[INFO] fetching crate aardvark-bio 0.10.4... [INFO] checking aardvark-bio-0.10.4 against master#36e2b8a3a7aad93f8a92db6d254b746aa94ed6da for pr-151822 [INFO] extracting crate aardvark-bio 0.10.4 into /workspace/builds/worker-6-tc1/source [INFO] started tweaking crates.io crate aardvark-bio 0.10.4 [INFO] finished tweaking crates.io crate aardvark-bio 0.10.4 [INFO] tweaked toml for crates.io crate aardvark-bio 0.10.4 written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate aardvark-bio 0.10.4 on toolchain 36e2b8a3a7aad93f8a92db6d254b746aa94ed6da [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+36e2b8a3a7aad93f8a92db6d254b746aa94ed6da" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate aardvark-bio 0.10.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+36e2b8a3a7aad93f8a92db6d254b746aa94ed6da" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded vergen-lib v0.1.6 [INFO] [stderr] Downloaded strum_macros v0.27.1 [INFO] [stderr] Downloaded strum v0.27.1 [INFO] [stderr] Downloaded simple-error v0.3.1 [INFO] [stderr] Downloaded deranged v0.4.1 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded rust-lib-reference-genome v0.2.1 [INFO] [stderr] Downloaded vergen-gitcl v1.0.5 [INFO] [stderr] Downloaded anstyle-wincon v3.0.7 [INFO] [stderr] Downloaded strum_macros v0.25.3 [INFO] [stderr] Downloaded enum-map v2.7.3 [INFO] [stderr] Downloaded windows-strings v0.4.0 [INFO] [stderr] Downloaded approx_eq v0.1.8 [INFO] [stderr] Downloaded lexical-core v1.0.5 [INFO] [stderr] Downloaded coitrees v0.4.0 [INFO] [stderr] Downloaded clap v4.5.35 [INFO] [stderr] Downloaded lexical-write-float v1.0.5 [INFO] [stderr] Downloaded jiff-static v0.2.5 [INFO] [stderr] Downloaded noodles-vcf v0.80.0 [INFO] [stderr] Downloaded cc v1.2.17 [INFO] [stderr] Downloaded lexical-parse-float v1.0.5 [INFO] [stderr] Downloaded zlib-rs v0.5.0 [INFO] [stderr] Downloaded portable-atomic v1.11.0 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded hashbrown v0.15.2 [INFO] [stderr] Downloaded chrono v0.4.40 [INFO] [stderr] Downloaded ndarray v0.15.6 [INFO] [stderr] Downloaded zerocopy v0.8.24 [INFO] [stderr] Downloaded clap_builder v4.5.35 [INFO] [stderr] Downloaded bstr v1.11.3 [INFO] [stderr] Downloaded nalgebra v0.29.0 [INFO] [stderr] Downloaded itertools v0.11.0 [INFO] [stderr] Downloaded libm v0.2.11 [INFO] [stderr] Downloaded statrs v0.16.1 [INFO] [stderr] Downloaded lexical-util v1.0.6 [INFO] [stderr] Downloaded noodles-bcf v0.77.0 [INFO] [stderr] Downloaded wide v0.7.32 [INFO] [stderr] Downloaded flate2 v1.1.1 [INFO] [stderr] Downloaded indexmap v2.9.0 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded zerocopy-derive v0.8.24 [INFO] [stderr] Downloaded lexical-write-integer v1.0.5 [INFO] [stderr] Downloaded priority-queue v2.3.1 [INFO] [stderr] Downloaded bytemuck v1.22.0 [INFO] [stderr] Downloaded simba v0.6.0 [INFO] [stderr] Downloaded typenum v1.18.0 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded lexical-parse-integer v1.0.5 [INFO] [stderr] Downloaded csv-core v0.1.12 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded jiff v0.2.5 [INFO] [stderr] Downloaded matrixmultiply v0.3.9 [INFO] [stderr] Downloaded libz-rs-sys v0.5.0 [INFO] [stderr] Downloaded miniz_oxide v0.8.5 [INFO] [stderr] Downloaded windows-result v0.3.2 [INFO] [stderr] Downloaded windows-link v0.1.1 [INFO] [stderr] Downloaded exitcode v1.1.2 [INFO] [stderr] Downloaded noodles-bgzf v0.42.0 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded enum-map-derive v0.17.0 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded csv v1.3.1 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded vergen v9.0.4 [INFO] [stderr] Downloaded windows-core v0.61.0 [INFO] [stderr] Downloaded env_filter v0.1.3 [INFO] [stderr] Downloaded env_logger v0.11.8 [INFO] [stderr] Downloaded noodles-bed v0.27.0 [INFO] [stderr] Downloaded noodles v0.100.0 [INFO] [stderr] Downloaded noodles-csi v0.50.0 [INFO] [stderr] Downloaded noodles-tabix v0.56.0 [INFO] [stderr] Downloaded noodles-util v0.69.