[INFO] cloning repository https://github.com/genhub-bio/gen
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/genhub-bio/gen" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenhub-bio%2Fgen", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenhub-bio%2Fgen'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 03d79dcf1b76bb7ad41bdc627ead988922feb597
[INFO] checking genhub-bio/gen against master#d9563937fa3b030c5845811113505070109414d2 for pr-151830
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenhub-bio%2Fgen" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/genhub-bio/gen
[INFO] finished tweaking git repo https://github.com/genhub-bio/gen
[INFO] tweaked toml for git repo https://github.com/genhub-bio/gen written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/genhub-bio/gen on toolchain d9563937fa3b030c5845811113505070109414d2
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/genhub-bio/gen already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded simple-easing v1.0.2
[INFO] [stderr]   Downloaded more-asserts v0.3.1
[INFO] [stderr]   Downloaded serial_test_derive v3.4.0
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[INFO] [stderr]   Downloaded intervaltree v0.2.7
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[INFO] [stderr]   Downloaded gix-utils v0.3.1
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[INFO] [stderr]   Downloaded gix-hashtable v0.10.0
[INFO] [stderr]   Downloaded cargo-deny v0.18.9
[INFO] [stderr]   Downloaded zlib-rs v0.6.2
[INFO] [stderr]   Downloaded toml v0.9.12+spec-1.1.0
[INFO] [stderr]   Downloaded rustsec v0.31.0
[INFO] [stderr]   Downloaded gix-pathspec v0.13.0
[INFO] [stderr]   Downloaded gix-transport v0.50.0
[INFO] [stderr]   Downloaded gix-command v0.6.5
[INFO] [stderr]   Downloaded gix-bitmap v0.2.16
[INFO] [stderr]   Downloaded gix-fs v0.17.0
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[INFO] [stderr]   Downloaded regex-cursor v0.1.5
[INFO] [stderr]   Downloaded rat-text v3.0.3
[INFO] [stderr]   Downloaded serde_with v3.17.0
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[INFO] [stderr]   Downloaded scc v2.4.0
[INFO] [stderr]   Downloaded scroll v0.13.0
[INFO] [stderr]   Downloaded cvss v2.2.0
[INFO] [stderr]   Downloaded gix-ref v0.55.0
[INFO] [stderr]   Downloaded gix-credentials v0.32.0
[INFO] [stderr]   Downloaded gix-attributes v0.28.1
[INFO] [stderr]   Downloaded gix-ignore v0.17.1
[INFO] [stderr]   Downloaded libz-rs-sys v0.5.5
[INFO] [stderr]   Downloaded gix-features v0.44.1
[INFO] [stderr]   Downloaded ropey v1.6.1
[INFO] [stderr]   Downloaded noodles-cram v0.86.0
[INFO] [stderr]   Downloaded lexical-util v1.0.7
[INFO] [stderr]   Downloaded rat-cursor v2.0.0
[INFO] [stderr]   Downloaded rat-event v2.0.4
[INFO] [stderr]   Downloaded gb-io v0.8.0
[INFO] [stderr]   Downloaded tui-widget-list v0.15.0
[INFO] [stderr]   Downloaded insta v1.46.3
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[INFO] [stderr]   Downloaded gix-config v0.48.0
[INFO] [stderr]   Downloaded gix-revision v0.37.0
[INFO] [stderr]   Downloaded gix-prompt v0.11.2
[INFO] [stderr]   Downloaded gix-traverse v0.49.0
[INFO] [stderr]   Downloaded ruzstd v0.8.2
[INFO] [stderr]   Downloaded lexical-write-float v1.0.6
[INFO] [stderr]   Downloaded noodles-sam v0.79.0
[INFO] [stderr]   Downloaded noodles-vcf v0.81.0
