[INFO] cloning repository https://github.com/hiroki-chen/coxphfitter
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/hiroki-chen/coxphfitter" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhiroki-chen%2Fcoxphfitter", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhiroki-chen%2Fcoxphfitter'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 29f8816f3ae7024680414ba0cf3dbd094d2dff8b
[INFO] checking hiroki-chen/coxphfitter against master#d9563937fa3b030c5845811113505070109414d2 for pr-151830
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhiroki-chen%2Fcoxphfitter" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-5-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/hiroki-chen/coxphfitter
[INFO] finished tweaking git repo https://github.com/hiroki-chen/coxphfitter
[INFO] tweaked toml for git repo https://github.com/hiroki-chen/coxphfitter written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/hiroki-chen/coxphfitter on toolchain d9563937fa3b030c5845811113505070109414d2
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/hiroki-chen/polars.git`
[INFO] [stderr]     Updating git repository `https://github.com/hiroki-chen/picachv`
[INFO] [stderr]     Updating git submodule `https://github.com/hiroki-chen/picachv-case-study.git`
[INFO] [stderr]     Updating git submodule `https://github.com/hiroki-chen/pcd-proof.git`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]      Locking 352 packages to latest compatible versions
[INFO] [stderr]       Adding lax v0.15.0 (available: v0.18.0)
[INFO] [stderr]       Adding nalgebra v0.33.2 (available: v0.34.1)
[INFO] [stderr]       Adding ndarray v0.15.6 (available: v0.17.2)
[INFO] [stderr]       Adding ndarray-linalg v0.15.0 (available: v0.18.1)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded array-init-cursor v0.2.1
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[INFO] [stderr]   Downloaded recursive v0.1.1
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[INFO] [stderr]   Downloaded polars-arrow-format v0.1.0
[INFO] [stderr]   Downloaded psm v0.1.30
[INFO] [stderr]   Downloaded erased-serde v0.4.10
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[INFO] [stderr]   Downloaded ntapi v0.4.3
[INFO] [stderr]   Downloaded lapack-sys v0.12.1
[INFO] [stderr]   Downloaded lapack v0.18.0
[INFO] [stderr]   Downloaded ndarray-linalg v0.15.0
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[INFO] [stderr]   Downloaded itoap v1.0.1
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[INFO] [stderr]   Downloaded prost-types v0.12.6
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[INFO] [stderr]   Downloaded arrow-data v51.0.0
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[INFO] [stderr]   Downloaded parse_duration v2.1.1
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[INFO] [stderr]   Downloaded prost v0.12.6
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:61361fe0aef631f17e9d025a70c5a647956f8c671dd02950a60ad3f5cc5526d7" "/opt/rustwide/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d33d4cc2dc3a8f91d083f8234b2a73ee69ee23136345546e6d3872fe5aa61974
[INFO] running `Command { std: "docker" "start" "-a" "d33d4cc2dc3a8f91d083f8234b2a73ee69ee23136345546e6d3872fe5aa61974", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d33d4cc2dc3a8f91d083f8234b2a73ee69ee23136345546e6d3872fe5aa61974", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d33d4cc2dc3a8f91d083f8234b2a73ee69ee23136345546e6d3872fe5aa61974", kill_on_drop: false }`
[INFO] [stdout] d33d4cc2dc3a8f91d083f8234b2a73ee69ee23136345546e6d3872fe5aa61974
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:61361fe0aef631f17e9d025a70c5a647956f8c671dd02950a60ad3f5cc5526d7" "/opt/rustwide/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 82bd143ca78aed476e539eb7a7fbcb6ab0a7efbee57333b62dfc0c73c5495e1d
[INFO] running `Command { std: "docker" "start" "-a" "82bd143ca78aed476e539eb7a7fbcb6ab0a7efbee57333b62dfc0c73c5495e1d", kill_on_drop: false }`
[INFO] [stderr]    Compiling quote v1.0.45
[INFO] [stderr]    Compiling unicode-ident v1.0.24
[INFO] [stderr]    Compiling libc v0.2.182
[INFO] [stderr]    Compiling libm v0.2.16
[INFO] [stderr]     Checking cfg-if v1.0.4
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling zerocopy v0.8.40
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling getrandom v0.3.4
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[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
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[INFO] [stderr]    Compiling proc-macro2 v1.0.106
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[INFO] [stderr]    Compiling regex-automata v0.4.14
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[INFO] [stderr]    Compiling tempfile v3.26.0
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[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling num-rational v0.2.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling polars-utils v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
[INFO] [stderr]    Compiling typeid v1.0.3
[INFO] [stderr]    Compiling multimap v0.10.1
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[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
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[INFO] [stderr]    Compiling jemalloc-sys v0.5.4+5.3.0-patched
[INFO] [stderr]    Compiling regex v1.12.3