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded nalgebra-macros v0.1.0 [INFO] [stderr] Downloaded ordered-float v3.9.2 [INFO] [stderr] Downloaded noodles-core v0.18.0 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded strum v0.25.0 [INFO] [stderr] Downloaded rustversion v1.0.20 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:29356a839a4d14451438f794ce8414e707d72405f44418718d724d22562fe786" "/opt/rustwide/cargo-home/bin/cargo" "+36e2b8a3a7aad93f8a92db6d254b746aa94ed6da" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 6f6d3aa82a344e5af7d56cce84506fb7ba208db34f80ba55bd955026c471c157 [INFO] running `Command { std: "docker" "start" "-a" "6f6d3aa82a344e5af7d56cce84506fb7ba208db34f80ba55bd955026c471c157", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6f6d3aa82a344e5af7d56cce84506fb7ba208db34f80ba55bd955026c471c157", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6f6d3aa82a344e5af7d56cce84506fb7ba208db34f80ba55bd955026c471c157", kill_on_drop: false }` [INFO] [stdout] 6f6d3aa82a344e5af7d56cce84506fb7ba208db34f80ba55bd955026c471c157 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:29356a839a4d14451438f794ce8414e707d72405f44418718d724d22562fe786" "/opt/rustwide/cargo-home/bin/cargo" "+36e2b8a3a7aad93f8a92db6d254b746aa94ed6da" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fefadf67f552f4e28a7edc0ef6de833854f7ae2cb89882b35fbd5f304ef70ca1 [INFO] running `Command { std: "docker" "start" "-a" "fefadf67f552f4e28a7edc0ef6de833854f7ae2cb89882b35fbd5f304ef70ca1", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.94 [INFO] [stderr] Compiling unicode-ident v1.0.18 [INFO] [stderr] Checking memchr v2.7.4 [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling libc v0.2.171 [INFO] [stderr] Compiling rustversion v1.0.20 [INFO] [stderr] Compiling libm v0.2.11 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling fnv v1.0.7 [INFO] [stderr] Checking hashbrown v0.15.2 [INFO] [stderr] Checking equivalent v1.0.2 [INFO] [stderr] Compiling strsim v0.11.1 [INFO] [stderr] Compiling ident_case v1.0.1 [INFO] [stderr] Checking zlib-rs v0.5.0 [INFO] [stderr] Checking adler2 v2.0.0 [INFO] [stderr] Checking crc32fast v1.4.2 [INFO] [stderr] Compiling anyhow v1.0.97 [INFO] [stderr] Checking byteorder v1.5.0 [INFO] [stderr] Checking miniz_oxide v0.8.5 [INFO] [stderr] Compiling zerocopy v0.8.24 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Checking bytes v1.10.1 [INFO] [stderr] Checking lexical-util v1.0.6 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking bytemuck v1.22.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Checking indexmap v2.9.0 [INFO] [stderr] Checking regex-syntax v0.8.5 [INFO] [stderr] Checking bit-vec v0.8.0 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling powerfmt v0.2.0 [INFO] [stderr] Checking crossbeam-channel v0.5.15 [INFO] [stderr] Compiling typenum v1.18.0 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking either v1.15.0 [INFO] [stderr] Checking wide v0.7.32 [INFO] [stderr] Checking bstr v1.11.3 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Compiling vergen-lib v0.1.6 [INFO] [stderr] Compiling vergen v9.0.4 [INFO] [stderr] Compiling deranged v0.4.