[INFO] [stderr]   Downloaded js-sys v0.3.90
[INFO] [stderr]   Downloaded gix-submodule v0.22.0
[INFO] [stderr]   Downloaded cargo-config2 v0.1.42
[INFO] [stderr]   Downloaded cargo-llvm-cov v0.6.24
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[INFO] [stderr]   Downloaded schemars v1.2.1
[INFO] [stderr]   Downloaded async-compression v0.4.41
[INFO] [stderr]   Downloaded gix-url v0.33.2
[INFO] [stderr]   Downloaded zlib-rs v0.5.5
[INFO] [stderr]   Downloaded gix v0.75.0
[INFO] [stderr]   Downloaded indicatif v0.18.4
[INFO] [stderr]   Downloaded cached v0.55.1
[INFO] [stderr]   Downloaded capnpc v0.24.1
[INFO] [stderr]   Downloaded noodles-bcf v0.78.0
[INFO] [stderr]   Downloaded noodles-bam v0.83.0
[INFO] [stderr]   Downloaded lexical-write-integer v1.0.6
[INFO] [stderr]   Downloaded noodles-tabix v0.57.0
[INFO] [stderr]   Downloaded wasm-bindgen-macro-support v0.2.113
[INFO] [stderr]   Downloaded wasm-bindgen v0.2.113
[INFO] [stderr]   Downloaded gix-validate v0.10.1
[INFO] [stderr]   Downloaded tame-index v0.25.0
[INFO] [stderr]   Downloaded toml v1.0.3+spec-1.1.0
[INFO] [stderr]   Downloaded serde_with_macros v3.17.0
[INFO] [stderr]   Downloaded noodles-fasta v0.56.0
[INFO] [stderr]   Downloaded lexical-parse-integer v1.0.6
[INFO] [stderr]   Downloaded noodles-bgzf v0.43.0
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[INFO] [stderr]   Downloaded noodles-csi v0.51.0
[INFO] [stderr]   Downloaded noodles v0.101.0
[INFO] [stderr]   Downloaded rusqlite_migration v1.3.1
[INFO] [stderr]   Downloaded deranged v0.5.8
[INFO] [stderr]   Downloaded sdd v3.0.10
[INFO] [stderr]   Downloaded bon-macros v3.9.0
[INFO] [stderr]   Downloaded bon v3.9.0
[INFO] [stderr]   Downloaded gix-sec v0.12.2
[INFO] [stderr]   Downloaded gix-packetline v0.20.0
[INFO] [stderr]   Downloaded gix-tempfile v19.0.1
[INFO] [stderr]   Downloaded rustc-stable-hash v0.1.2
[INFO] [stderr]   Downloaded smol_str v0.3.5
[INFO] [stderr]   Downloaded toml-span v0.6.0
[INFO] [stderr]   Downloaded fs-err v3.3.0
[INFO] [stderr]   Downloaded opener v0.8.4
[INFO] [stderr]   Downloaded redox_syscall v0.7.2
[INFO] [stderr]   Downloaded console v0.16.2
[INFO] [stderr]   Downloaded iset v0.3.1
[INFO] [stderr]   Downloaded rat-focus v2.0.2
[INFO] [stderr]   Downloaded wasm-bindgen-futures v0.4.63
[INFO] [stderr]   Downloaded bzip2 v0.6.1
[INFO] [stderr]   Downloaded noodles-gff v0.52.0
[INFO] [stderr]   Downloaded lexopt v0.3.1
[INFO] [stderr]   Downloaded clap-nested-commands v0.0.6
[INFO] [stderr]   Downloaded convert_case v0.8.0
[INFO] [stderr]   Downloaded directories v6.0.0
[INFO] [stderr]   Downloaded html-escape v0.2.13
[INFO] [stderr]   Downloaded format_num_pattern v0.9.4
[INFO] [stderr]   Downloaded rat-scrolled v2.0.1
[INFO] [stderr]   Downloaded xz2 v0.1.7
[INFO] [stderr]   Downloaded noodles-fastq v0.21.0
[INFO] [stderr]   Downloaded wasm-bindgen-shared v0.2.113
[INFO] [stderr]   Downloaded target-lexicon v0.13.3
[INFO] [stderr]   Downloaded interavl v0.3.0
[INFO] [stderr]   Downloaded noodles-bed v0.28.0
[INFO] [stderr]   Downloaded compression-codecs v0.4.37
[INFO] [stderr]   Downloaded noodles-gtf v0.47.0
[INFO] [stderr]   Downloaded lexical-core v1.0.6
[INFO] [stderr]   Downloaded circular v0.3.0
[INFO] [stderr]   Downloaded serde_bytes v0.11.19
[INFO] [stderr]   Downloaded utf8-width v0.1.8
[INFO] [stderr]   Downloaded unit-prefix v0.5.2
