[INFO] cloning repository https://github.com/koisland/rs-cdr-finder
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/koisland/rs-cdr-finder" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkoisland%2Frs-cdr-finder", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkoisland%2Frs-cdr-finder'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 7e8b41ddf07f0c03dcc230ef6978935e952f6485
[INFO] checking koisland/rs-cdr-finder against master#c9af9c1dc85a55e309345030ff9cb7ea247953fa for pr-151146
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkoisland%2Frs-cdr-finder" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/koisland/rs-cdr-finder
[INFO] finished tweaking git repo https://github.com/koisland/rs-cdr-finder
[INFO] tweaked toml for git repo https://github.com/koisland/rs-cdr-finder written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/koisland/rs-cdr-finder on toolchain c9af9c1dc85a55e309345030ff9cb7ea247953fa
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c9af9c1dc85a55e309345030ff9cb7ea247953fa" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/koisland/rs-cdr-finder already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c9af9c1dc85a55e309345030ff9cb7ea247953fa" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/nanoporetech/modkit.git`
[INFO] [stderr]     Updating git repository `https://github.com/logsdon-lab/rs-moddotplot.git`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+c9af9c1dc85a55e309345030ff9cb7ea247953fa" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a1b4c85a84aa19c078df9970bc0394d451859b1c18ac06888e2250bfcdd4fd83
[INFO] running `Command { std: "docker" "start" "-a" "a1b4c85a84aa19c078df9970bc0394d451859b1c18ac06888e2250bfcdd4fd83", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a1b4c85a84aa19c078df9970bc0394d451859b1c18ac06888e2250bfcdd4fd83", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a1b4c85a84aa19c078df9970bc0394d451859b1c18ac06888e2250bfcdd4fd83", kill_on_drop: false }`
[INFO] [stdout] a1b4c85a84aa19c078df9970bc0394d451859b1c18ac06888e2250bfcdd4fd83
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+c9af9c1dc85a55e309345030ff9cb7ea247953fa" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] ce0b580a3fb8a2e42259b1d64e30e64d4ca1b3a243519b5838bc11f2ee191da1
[INFO] running `Command { std: "docker" "start" "-a" "ce0b580a3fb8a2e42259b1d64e30e64d4ca1b3a243519b5838bc11f2ee191da1", kill_on_drop: false }`
[INFO] [stderr]    Compiling find-msvc-tools v0.1.5
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]     Checking memchr v2.7.6
[INFO] [stderr]    Compiling zerocopy v0.8.30
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking stable_deref_trait v1.2.1
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[INFO] [stderr]     Checking getrandom v0.2.16
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[INFO] [stderr]     Checking tracing-appender v0.2.4
[INFO] [stderr]     Checking attohttpc v0.25.0
[INFO] [stderr]     Checking modkit-logging v0.4.5 (https://github.com/nanoporetech/modkit.git?tag=v0.5.0#5120ef76)
[INFO] [stderr]     Checking bigtools v0.5.6
[INFO] [stderr]     Checking statrs v0.16.1
[INFO] [stderr]     Checking bio v1.6.0
[INFO] [stderr]     Checking rust-htslib v0.46.0
[INFO] [stderr]     Checking mod_kit v0.5.0 (https://github.com/nanoporetech/modkit.git?tag=v0.5.0#5120ef76)
[INFO] [stderr]     Checking rs-cdr-finder v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `MinMaxResult`
[INFO] [stdout]  --> src/peaks.rs:1:28
[INFO] [stdout]   |
[INFO] [stdout] 1 | use itertools::{Itertools, MinMaxResult};
[INFO] [stdout]   |                            ^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `plot::Label`
[INFO] [stdout]  --> src/peaks.rs:7:5
[INFO] [stdout]   |
[INFO] [stdout] 7 |     plot::Label,
[INFO] [stdout]   |     ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `MinMaxResult`
[INFO] [stdout]  --> src/peaks.rs:1:28
[INFO] [stdout]   |
[INFO] [stdout] 1 | use itertools::{Itertools, MinMaxResult};
[INFO] [stdout]   |                            ^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `plot::Label`
[INFO] [stdout]  --> src/peaks.rs:7:5
[INFO] [stdout]   |
[INFO] [stdout] 7 |     plot::Label,
[INFO] [stdout]   |     ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seed`
[INFO] [stdout]   --> src/peaks.rs:40:67
[INFO] [stdout]    |
[INFO] [stdout] 40 | pub fn find_peaks(qitv: Interval<u64, &str>, itvs: &ChromBinItvs, seed: u64) -> eyre::Result<()> {
[INFO] [stdout]    |                                                                   ^^^^ help: if this is intentional, prefix it with an underscore: `_seed`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seed`
[INFO] [stdout]   --> src/peaks.rs:40:67
[INFO] [stdout]    |
[INFO] [stdout] 40 | pub fn find_peaks(qitv: Interval<u64, &str>, itvs: &ChromBinItvs, seed: u64) -> eyre::Result<()> {
[INFO] [stdout]    |                                                                   ^^^^ help: if this is intentional, prefix it with an underscore: `_seed`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `peaks`
[INFO] [stdout]   --> src/main.rs:76:21
[INFO] [stdout]    |
[INFO] [stdout] 76 |                 let peaks = find_peaks(
[INFO] [stdout]    |                     ^^^^^ help: if this is intentional, prefix it with an underscore: `_peaks`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `mean` is never used
[INFO] [stdout]   --> src/peaks.rs:11:4
[INFO] [stdout]    |
[INFO] [stdout] 11 | fn mean(data: &[OrderedFloat<f32>]) -> Option<OrderedFloat<f32>> {
[INFO] [stdout]    |    ^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `std_deviation` is never used
[INFO] [stdout]   --> src/peaks.rs:21:4
[INFO] [stdout]    |
[INFO] [stdout] 21 | fn std_deviation(data: &[OrderedFloat<f32>]) -> Option<(OrderedFloat<f32>, OrderedFloat<f32>)> {
[INFO] [stdout]    |    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `peaks`
[INFO] [stdout]   --> src/main.rs:76:21
[INFO] [stdout]    |
[INFO] [stdout] 76 |                 let peaks = find_peaks(
[INFO] [stdout]    |                     ^^^^^ help: if this is intentional, prefix it with an underscore: `_peaks`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `mean` is never used
[INFO] [stdout]   --> src/peaks.rs:11:4
[INFO] [stdout]    |
[INFO] [stdout] 11 | fn mean(data: &[OrderedFloat<f32>]) -> Option<OrderedFloat<f32>> {
[INFO] [stdout]    |    ^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `std_deviation` is never used
[INFO] [stdout]   --> src/peaks.rs:21:4
[INFO] [stdout]    |
[INFO] [stdout] 21 | fn std_deviation(data: &[OrderedFloat<f32>]) -> Option<(OrderedFloat<f32>, OrderedFloat<f32>)> {
[INFO] [stdout]    |    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 27s
[INFO] running `Command { std: "docker" "inspect" "ce0b580a3fb8a2e42259b1d64e30e64d4ca1b3a243519b5838bc11f2ee191da1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ce0b580a3fb8a2e42259b1d64e30e64d4ca1b3a243519b5838bc11f2ee191da1", kill_on_drop: false }`
[INFO] [stdout] ce0b580a3fb8a2e42259b1d64e30e64d4ca1b3a243519b5838bc11f2ee191da1