544:19
[INFO] [stderr]     29:     0x5b8d8df633e6 - std[2b8fb8c27541df22]::panic::catch_unwind::<std[2b8fb8c27541df22]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/panic.rs:359:14
[INFO] [stderr]     30:     0x5b8d8df633e6 - std[2b8fb8c27541df22]::rt::lang_start_internal
[INFO] [stderr]                                  at /rustc/54cf65b8d066c082e536455049b95943cf30378f/library/std/src/rt.rs:171:5
[INFO] [stderr]     31:     0x5b8d8dbb2751 - std[2b8fb8c27541df22]::rt::lang_start::<core[ce8ad42acf3c47be]::result::Result<(), std[2b8fb8c27541df22]::io::error::Error>>
[INFO] [stderr]     32:     0x5b8d8dbb5995 - main
[INFO] [stderr]     33:     0x78a5d8aed1ca - <unknown>
[INFO] [stderr]     34:     0x78a5d8aed28b - __libc_start_main
[INFO] [stderr]     35:     0x5b8d8dbb1a25 - _start
[INFO] [stderr]     36:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "6831a8472918e706a5ba417106417f03b08ff81b829f7305097cb176d27f2ff6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6831a8472918e706a5ba417106417f03b08ff81b829f7305097cb176d27f2ff6", kill_on_drop: false }`
[INFO] [stdout] 6831a8472918e706a5ba417106417f03b08ff81b829f7305097cb176d27f2ff6