[INFO] [stderr]   Downloaded unicode-display-width v0.3.0
[INFO] [stderr]   Downloaded url-parse v1.0.10
[INFO] [stderr]   Downloaded ftree v1.3.0
[INFO] [stderr]   Downloaded wasm-bindgen-macro v0.2.113
[INFO] [stderr]   Downloaded rat-reloc v2.0.2
[INFO] [stderr]   Downloaded cached_proc_macro v0.24.0
[INFO] [stderr]   Downloaded cached_proc_macro_types v0.1.1
[INFO] [stderr]   Downloaded colorsys v0.6.7
[INFO] [stderr]   Downloaded embedded-io v0.7.1
[INFO] [stderr]   Downloaded spdx v0.13.3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:61361fe0aef631f17e9d025a70c5a647956f8c671dd02950a60ad3f5cc5526d7" "/opt/rustwide/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 47fccc5bec67d93de784506a4b46e1d2fd3560e6ded57c84ea0f698d100e6dda
[INFO] running `Command { std: "docker" "start" "-a" "47fccc5bec67d93de784506a4b46e1d2fd3560e6ded57c84ea0f698d100e6dda", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "47fccc5bec67d93de784506a4b46e1d2fd3560e6ded57c84ea0f698d100e6dda", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "47fccc5bec67d93de784506a4b46e1d2fd3560e6ded57c84ea0f698d100e6dda", kill_on_drop: false }`
[INFO] [stdout] 47fccc5bec67d93de784506a4b46e1d2fd3560e6ded57c84ea0f698d100e6dda
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:61361fe0aef631f17e9d025a70c5a647956f8c671dd02950a60ad3f5cc5526d7" "/opt/rustwide/cargo-home/bin/cargo" "+d9563937fa3b030c5845811113505070109414d2" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] cdb1621ca4bd69d15852e3113a8345bf35cb4874d3280e8dba53c7b2de4651e7
[INFO] running `Command { std: "docker" "start" "-a" "cdb1621ca4bd69d15852e3113a8345bf35cb4874d3280e8dba53c7b2de4651e7", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.182
[INFO] [stderr]     Checking memchr v2.8.0
[INFO] [stderr]     Checking smallvec v1.15.1
[INFO] [stderr]     Checking regex-syntax v0.8.10
[INFO] [stderr]     Checking bytes v1.11.1
[INFO] [stderr]     Checking foldhash v0.2.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.106
[INFO] [stderr]     Checking bitflags v2.11.0
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]     Checking crc32fast v1.5.0
[INFO] [stderr]     Checking futures-core v0.3.32
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]     Checking gix-trace v0.1.18
[INFO] [stderr]    Compiling find-msvc-tools v0.1.9
[INFO] [stderr]     Checking crypto-common v0.1.7
[INFO] [stderr]     Checking linux-raw-sys v0.12.1
[INFO] [stderr]     Checking futures-sink v0.3.32
[INFO] [stderr]     Checking hashbrown v0.16.1
[INFO] [stderr]     Checking gix-utils v0.3.1
[INFO] [stderr]     Checking digest v0.10.7
[INFO] [stderr]     Checking slab v0.4.12
[INFO] [stderr]     Checking futures-channel v0.3.32
[INFO] [stderr]     Checking zlib-rs v0.5.5
[INFO] [stderr]     Checking futures-io v0.3.32
[INFO] [stderr]     Checking futures-task v0.3.32
[INFO] [stderr]    Compiling heapless v0.8.0
[INFO] [stderr]    Compiling getrandom v0.4.1
[INFO] [stderr]     Checking hash32 v0.3.1
[INFO] [stderr]     Checking simd-adler32 v0.3.8
[INFO] [stderr]     Checking zlib-rs v0.6.2
[INFO] [stderr]     Checking ryu v1.0.23
[INFO] [stderr]     Checking jiff v0.2.21
[INFO] [stderr]    Compiling quote v1.0.44
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]     Checking futures-util v0.3.32
[INFO] [stderr]     Checking indexmap v2.13.0