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling syn v2.0.100 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Checking noodles-core v0.18.0 [INFO] [stderr] Compiling itoa v1.0.15 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling num_threads v0.1.7 [INFO] [stderr] Compiling time-core v0.1.4 [INFO] [stderr] Compiling num-conv v0.1.0 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling vergen-gitcl v1.0.5 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking lexical-write-integer v1.0.5 [INFO] [stderr] Checking lexical-parse-integer v1.0.5 [INFO] [stderr] Checking percent-encoding v2.3.1 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Checking ryu v1.0.20 [INFO] [stderr] Checking crossbeam-deque v0.8.6 [INFO] [stderr] Checking libz-rs-sys v0.5.0 [INFO] [stderr] Checking flate2 v1.1.1 [INFO] [stderr] Checking lexical-parse-float v1.0.5 [INFO] [stderr] Checking csv-core v0.1.12 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Compiling portable-atomic v1.11.0 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking log v0.4.27 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Checking lexical-write-float v1.0.5 [INFO] [stderr] Checking ppv-lite86 v0.2.21 [INFO] [stderr] Checking noodles-bgzf v0.42.0 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking ordered-float v3.9.2 [INFO] [stderr] Checking petgraph v0.6.5 [INFO] [stderr] Compiling time v0.3.41 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking bit-set v0.5.3 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Checking itertools v0.11.0 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking bytecount v0.6.8 [INFO] [stderr] Checking noodles-csi v0.50.0 [INFO] [stderr] Compiling thiserror v2.0.12 [INFO] [stderr] Checking lexical-core v1.0.5 [INFO] [stderr] Checking strum v0.25.0 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Compiling serde_json v1.0.140 [INFO] [stderr] Checking clap_builder v4.5.35 [INFO] [stderr] Checking console v0.15.11 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking simple-error v0.3.1 [INFO] [stderr] Checking number_prefix v0.4.0 [INFO] [stderr] Checking rustc-hash v1.1.0 [INFO] [stderr] Checking jiff v0.2.5 [INFO] [stderr] Checking iana-time-zone v0.1.63 [INFO] [stderr] Checking chrono v0.4.40 [INFO] [stderr] Checking noodles-tabix v0.56.0 [INFO] [stderr] Checking noodles-vcf v0.80.0 [INFO] [stderr] Checking regex-automata v0.4.9 [INFO] [stderr] Checking noodles-bed v0.27.0 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking priority-queue v2.3.1 [INFO] [stderr] Checking itertools v0.14.0 [INFO] [stderr] Checking exitcode v1.1.2 [INFO] [stderr] Checking coitrees v0.4.0 [INFO] [stderr] Checking strum v0.27.1 [INFO] [stderr] Checking rustc-hash v2.1.1 [INFO] [stderr] Checking approx_eq v0.1.8 [INFO] [stderr] Checking noodles-bcf v0.77.0 [INFO] [stderr] Checking noodles v0.100.0 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Checking noodles-util v0.69.0 [INFO] [stderr] Checking indicatif v0.17.11 [INFO] [stderr] Checking regex v1.11.1 [INFO] [stderr] Compiling darling_core v0.20.11 [INFO] [stderr] Checking env_filter v0.1.3 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling clap_derive v4.5.32 [INFO] [stderr] Compiling thiserror-impl v2.0.12 [INFO] [stderr] Compiling strum_macros v0.27.1 [INFO] [stderr] Checking env_logger v0.11.8 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Compiling darling_macro v0.20.11 [INFO] [stderr] Checking clap v4.5.35 [INFO] [stderr] Compiling darling v0.20.11 [INFO] [stderr] Compiling derive_builder_core v0.20.2 [INFO] [stderr] Compiling derive_builder_macro v0.20.2 [INFO] [stderr] Compiling derive_builder v0.20.2 [INFO] [stderr] Compiling aardvark-bio v0.10.4 (/opt/rustwide/workdir) [INFO] [stderr] Checking csv v1.3.1 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking multimap v0.9.1 [INFO] [stderr] Checking statrs v0.16.1 [INFO] [stderr] Checking bio v1.6.0 [INFO] [stderr] Checking rust-lib-reference-genome v0.2.1 [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 57.61s [INFO] running `Command { std: "docker" "inspect" "fefadf67f552f4e28a7edc0ef6de833854f7ae2cb89882b35fbd5f304ef70ca1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fefadf67f552f4e28a7edc0ef6de833854f7ae2cb89882b35fbd5f304ef70ca1", kill_on_drop: false }` [INFO] [stdout] fefadf67f552f4e28a7edc0ef6de833854f7ae2cb89882b35fbd5f304ef70ca1