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[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling polars-arrow v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
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[INFO] [stderr]     Checking base64 v0.22.1
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[INFO] [stderr]    Compiling proc-macro-crate v3.5.0
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[INFO] [stderr]    Compiling polars-compute v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
[INFO] [stderr]     Checking bitmaps v3.2.1
[INFO] [stderr]    Compiling polars-core v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
[INFO] [stderr]     Checking xxhash-rust v0.8.15
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[INFO] [stderr]    Compiling polars-ops v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
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[INFO] [stderr]    Compiling polars-plan v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
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[INFO] [stderr]    Compiling polars-lazy v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
[INFO] [stderr]    Compiling polars v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
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[INFO] [stderr]    Compiling coxfitter v0.1.0 (/opt/rustwide/workdir)
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[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling prost-derive v0.12.6
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[INFO] [stderr]     Checking picachv-error v0.1.0 (https://github.com/hiroki-chen/picachv#01df1dd2)
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[INFO] [stderr]    Compiling picachv-message v0.1.0 (https://github.com/hiroki-chen/picachv#01df1dd2)
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[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking lz4 v1.28.1
[INFO] [stderr]     Checking uuid v1.21.0
[INFO] [stderr]     Checking num v0.4.3
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking lapack v0.18.0
[INFO] [stderr]     Checking cauchy v0.4.0
[INFO] [stderr]     Checking arrow-buffer v51.0.0
[INFO] [stderr]     Checking arrow-data v51.0.0
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[INFO] [stderr]     Checking arrow-array v51.0.0
[INFO] [stderr]     Checking ndarray_einsum_beta v0.7.0
[INFO] [stderr]     Checking ndarray-linalg v0.15.0
[INFO] [stderr]     Checking arrow-select v51.0.0
[INFO] [stderr]     Checking arrow-cast v51.0.0
[INFO] [stderr]     Checking arrow-ipc v51.0.0
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]     Checking parquet v51.0.0
[INFO] [stderr]     Checking jemallocator v0.5.4
[INFO] [stderr]     Checking picachv-core v0.1.0 (https://github.com/hiroki-chen/picachv#01df1dd2)
[INFO] [stderr]     Checking polars-row v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
[INFO] [stderr]     Checking polars-parquet v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
[INFO] [stderr]     Checking picachv-monitor v0.1.0 (https://github.com/hiroki-chen/picachv#01df1dd2)
[INFO] [stderr]     Checking picachv-api v0.1.0 (https://github.com/hiroki-chen/picachv#01df1dd2)
[INFO] [stderr]     Checking picachv v0.1.0 (https://github.com/hiroki-chen/picachv#01df1dd2)
[INFO] [stderr]     Checking polars-io v0.39.2 (https://github.com/hiroki-chen/polars.git?rev=cbdb9b#cbdb9b3e)
[INFO] [stdout] warning: unused variable: `hessian`
[INFO] [stdout]    --> src/lib.rs:482:28
[INFO] [stdout]     |
[INFO] [stdout] 482 |         let (mut beta, ll, hessian) = self.newton_raphson_for_efron_model(
[INFO] [stdout]     |                            ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_hessian`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `norm_mean` is never read
[INFO] [stdout]    --> src/lib.rs:183:5
[INFO] [stdout]     |
[INFO] [stdout] 173 | pub struct CoxProcessedDf {
[INFO] [stdout]     |            -------------- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 183 |     norm_mean: Array1<f64>,
[INFO] [stdout]     |     ^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `CoxProcessedDf` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `hessian`
[INFO] [stdout]    --> src/lib.rs:482:28
[INFO] [stdout]     |
[INFO] [stdout] 482 |         let (mut beta, ll, hessian) = self.newton_raphson_for_efron_model(
[INFO] [stdout]     |                            ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_hessian`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `norm_mean` is never read
[INFO] [stdout]    --> src/lib.rs:183:5
[INFO] [stdout]     |
[INFO] [stdout] 173 | pub struct CoxProcessedDf {
[INFO] [stdout]     |            -------------- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 183 |     norm_mean: Array1<f64>,
[INFO] [stdout]     |     ^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `CoxProcessedDf` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [optimized + debuginfo] target(s) in 3m 06s
[INFO] running `Command { std: "docker" "inspect" "82bd143ca78aed476e539eb7a7fbcb6ab0a7efbee57333b62dfc0c73c5495e1d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "82bd143ca78aed476e539eb7a7fbcb6ab0a7efbee57333b62dfc0c73c5495e1d", kill_on_drop: false }`
[INFO] [stdout] 82bd143ca78aed476e539eb7a7fbcb6ab0a7efbee57333b62dfc0c73c5495e1d