[INFO] [stderr]     Checking winnow v0.7.14
[INFO] [stderr]     Checking sha1 v0.10.6
[INFO] [stderr]     Checking faster-hex v0.10.0
[INFO] [stderr]    Compiling zerocopy v0.8.39
[INFO] [stderr]     Checking sha1-checked v0.10.0
[INFO] [stderr]     Checking libz-rs-sys v0.5.5
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking errno v0.3.14
[INFO] [stderr]     Checking mio v1.1.1
[INFO] [stderr]     Checking socket2 v0.6.2
[INFO] [stderr]     Checking signal-hook-registry v1.4.8
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]    Compiling cc v1.2.56
[INFO] [stderr]     Checking regex-automata v0.4.14
[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]     Checking signal-hook v0.3.18
[INFO] [stderr]     Checking prodash v30.0.1
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]     Checking memmap2 v0.9.10
[INFO] [stderr]     Checking tempfile v3.26.0
[INFO] [stderr]    Compiling capnp v0.24.1
[INFO] [stderr]     Checking serde_json v1.0.149
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]    Compiling instability v0.3.11
[INFO] [stderr]     Checking compact_str v0.9.0
[INFO] [stderr]     Checking rand_core v0.9.5
[INFO] [stderr]     Checking sha2 v0.10.9
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]    Compiling anyhow v1.0.102
[INFO] [stderr]    Compiling libm v0.2.16
[INFO] [stderr]     Checking fallible-iterator v0.3.0
[INFO] [stderr]     Checking fallible-streaming-iterator v0.1.9
[INFO] [stderr]     Checking unicode-truncate v2.0.1
[INFO] [stderr]     Checking futures v0.3.32
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking http v1.4.0
[INFO] [stderr]     Checking lru v0.16.3
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking signal-hook-mio v0.2.5
[INFO] [stderr]     Checking uuid v1.21.0
[INFO] [stderr]     Checking zeroize v1.8.2
[INFO] [stderr]    Compiling convert_case v0.10.0
[INFO] [stderr]     Checking getrandom v0.2.17
[INFO] [stderr]     Checking rustls-pki-types v1.14.0
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling darling_core v0.23.0
[INFO] [stderr]    Compiling darling_core v0.20.11
[INFO] [stderr]     Checking http-body v1.0.1
[INFO] [stderr]     Checking tracing-core v0.1.36
[INFO] [stderr]     Checking pure-rust-locales v0.8.2
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/d9563937fa3b030c5845811113505070109414d2/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/syn-2.0.117/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="fold"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="visit"' --cfg 'feature="visit-mut"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("clone-impls", "default", "derive", "extra-traits", "fold", "full", "parsing", "printing", "proc-macro", "test", "visit", "visit-mut"))' -C metadata=ceb78e5bef6e4cb3 -C extra-filename=-7c7437438a104b4b --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-d4cb564e807a9cd7.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-28532d321a976b97.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-8c98a1a0e58216a9.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "cdb1621ca4bd69d15852e3113a8345bf35cb4874d3280e8dba53c7b2de4651e7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cdb1621ca4bd69d15852e3113a8345bf35cb4874d3280e8dba53c7b2de4651e7", kill_on_drop: false }`
[INFO] [stdout] cdb1621ca4bd69d15852e3113a8345bf35cb4874d3280e8dba53c7b2de4651e7